Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  >>>>>>>>>>WRKY11                                                                >>>>>>>>>>WRKY6                    --                                                               --------->WRKY12                    <-            <------ZmHOX2a(1)   <---------AHL20(2)             --------->WRKY38(1)                 --      ---------->DOF2           --------->AHL20(2)           --------->At4g35610                   --    <---------YAB1 <---------ARR11(3)                     <--------P ---------->DOF2              <--  --------->YAB1   --------->ARR11(3)                  <---------TOE2(3)                 <---------ANAC58 <---------YAB1    --------->GLK1(2)                   <---------TOE1(3)       <-------TEIL       --- ----------->GT1   <-----------ARR10            <-------TEIL <---------At4g35610         <---------ANAC58 ------->YAB1 ----------->GT1   --------->AHL20(1) <---------At4g35610        --------->CCA1(2)   <--   aaaatgataaaagaggaagaaaatctcatccaaattttttgactaatatgttcatctaaggtaagttgacccaaagtgagatacattgtgttcttgccta  13738900                                              <---------AHL20(2)                                              --------->AHL20(2)                                              --------->AHL20(1)                                              <---------AHL20(1)                                             <---------AHL20(2)                                             --------->AHL20(2)    <---------YAB1                  <---------ARR11(3) ------>HAHB4                       --------->AHL20(1) --------ICU4              --------->YAB1 --------->AHL20(2)                            --------->YAB1 ------->YAB1            --------->ANAC58 <---------AHL20(2)                  <---------AHL20(2) ------->ATHB12          --------->ANAC58--------->AHL20(2)                  --------->AHL20(2) -------ATHB12           --------->AtLEC2<---------AHL20(2) <---------GLK1(1)<---------AHL20(2) ------>ICU4  --------->GLK1(2)     <---------AHL20(1)      --------->GLK1(1)<---------AHL20(1)   <-- -------YAB1 <---------GLK1(2)   --------->YAB1<---------AHL20(2)         --------->WOX13(1)    -----   atgattactatagtagaatctcattccaagcacaacaatatttttaaattaatttcaaggggaattccctaattttcaattaatttgtatttataacacc  13739000                            --------->HSFC1(2)           <---------RVE1(1)                            <---------HSFB2a(1)         --------->ARR11(3)                 <---------AHL20(2)                     <---------ARR11(3)                         --                 --------->ATHB12              <---------AHL20(1)                                  <-        <-----------GT1     --------->HSFB2a(1)--------->AHL20(1)                                  <-    --------->ARR11(3)      <---------HSFC1(2) --------->AHL20(2)      --------->ATHB12            --    <---------GLK1(2)     ---------->DOF2      <---------AHL20(2)      --------->YAB1           -----    <---------ARR11(3)---------->DOF2      <---------AHL20(1)         <---------ATHB12          -----  ----------->ARR10<---------WOX13(1)      --------->AHL20(1)     ------------>CBF           --------  <-------TEIL  --------->AHL20(2)         --------->AHL20(2)    --------->TOE2(3)          <-------- <--------P  --------------->AGL15         <---------AHL20(2) <-----------GT1          ------------>CBF -------TOE2(2) <---------AHL20(2)      <---------ICU4  <---------GLK1(2) <---------TOE1(2) --------- ---->TOE2(2)<---------------AGL15      xxxxxxxxxxxxxxxx>smallRNA(s)--------->WOX13(1)--------->ZAT6   taggtagatttttctctattaattgaaagaaagttccattactaattaattaattagagatttttaacttcaatcataggtgctaataacacaattaata  13739100  <---------AHL20(1)  <---------AHL20(2)  --------->AHL20(2) ------->AHL20(2)                                       <---------AHL20(2) --------AHL20(2)                                <---------AHL20(2)                       <---------ARR14(2) --------AHL20(1)                               --------->AHL20(2)                        --------->GLK1(2) ------->AHL20(1)                           --------->AHL20(2)    --------->DOF5.7(2)     --------->ARR14(2) ---->YAB1                           ----------->GT1    --------->AHL20(2)               <---------GLK1(2) ---->AHL20(2)         <-----------GT1      <---------AHL20(2)   <-----------HVH21<------ZmHOX2a(2) ->YAB1  <----------DOF2      --------->AHL20(2)<---------AHL20(2)<---------MYB52(1)     <---------ARR14(2) -AHL20(2)        <----------DOF2   --------->DAG2   --------->AHL20(2)   ===============HOX2a_HOX2a< >AHL20(2)        <---------DAG2   ---------->DOF2  --------->AHL20(2)    ------>ZmHOX2a(1)      <---   atattttatttctttcattcctttttcaccattttaaaaaagtttattaattaaataaaaaaataagcgttacctccttcgacgatcagacgattctgcc  13739200                                                                                 <---------HSFC1(2)                                                                                 <---------HSFB2a(1)                                                                                 --------->HSFC1(2)                                                                                 --------->HSFB2a(1)                                                                                <-----------ARR10                                                                                <---------ARR11(3)                                                                                --------->GLK1(2)                                                                                --------->ARR14(2)                                                             --------->ZAT14    <---------ARR14(2)                            --------->ARR14(2)           --------->AtMYB61     <---------GLK1(2)                            <---------ARR14(2)        --------->ANAC46    <-----------HVH21             <---------ANAC58                         --------->ANAC58  --------->SPL7             <- <---------YAB1     --------->ANAC58                  <---------ALFIN1 <---------MYB52(1)        ---- -----------HVH21   --------->ANAC58                  --------->ANAC58<-----------HVH21      -------- ---------CBF<---------ANAC58   ------>ZmHOX2a(1)   <---------ALFIN1  <---------SPL7       <---------   attgtcatacatttggcttagctcgtaacgtttcctctctctctctctctcgttccacaccactacattctccgtccgtcagaatcttcgaatttacctg  13739300                                                                   --------->MYB46(3)                                                                  ------>MYB83                                                                  ------>MYB46(1)                                                                 ----------->RAV1(1)          -------                                                                 --------->MYB52(1)           <------                                                                ------->GAMYB                 <------                                                               --------->MYB46(3)             -------    --------->WOX13(1)                                       <---------DOF5.7(2)             --------  ------------>CBF                      <-------TEIL       --------->DOF5.7(2)               <------- ------>NtERF2              ---------->DOF2                <---------MYB52(1)                <------- --------->LBD16<---------ANAC55(2)  <---------MYB46(3)   --------->TOE1(3)                  -------- --------LBD16  --------->ANAC55(2)<------NtERF2          --------->TOE2(3)                  <------- ----->ARR14(2) <---------ANAC46  --------->LBD16       ---------->ID1            <---------ETT(2) --->RAV1(2) ------>ZmHOX2a(1)  <---------LBD16    <---------ARR11(3)             --------->ZAT18  <- --GT1<---------ATHB12     <---------REM1(1)       --------->ARR11(3)--------->At4g35610    <------ZmHOX2a(1)   ttccgccaatcactcctcgcgtaatggagttgaagccggaggttcaatatggagatttttcgttaaccaacagcttagtgaatgtggacaaggaggacct  13739400       <------ZmHOX2a(1) -->HSFC1(2) ---HSFC1(2)                <-------TEIL ---HSFB2a(1)           <---------TOE2(2) -->HSFB2a(1)           <---------TOE1(2) ->ARR14(2)            <-----------RAV1(2) --ARR11(3)          --------->ANAC58                    ----------->HVH21          <----------DOF2 ----ARR10<---------At4g35610                          <---------ANAC55(2)        --------->At4g35610 ->ARR11(3)          --------->ANAC58                  --------->ANAC55(2)   --------->CCA1(2)  <---- --ARR14(2)   <---------ARR14(2)              --------->AtMYB61       ----------->GT1       <-------- --------SPL7 --------->ARR14(2)          ----------->HVH21          <---------AtMYB61  <---------At4g35610   tcgtagggaggaagcagatagcgacgcaggttcagtgattatctgcgaccattcgatatgtgatagtggtgatggtgatatatgcgctgtagcagattat  13739500             --------->ALFIN1            --------->ATERF1(1)            <-------GAMYB            <------NtERF2                                                              ----------->RAV1(2)           <---------MYB46(3)                                                          --------->ZAT2          <---------ANAC58                                                             <---------At4g35610          <---------RAP2.6(2)                                                          <---------ZAT2          <---------DREB2C(2)                                                   <---------ARR14(2)          <---------DEAR3(1)                                                    --------->GLK1(2)   -          <---------DEAR4(1)                                              --------->TOE2(2)       ---          <---------ANAC46                                                --------->TOE1(2)       ---       --------->ALFIN1                                                  <---------ANAC58         <--       <---------DEAR3(1)                    <------ZmHOX2a(1)           <---------ANAC46         <--     <-----------RAV1(1)           --------->ZAT2                        <---------TGA1a         <---     --------->ALFIN1              --------->At4g35610          <---------TOE1(3)      --------->At4g35610 <---------ANAC58   --------->MYB52(1) ----------->RAV1(2)      <---------YAB1  --------->ARR14(2)<-- <---------ANAC46  ----------->HVH21--------->ATERF1(1)         <---------TOE2(3)    <-----------RAV1(2) <---------ANAC58 --------->ATERF1(1) ------>NtERF2     --------->DAG2   --------->TGA1a        ----- -----YAB1<---------ANAC58         <---------At4g35610 ============================bZIP_DOF     <---- -GLK1(2)<---------ABI4(1)         <---------ZAT2      ---------->DOF2   <---------ANAC58      ------   gttgagtgtgtggcggtggagacgacggagaagttggagctgcctgaggaatttgcgaaaagcgttatggttctaacgtgcgaatccacagctgagggtg  13739600                                        --------->ANAC58                                       <---------TOE2(2)                                      <-----------RAV1(2)                                   ----------->HVH21                                  ------->TEIL                                  <-----------HVH21                       <---------ICU4                               --------->ANAC46                           <--------HAHB4                               --------->ANAC58                          --------->ICU4          --------->ZAT18      ========================================MYC_MYB--------->MYB59          <---------ZAT18      <---------ANAC55(2)                     <---------------AGL15       <---------bZIP60(2)     --------->ANAC55(1)                     --------------->AGL15       <---------ANAC46        --------->ANAC55(2)                    <-----------------AGL3 ----->ZmHOX2a(2)              --------->TGA1a                        ----------------->AGL2 ------>ARR14(2)               <---------O2                           ----------------->AGL1 ------>ARR11(3)               --------->O2                           <-----------------AGL2 -------ARR14(2)               <---------TGA1a                        ----------------->AGL3 -------AGP1                   ==========================================MYC_MYB<------ZmHOX2a(1) ------CCA1(2)                 --------->ANAC58                   --------->MYB52(2) -------ARR11(3)          --------->At4g35610                   <---------MYB52(1)            <------ ------>ARR10             <---------At4g35610                   <--------P--------->ATHB51    <------ -----MYB46(3)--------------------->WRI1--------->ANAC58       <-------GAMYB--------->ICU4    <------ --->ALFIN1 ------->TEIL  --------->ZAT14       ------>ZmHOX2a(1) --------->MYB59        --------->MYB52(2)   gatcttgtgatgtgtacttagttggcactgctcacgtatcacaggtaatcctcgttttcaatttcggttagttccataattaggaatttgtaagttgctt  13739700                                                                                            ---------                                                                                            <--------                                                                                            <--------                          <------MYB83                                                      ---------                          <---------MYB46(3) --------->ATHB12                               <--------         ----------->HVH21----------->GT1    -------->HAHB4                   --------->ATHB12       <------MYB46(1)    <------MYB46(1)    <---------ICU4            <-----------GT1      ---------       <------MYB83     <---------WOX13(1)  --------->ICU4            <-----------GT1    --------->YAB1 ---ANAC46            --------->ATHB12      <---------YAB1        <----------DOF2        --------->AHL20(2) ---ANAC58           <---------YAB1       --------->YAB1          <---------DAG2        <---------YAB1 ---ANAC58  <---------ANAC46      <-----------RAV1(1)            <---------DAG2 <---------WOX13(1)   cttagaatttggtgactggttttgtgattggttgaaatgttggataatgatggaaacttttcaatcccctttttaacccttgattggactataatatatt  13739800  Previous    Next  AGI:  At2g32320.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G31580.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71745.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62815.1); contains InterPro domain tRNAHis guanylyltransferase (InterPro:IPR007537) Range:  from: 13733896    to: 13738844    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g32340.1    Description:  TraB family protein. similar to TraB family protein [Arabidopsis thaliana] (TAIR:AT1G05270.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24159.1); contains InterPro domain Pheromone shutdown-related, TraB (InterPro:IPR002816) Range:  from: 13739324    to: 13741611    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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