Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ----->ANAC58 ------ANAC55(2) ----->ANAC46                                                                                    <--- ----->ANAC55(2)                                                                                 ---- ----->ANAC55(1)                    <-----------GT1                                      --------->ANAC46 ----->ANAC58                    --------->YAB1                             <----------DOF2   ------- -----LBD16               <---------ALFIN1                      <---------ARR11(3)   <-----------GT1 ----HVH21     <-----------GT1 --------->AHL20(2)   ----------->HVH21    <---------AHL20(2)----------   cggaacatagaacttatttactacttctccacttaaaataactaaattggcgaaatgacccctcaatttcttcatttactttcaatgttacccgaaagtt  13733500                                                                                    ------>NtERF2                                                                                   --------->DEAR3(1)                                                                                  <------NtERF2                                                                                 ------>NtERF2                                                                                 <---------RAP2.6(3)                                                                                --------->ATERF1(2)                                                                                --------->ANAC46                                                                                --------->RAP2.6(2)                                                                                <---------ATERF1(2)                                                                                --------->DEAR3(1)                                                                               --------->ATERF1(1)                                                                               --------->RAP2.3(1)                                                                               <---------RAP2.6(2)                                                                              <---------ATERF1(1)   <                                                                            --------->ATERF1(1)     -                                                                            <---------MYB52(1)  -----                                                                           <---------ATERF1(1)  -----                                                                           <-------GAMYB        <----                                                                           --------->At4g35610 ------                                                                           <---------At4g35610 ------                                                                          <---------MYB46(3)   ------                                                                      =============MYC_MYB   --------    <---------ANAC58                                    <-----------GT1--------->DEAR3(1)    ------>NtERF2    <---------ANAC46                      ------>MYB46(1)             --------->MYB46(3)    ---------    <---------ANAC58                      ------>MYB83 --------->YAB1 --------->ANAC58   --------->ARR14(2) ------AHL20(2)                         --------->MYB46(3)            --------->TGA1a    <---------ARR14(2) ----->AHL20(2)   <----------DOF2       <---------MYB46(2)            --------->ANAC58  <---------GLK1(1) ---->GT1         <---------DAG2       --------->ANAC46<---------ICU4 --------->ANAC46--------->MYB46(3) >DOF2     <----------DOF2           <-----------GT1  --------->ICU4<---------ALFIN1----------->RAV1(1)   taattttcttgtactttcgactttttcatttctccaaattcaccaaacactctctaattatcaactctccccacggccgttgccgccaacaaatccgccg  13733600                                                        ----------->GT1    --------->LBD16                                   <---------At4g35610          <------ZmHOX2a(1) ---------ARR14(2)                             --------->At4g35610              <-----------RAV1(2) -------->ARR14(2)                             --------->ZAT2                --------->ANAC58 ->NtERF2                                      <---------At4g35610           --------->ANAC58 ---->LBD16                                    <---------ZAT2         <---------ZAT2 --NtERF2                                   --------->ZAT14           --------->ZAT2   <---------ARR14(2) --->RAP2.6(2)                              <---------ZAT14           <---------At4g35610 --->DEAR3(1)                      <---------ETT(2)   --------->At4g35610--------->At4g35610 --->RAP2.3(2)          --------->TOE2(3)  --------->ALFIN1           --------->At4g35610 ->LBD16             --------->ARR14(2)   --------->ZAT14           <-----------RAV1(2)--------->GLK1(2) >ANAC46             <---------ARR14(2)   <---------ZAT14<-----------HVH21 ---------->DOF2    <------   cgaatccccaaatgtaatctccataacctctactatatcgacactgtgcagcttagagctgtcaaatggtccagcagcaaagccaggagaaactggaaac  13733700                   --------->ANAC58                   --------->ANAC58              <---------TOE2(3)             ---------->DOF2             <---------DOF5.7(2)                              <---------AHL20(2)          --------->TOE2(3)                <--------P         --------->AHL20(1)         --------->ATHB12                 <-------GAMYB      <---------AHL20(2)         <---------ICU4                 <---------TOE1(3)    --------->AHL20(2)         --------->YAB1                 <---------TOE2(3)<---------YAB1         <--------HAHB4            <----------DOF2      --------->AHL20(2)        <---------YAB1          <------MYB83<---------MYB46(3)--------->AHL20(2)        --------->ICU4          <------MYB46(1)         <---------AHL20(2) ---GLK1(1)--------->DOF5.7(2)--------->ALFIN1     <---------YAB1            *TSS   --------->AHL20(2)   ctcttagaccatcattaacgcaggcctcttaggtgggtttttagggttgttttgtgattaaaattaaattgcaaattgggctaaaatttaagaggcgctc  13733800                                  ======================MYC_MYB                                  --------->bZIP60(1)                                  >>>>>>>>>>HY5                                  --------->ANAC55(2)                                  --------->TGA1a                                  <---------bZIP60(2)                                  ============================================bZIP_DOF                                  <---------TGA1a                                  <---------O2                                  --------->O2                                  <---------ANAC58                                  <---------ANAC58                                  ============================================bZIP_DOF                                  <---------bZIP60(1)                                  <---------ANAC55(1)                                 ----------->bZIP911(1)                                 ----------->STF1                                 <-----------------------TaNAC69(2)                                 ----------->bZIP910(1)                               ----------->TGA1                               ----------->HVH21                              --------->At5g28300                              <------NtERF2                              --------->ATERF1(1)                             <---------ATERF1(1)                             <---------DEAR4(2)                            --------->ALFIN1                            <---------ANAC46                            <---------DEAR3(1)                                                  *TSS                  <---------YAB1<---------TGA2(2)                                           <--------                 <---------AHL20(2)                                                      <---------ANAC46                 --------->AHL20(2)    <---------ANAC58                   ----------->GT1<---------ANAC58                 <---------AHL20(1)    <---------ANAC58                 ---------->DOF2  <---------ANAC58                 --------->AHL20(1)    <---------ANAC46                 ===========================bZIP_DOF                <---------AHL20(2)<---------ANAC46          ------------------------>ANAC81 <--------                --------->YAB1<-----------HVH21 <-------GAMYB      ================================bZIP_DOF                --------->AHL20(2)<---------ANAC55(2)      <------------CBF              <---------TGA1a        <----------ID1     <---------ABI4(1)   --------->MYB52(2)  ---------->DOF2       <---------O2   ttatataagagggccaaattatattaagaggcggtgacgtggcatgggtgagttgtctgaaaattgaagaaaaggaaagaaaaaaaaacagtcgtgggtt  13733900                                                      --------->At5g28300                                                    <---------DEAR3(1)                      <------ZmHOX2a(2)                                                  ------>NtERF2                            --------->ARR11(3)                                                  --------->MYB52(1)           <------ZmHOX2a(1)    <                                                 ----------->HVH21             ====================HOX2a_HOX2a                                                 --------->ANAC46           =======================HOX2a_HOX2a                                                 --------->DEAR3(1)         <------ZmHOX2a(1)     <-- -TOE2(2)      <---------ETT(2)            <---------GLK1(1)              --------->ALFIN1 <---------ARR11(3) -TOE1(2)      --------->ETT(2)            --------->ARR14(2)   --------->At4g35610    <------ZmHOX2a(1)   tttgtttcttcagtctgtcgacgcttgctctctctctatttatcgaattccccgacggtgaacatcaccagacaaggaggaggagactaggaagatcgat  13734000                                                                <---------ANAC55(2)                                                                <---------ANAC58      --------->YAB1                                            <---------ANAC58      --------->TOE2(3)                                         <---------ANAC46 <---------ATHB12   --------->WOX13(1)         <---------AHL20(2)                --------->ANAC55(2) <---------YAB1               <---------YAB1                    <---------ANAC55(1) -----------GT1         <--------P                        <---------AHL20(2)   --------->WOX13(1) -------AHL20(2)      ----------->GT1             <----------DOF2           <-----------HVH21   -----   tttatcaatctcaattgaacaagatggtaagttttattgtttctcagttcatctttttattcaattacttgttttctatgtcaatcgtttgatttatctt  13734100                                                                                       <---------WOX13(1)                                                                             <---------WOX13(1)                                                                           --------->ATHB12           ----------->GT1               --------->YAB1                   <---------YAB1  <---------YAB1       <---------TOE1(3)          <---------MYB46(3)                  <---------YAB1<---------YAB1 <-       <---------TOE2(3)        <---------MYB52(1) ------>ZmHOX2a(2)--------->AHL20(2)<---------ANAC58    ------>ZmHOX2a(1)          <-------MYC3   <---------WOX13(1)    <---------AHL20(2)<---------ANAC58 ------>RAV1(2)                ------->MYC3<---------YAB1          <---------AHL20(2)--------->ATHB12   ctggtccttgaggttgtaaattgggatagaccacgtttgtttattgtaattgatcccctaagctctaaaattatttttcattgattttgattgcgattag  13734200                                                                                         <---------ANAC58                                                                                         <---------ANAC46                                                                                         <---------ANAC55(2)                                                                                         <---------ANAC58                                             >>>>>>>ZML2                                 --------->ANAC55(2)                                        <------MYB46(1)                             <---------RVE1(1)               --------->CCA1(2)        <------MYB83             <---------YAB1     <---------CCA1(1)  ------->TEIL--------->ARR11(3)   --------->ATHB12   <---------YAB1               --------->ARR11(3) --------YAB1 <---------ARR11(3)  <---------YAB1----------->GT1----------->GT1     <---------ARR11(3)   tatgaatctatttggagatatatggttttcgatgctatgatttggttctagggtttattttagaattgttatttcagagtaattagatatttcgtgattt  13734300                                                       <---------ANAC58                                                       <---------ANAC46                                                       <---------ANAC58                                                   <---------ANAC58                                 -                                                   <---------ANAC58                         <--------                                              --------->ATHB12                              <--------                                              <---------ICU4                               <---------DAG2                                              <--------HAHB4                  <----------DOF2      --                                              --------->YAB1                <------------------------ANAC81                                             --------->ICU4              <----------DOF2   ----------                             --------->ATHB12<---------ATHB12         <-----------GT1   <-----------GT1      <---------GLK1(1)   <----------DOF2    <---------YAB1     <----------DOF2    <----------DOF2 <-  <---------ATHB12    ---------->ID1   <-----------ARR10       <------------------------ANAC81  <----   ctcaatcgatttctcaatagatttgtctctttgatttggctaatctaatcattacttgcgttctgtcttttttttcttttcttttcttttttaccttttt  13734400  Previous    Next  AGI:  At2g32310.1    Description:  similar to transcription factor [Arabidopsis thaliana] (TAIR:AT1G05290.1); contains InterPro domain CCT (InterPro:IPR010402) Range:  from: 13731471    to: 13733451    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g32315.1    Description:  other RNA Range:  from: 13733376    to: 13733777    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g32320.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G31580.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71745.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62815.1); contains InterPro domain tRNAHis guanylyltransferase (InterPro:IPR007537) Range:  from: 13733896    to: 13738844    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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