Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                     <-                                                                                                -----                                              ----------->GT1                                   -----                                          <---------YAB1                <---------TOE1(2)       <---- ---->ZmHOX2a(1)                      --------->TOE1(3)                ------>ZmHOX2a(1)        <---- ------>TOE2(3)                       --------->TOE2(3)       <---------ICU4<-------TEIL      <------ ----DOF2                          <---------CCA1(2)        --------->TOE2(3)             --------->YAB1   cctaaactatttgatggtccatttcactatgaaattcaaatcttaaaattgaaataatcttacattatttctcctaggctcataccatataagcataata  13747600                                                                     <---------AHL20(1)                                                             ----------->GT1                                                      --------------->AGL15                                                      <---------------AGL15                                                     ----------------->AGL3                                                     ----------------->AG                           -       --------->ARR11(3)                            <-----------------AGL2                         -       <---------ARR11(3)                            <-----------------AGL1                        <-      <---------GLK1(1)                              <-----------------AGL3          <---------AHL20(2)  --------->HSFB2a(2)                                ================================================  <---------HSFB2a(2)                                ----------------->AGL2         --------->AHL20(2) --------AHL20(2)                                    ================================================ ---->AHL20(1)                                       ----------------->AGL1    --------->YAB1   ----- ---->AHL20(2)                                <---------AHL20(2)     --------->AHL20(1)         <---- -----AHL20(2)                  <---------AHL20(2)   <-----------------AG <---------AHL20(2)    ----- -----AHL20(1)        <---------AHL20(2)     --------->AHL20(2)      <---------ARR11(3)        ------ ---AHL20(1)          --------->AHL20(2)     <---------AHL20(2)      --------->ARR11(3)  --------->TOE2(3)   ttttatagaaatctttgtttcaaattaaaaattttaaaatgactaaattaaatataccaaaaatggttaaaaatatttcaatgacattaaatctaaattt  13747700          <----------DOF2          --------------->AGL15          <---------------AGL15         <-----------------AGL3     <-----------GT1  <---------YAB1 --------->AHL20(1) <---------AHL20(2) <---------AHL20(1)                                         --------->ANAC55(2)          >>>>>>>>>MYB2 -------->AHL20(2)                                  --------->YAB1                 --------->HSFB2a(2) -------->YAB1                                  --------->AHL20(2)                 <---------HSFB2a(2) --------YAB1                                   <---------AHL20(2)              --------->GLK1(2) ==========================MADS_MADS           --------->AHL20(2)   --------->ZAT6<---------LBD16 =========================MADS_MADS         <---------AHL20(2)    --------->YAB1<---------ARR14(2) ---->AHL20(2)                              --------->AHL20(2)    -------->HAHB4--------->ARR14(2) -----AHL20(2)                          <---------AHL20(2)  <---------ANAC55(2) ------->TEIL ---->AHL20(1)                         <---------AHL20(2)   ----------->GT1    <---------CCA1(2) --->AHL20(2)            --------->TOE2(3) <---------AHL20(2)    --------->ICU4<---------ARR14(1)   tattatatttctcttttaatggagaaaacttaatttagttttttatttatttaattagaattatgtaataatactataaacgtatctggaaaaccaattg  13747800                                                         --------->ALFIN1                                                         <---------REM1(1)                      <----                                        --------->AHL20(2)    <---------ANAC58                  -----                                       <---------YAB1  <---------ANAC46                    <---------ZAT6                                    <---------YAB1     <---------ANAC58                    ----------                                    <---------AHL20(2) <---------ANAC58                --------->ZAT14                               <----------DOF2        <---------TOE2(3)                <---------ZAT14                         <-----------ARR10           <-----------GT1                   --------->REM1(2)                ---------->DOF2<---------DAG2   <----------DOF2<----------DOF2        --------->ALFIN1        ------->MYC3     --------->GLK1(2)   <-----------GT1  <---------ANAC58   <---------HSFB2a(2)        <-------MYC3    <---------GLK1(2)   <-----------GT1<---------CCA1(2)     --------->HSFB2a(2)   aattgagacacatggatggaaagatagaatctactttttttattatttatctttttaacgtgtagctttctctccctcttcttccagagtgtagggttaa  13747900                                                        <---------ALFIN1                                                       *TSS                                                      --------->ANAC58                                                      --------->ANAC58                                            ------------>CBF                                            <---------ATHB12                                           --------->ANAC58                <-----------GT1 -----ANAC55(2)                            --------->ANAC46         <----------DOF2 ---->ANAC55(2)       --------->AHL20(2)   --------->ANAC58      <---------ALFIN1 ->GT1                ----------->TBP   --------->MYB46(3)      <---------At4g35610   gtaagtgtctctccctctctacctataaatatgtgtgtgtaaaccactcaattcactcgcactctcagcactttcatttacctctcaaaactgcttcata  13748000                                                              <---------WOX13(1)                                                            --------->ATHB12                                                           <---------ATHB12                                                       --------->MYB46(3)                                                       <---------ATHB12                                                      -------->P                                                      ------>MYB46(1)                                                     --------->MYB55(1)                                                    <---------MYB111(1)                                                    --------->MYB46(3)                    --------->ATHB12                                                    --------->AtMYB61                    <---------YAB1                                                    <---------MYB111(2)               <---------AHL20(1)                                                    <---------MYB55(2)                --------->ARR11(3)                                                    <---------MYB46(2)                <---------ARR11(3)                                                    --------->DEAR3(1)                --------->AHL20(1)                                                 --------->ANAC46              --------->TOE2(3)    < --------->TOE2(3)                  --------->DEAR3(1)------>MYB83     <---------YAB1--------->AHL20(2)   aaacctcgataccatctaagagttactcccatatttcatcgcccatgtaatacaccaaccattcattgattttctcattaatctcaaatatatcattgga  13748100                                  <---------ARR11(3)                                   <-----------HVH21                                  <---------ARR14(2)             --------->ZAT6    ------->TEIL                                  --------->ARR14(2)  --------->RVE1(1)            <---------ARR14(2)                                 <---------CCA1(2)<---------AHL20(2)               --------->ARR14(2)    <----------DOF2     <-------GAMYB ------>ZmHOX2a(1)         <---------YAB1    <---------CCA1(2)   <---------DAG2      <---------ANAC58           --------->AHL20(2)      <---------ARR14(2)    ----- -----------GT1        <---------ANAC58         <---------AHL20(2)        --------->ARR14(2)  <------   ttcaaccttttcattcgattgaatttcgttgcaccatatcctctgtatatataaaaatatcgagttatcagtagcatatttgttgtatctgtcatataca  13748200                                                               ---------->ID1                    ----                                                              <-----------GT1                   <----   --------->YAB1     <---------ARR11(3)                  <---------AHL20(2)            ---------->DOF2  --------->ICU4      --------->ARR11(3)          <---------AHL20(2)    <---------HSFB2a(2)  --------  <---------ATHB12   <---------CCA1(2)            --------->AHL20(2)    --------->HSFB2a(2) <-------- ---->TOE2(3)<---------YAB1           --------->ANAC58 <---------AHL20(1)          --------->ZAT18 -TEIL      <---------GLK1(2)         --------->ANAC58 --------->AHL20(1)   ---------->DOF2 ---------   tcaaatgatgaactgattcttgtatatctttctactgggaacgaaattttgttttaatattttttttcgtttttgtagaaaagagtgagccaaagatata  13748300                                                                                                =====                                                                                               ------                          --------->ANAC58                                                    <------                   ---------->DOF2                                                            -------                --------->ANAC58                                                              <------         <------ZmHOX2a(2)--------->ANAC58                                                   <-------        --------->ARR11(3)----------->GT1                                               <-----------RAV1(1) ----->ANAC46   --------->ANAC58                                                    --------->ARR11(3) -----LBD16  <---------STY1(2)              --------->CCA1(2)                     --------->DAG2----- ->CCA1(2)   --------->STY1(2)             --------->ARR11(1)               --------------->AGL15 -ARR11(3)  --------->ANAC58               <---------ARR11(3)               <---------------AGL15 >ARR11(3)  --------->ANAC58           ---------->DOF2         <---------YAB1   ---------->DOF2<-----   cggagggatagatcaagctagcaaaggaacgaaaaacataaaaaagatttgatttttctgagtttatcacagccaaaacttcaaaaggtattgttggatc  13748400         ------>ZmHOX2a(1)   <---------MYB52(1)                                                  ------>MYB46(1) ===============HOX2a_HOX2a                                        ------>MYB83 --->GLK1(1)                                                       ------>MYB46(1)--------->YAB1 ---AGP1--------->TOE2(3)                     <---------YAB1       -------->P    <---------YAB1 -->ARR11(3)                             ------->TEIL             ------>ZmHOX2a(1) ---ARR11(3)                        -------->HAHB4           <---------CCA1(2) --------->YAB1 --CCA1(2)                          <---------ICU4       <----------DOF2    ---------->DOF2 ->ZmHOX2a(2)       <---------YAB1 --------->ICU4 --------->AHL20(2)   ------>MYB83 ----GLK1(1)     <---------AHL20(2)<---------ATHB51   <-----------GT1<---------MYB59            -----   tcttcgttatcctttgtattttatgtttatgttcttaataatgcatctacgattatatactttatatcctaccaaatacaaagatgataacaaatagtgg  13748500  Previous    Next  AGI:  At2g32370.1    Description:  DNA binding / transcription factor. similar to homeobox-leucine zipper family protein / lipid-binding START domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G05230.2); similar to homeobox-leucine zipper family protein / lipid-binding START domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G05230.3); similar to homeobox-leucine zipper family protein / lipid-binding START domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G05230.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66212.1); similar to homeobox protein (GB:AAB37230.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24141.1); contains In Range:  from: 13747955    to: 13753363    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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