Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     --------->ARR11(3)                                  --------->RVE1(1)                                <---------AHL20(2)                          <---------ANAC46                  --------->DEAR3(1)                                               --------->YAB1                <---------At5g28300<---------ARR11(3)                              <-----------GT1       <---------ANAC46 --------->LBD16                                ---------->DOF2              <      <---------LBD16 <---------LBD16--------->TOE2(3)              --------->HSFB2a(2)             - >TOE1(2)    <-----------HVH21 --------->YAB1     ---------->ID1    <---------HSFB2a(2)        ------   aaattactcgcgcatagtcacagccccggtgtataaaaatctcaatgttcttgttgttttgtgctaagttctgaaaagttttgaataacaacacatacaa  13729100                       ----------->GT1         <---------ANAC55(2)                                     <---------------AtSPL8         <---------ANAC46                          <---------REM1(2)      <---------MYB52(1)                           --------->ZAT14 ---------ZAT14      <---------ANAC46              --------->ZAT18   ------->TEIL -------->ZAT14  --------->At5g28300               <---------ZAT14   <-------TEIL ---->DOF2      ----------->GT1                   <<<<<<<<<<<<<<<<<LFY                  ----------->GT1   agtactctgttacttatactgtaacttgtaacttccattacagagagagagactacactggctctataatgtacatgaagatgtgtaattgtgtaatttc  13729200                   <---------At4g35610                   ----------->RAV1(2)            <-----------GT1         --------->YAB1                                                      <---------ZAT14       <---------TOE2(3)                                        <----------DOF2       <---------YAB1                                          <---------ANAC58      <---------AHL20(2)                                 --------->ARR11(3)<---------MYB52(2)      --------->AHL20(2)                            ---------->DOF2    <-------TEIL            ------      --------->YAB1                        ---------->DOF2    <---------ANAC58                <-----   tcttgtattaatattaacttcacctgttcttgtaagagataaactataaagcattaaaggaacttgctttaggtgcaactaaactggttttggacaagtg  13729300                                          <---------------AGL15                                          --------------->AGL15                                         ----------------->AGL3                                         ----------------->AGL2                                  <------MYB46(1)                        <-------TEIL        <---------YAB1            <------MYB83 ---------->DOF2    ------>ZmHOX2a(2)           <------        ------->TEIL              ----------->GT1           <---------ANAC58                 -------- ----------->RAV1(1)              <---------ANAC55(2)       <---------ANAC58                <-------- --->ALFIN1                      --------->MYB59            --------->ANAC55(2)   --------->ZAT6 ----REM1(1)     ----------->GT1 --------->MYB46(2) ---------->DOF2 ----------->RAV1(1)     ---------   tagcaacatgaacattgtctggttttatagtggattaggtaaaaccaaaaaaagaaaagcttacttgatccaacatacatactaactctcaacagataca  13729400                                                   <-----------GT1                                                  <---------AHL20(2)                                               <---------AHL20(2)                                               <---------ICU4                                               --------->ATHB51                                               <--------ATHB1--------->WRKY12                                               --------->AHL20(2)                           --------->TOE2(3)  <---------ATHB51                   -------->P       --------->GLK1(2)        --------->WRKY38(1)                   ------>MYB83    <---------ARR11(3)        ----------->HVH21      ----------->HVH21 -TEIL   <---------YAB1 <---------CCA1(2) ------------>CBF <----------DOF2    --------->ANAC58 ->CCA1(2)         ------>MYB46(1) <---------GLK1(2)<-----------GT1           --------->ANAC58 -ARR14(2)    <-----------GT1      --------->ARR11(3)   ------>ZmHOX2a(1)     <---------ALFIN1     -- >ARR14(2)--------->AHL20(2)   ---------->DOF2<---------ATHB12   ----------------->AGL2        <-----   aacacaagtttattatttaccaactcttatctcaaaagattcttctcaataatttatcctcctttgacccctatatagacacacatttgacaccatatgt  13729500                                                                     <------ZmHOX2a(1)                                                                    ----------->GT1                                                             <----------ID1                                                           ---------->DOF2    *TSS   --------->YAB1------>ZmHOX2a(2)             --------->LBD16 --------->CCA1(2)   --------->HSFB2a(2)   --------->ANAC46    <---------ARR11(3)             --------------->AGL15       <---------ICU4 ------->AtLEC2 <---------CCA1(2)                     <---------------AGL15     <---------ARR11(3) ------HVH21  <---------ICU4  <----------DOF2     <-----------GT1---------->DOF2--------->ARR11(3)   catgcacaaaacatcatcatctcttgatctatctttcagttctcttgtcaattttcccccaaaaagaaaaaggatataagaagataatggcatctagaga  13729600                                                                                   <------MYB46(1)                                                                                 <--------P                                                                               --------->MYB55(2)                            <---------ZAT18                                    --------->ATHB12                <-----------HVH21--------->ATHB12                              <---------MYB46(3)         <---------GLK1(2)  --------->ZAT14                           <---------MYB46(3)         <---------ICU4     <---------ZAT14         --------->At4g35610    ------>ZmHOX2a(1)<------ZmHOX2a(1)      --------->YAB1 --------->ANAC46       --------->ZAT6           <---------AtMYB61  <---------ZAT14     <---------YAB1 ------>ZmHOX2a(1)     <-----------GT1         <---------AtMYB61<------MYB83    <-   aatgctgatcataatctcggtcctcgctactacactcattggtttaacagtagctactgaccataccattggtggtcctagtggttggactgtaggagct  13729700                                                                       --------->YAB1                                                                       --------->TOE2(3)                   <------ZmHOX2a(1)         --------->YAB1         <---------CCA1(2)               <------NtERF2     <-------GAMYB         --------->CCA1(2)            --------->At4g35610 <---------MYB46(3)    <---------ARR11(3)            <---------At4g35610 <-----------RAV1(1)   --------->ARR11(3)        <---------YAB1 --------ZAT6  --------->At4g35610         --------->GLK1(2)<-----------GT1   <----------DOF2    ----   agtcttcgaacttgggctgcaggacaaacatttgctgttggagacaatcttggtaagatatatcacatctctatcttaaactttgattcaaaaaaaaaaa  13729800                                                      <---------ANAC58                                                      <---------ANAC58                                                  --------->At4g35610                                                  <---------At4g35610                                                  <---------ZAT2                                                  --------->ZAT2<---------bZIP60(1)                                               ----------->RAV1(2)  <-------GAMYB                          <---------ANAC46   ------>MYB46(1)    --------->O2                       <-                          <---------ANAC58   ------>MYB83       <---------O2                    <----                          <---------AtLEC2   -------->P         --------->bZIP60(1)             -----          --------->AtMYB61             <-----------GT1      --------->ANAC46           --------->ARR14(2) ------>DOF2              <---------ANAC58  ------>ZmHOX2a(1)----------->HVH21          <---------ARR14(2)   aaagactaaaaaccaaaactctgtttttgcttgaaacagttttctcctaccctgctgcgttccacgacgtcgttgaagtcacaaaacccgaattcgatag  13729900                                                                             --------->ZAT6                                                                       ----------->GT1                                                               --------->HSFB2a(2)           <-----------GT1                         ------>ZmHOX2a(1)  --------->DAG2       --------->At5g28300                     --------->ARR14(2)     <---------TOE2(3)      ----------->GT1                 <---------HSFC1(2)       --------->LBD16      <---------MYB46(3)              <---------HSFB2a(1)      ------>ZmHOX2a(1) ---------->DOF2                      --------->HSFB2a(1)     <---------LBD16<-----------GT1 ----------HVH21         <---------MYB52(1)  <---------MYB46(3)<---------HSFB2a(2) -----At4g35610       <---------TOE2(3)     <---------TOE1(2)----------->RAV1(2)                 ---- ---->At4g35610      <-----------GT1  --------->HSFC1(2) <---------------AGL15                  <----   ctgtcaagcggttaaaccgcttataacgtttgctaatggaaactccttggttcctcttactactcctggaaaaaggttaatactacttccacatacaaat  13730000  Previous    Next  AGI:  At2g32295.1    Description:  EXS family protein / ERD1/XPR1/SYG1 family protein. similar to EXS family protein / ERD1/XPR1/SYG1 family protein [Arabidopsis thaliana] (TAIR:AT5G35730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24165.1); contains InterPro domain EXS, C-terminal; (InterPro:IPR004342) Range:  from: 13726625    to: 13729256    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g32300.1    Description:  UCC1 (UCLACYANIN 1); copper ion binding. similar to plastocyanin-like domain-containing protein / mavicyanin, putative [Arabidopsis thaliana] (TAIR:AT2G26720.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24176.1); contains InterPro domain Blue (type 1) copper domain; (InterPro:IPR000923); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) Range:  from: 13729504    to: 13730667    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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