Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   --------->ANAC58                                             <-----------HVH21                                            ------->GAMYB                                            --------->AtMYB61                                           --------->MYB46(3)                                        <---------WRKY12                                      <-----------HVH21                                      --------->TOE2(3)                                     --------->ANAC58                                     --------->ANAC46                                     --------->ANAC58                                    <---------ANAC58                                    --------->SPL7                                       <---------ANAC46           <----------DOF2       --------->AtMYB61                                       <---------ANAC58   <----------DOF2             ------>NtERF2--------->YAB1                        --------->At4g35610  <---------ANAC58             ----------->RAV1(1)                           <---------ANAC46  <---------ANAC58            <---------ALFIN1   --------->ANAC46            <---------ANAC58 ---->ARR11(3)<---------YAB1  --------->ANAC46   --------->ANAC58            <---------ANAC58 --->YAB1 <---------DAG2     --------->MYB46(3)<---------ALFIN1 <----------DOF2   <---------At4g35610   tattgctttggaccttttgattcaacgattccccaccatacgtcaaccatcactccatctacttgactttgtttcagtttcttgagctgtttcttgagac  13723600                                                   <---------ANAC46                                                   <---------ANAC58                                                   <---------ANAC58                                                   <---------bZIP60(2)                                                 <---------TGA2(2)                                       --------->At4g35610               <---------WRKY45                         --------->MYB52(2)     ----------->TGA1         <---------WRKY12                         <---------ANAC58       ----------->HVH21        <---------WRKY38(1)    <----                         <---------ANAC58     --------->YAB1            --------->WRKY18(1)   <------                   <---------DOF5.7(2) <---------At4g35610            <------MYB46(1)      --------->ANAC46                 --------->DOF5.7(2)   <---------ZAT2       <------ZmHOX2a(1)             --------->SPL7                --------->TOE2(3)      --------->ZAT2 --------->ETT(2)<------MYB83 ---------->ID1   tctcttcgttttcaagaacgttatcgttcgtgatgactccaagctgaagcatgacgtagacaggaacatagttggtcaacattttgtcttcatacgtcgt  13723700              <------NtERF2              ----------->RAV1(2) <--------ATHB1              <---------ANAC46    -------->HAHB4             ------>NtERF2        --------->ATHB12            --------->ETT(2)     --------->ICU4          <-----------HVH21      <---------ATHB12            --------->MYB52(1)                   ---         <-----------RAV1(1)     <---------YAB1          ----------->GT1          <---------GLK1(2) --NtERF2=================RAV   <---------TOE2(3)        <---------ZAT6 --------->DAG2         <----- ---DEAR3(1)<---------ETT(2)   --------->YAB1 --------->ANAC46         ---------->DOF2    <----------   cgtattgaactctgtcgcctgtgttttcaagattaatgattcaaaaacacaaaaccagagagttaacagaaaaaaaagctcaaagattgttgttactact  13723800                                                             --------->YAB1                                                 ------>ZmHOX2a(2)                                                <------ZmHOX2a(2)                                               --------->ARR11(3)                                               <---------ARR11(3)                                               <---------ARR14(2)                             <---------ANAC46  --------->ARR14(2)              <---------HSFB2a(2)   <---------ANAC58       <---------WOX13(1)                      -- ----->P  <-------GAMYB      <---------ANAC58 --------->GLK1(1)                                    <- ----MYB52(2) --------->HSFB2a(2)   <---------ANAC58     --------->ATHB12                    <------- -GT1    <-----------RAV1(1) <---------ANAC58 <---------GLK1(1)       --------->ATHB12       <-------   aacctttggttctgttgcagaagaagcagtggcttgatgcgttcttagagatccctccttgattgataatctccattggactcgttttttagtttcttta  13723900                    ------>ZmHOX2a(1)                    <----------DOF2                  ------>ZmHOX2a(2)                 <------ZmHOX2a(2)                --------->ARR11(3)                --------->ARR14(2)                                                                 <-                <---------ARR14(2)      --------->WRKY12                                           --                <---------ARR14(3)      --------->WRKY38(1)                                     -----                <---------ARR11(3)     <---------MYB52(1)  <---------ICU4                       ----- ------------->AtSPL8                 <-------GAMYB       <---------YAB1                      ------- --------------AtSPL8         <---------GLK1(1)    <---------TOE2(3)                         -------- --------AGL15  --------->ARR14(3)   <---------ANAC46  <-------TEIL                  <---------ANAC58 ---DOF2--------->DAG2        --------->GLK1(1)<---------GLK1(2) ------>ZmHOX2a(1)   <---------ANAC58   tcttgtacaaaaattgaagatcctttgtggagatttcttccgttgatcagattagggttcatcattcctaatacgcttgtcatggtaccttgcacttgac  13724000                                <---------YAB1                               <---------ARR11(3)                               --------->ARR11(3)                              --------->YAB1                             <---------YAB1                           <---------ICU4                           --------->YAB1            --------->AHL20(2) --------->AHL20(2)                          --------->ICU4             <---------ICU4     <---------AHL20(2)        --------->YAB1    <---------YAB1             <---------AHL20(2) <---------AHL20(1)      *TSS              -------->ATHB1            --------->AHL20(2)    --------->AHL20(1)      <---- --------ARR14(2)       <--------HAHB4           <---------AHL20(2)    --------->AHL20(2)    <------NtERF2 ------->ARR14(2)       <---------ICU4           --------->AHL20(2)    <---------AHL20(2)   ------>NtERF2 ---->ANAC55(2)         --------->YAB1         --------->YAB1      --------->AHL20(1)      <---------ANAC46 ---->ANAC46           --------->ICU4    --------->ANAC58          --------->AHL20(2)      <---------ANAC58 -->MYB52(1)           <---------ATHB12  --------->ANAC58          <---------AHL20(2)      <---------ANAC58 --->HVH21        --------->HSFB2a(2)    --------->ANAC46         --------->AHL20(2)    <-----------RAV1(1)   ggaactacaaaaatcatttactggaatcattatgatcatacacacacaaaaataattttttcagtgaaattaattaaatttgctaattttctggcgcgtt  13724100                                         <---------AHL20(2)                           <---------ANAC58                        --------->ATHB51<---------AHL20(2)                            <---------ANAC46                        <---------ICU4  --------->AHL20(2)                            <---------ANAC58                       --------->ICU4   <---------AHL20(1)                      <---------YAB1                ------->MYC3  <---------ANAC58                             <---------ANAC55(2)                <-------MYC3  <---------ANAC58                           <-----------GT1 ---TEIL       <---------O2 <-----------GT1 <------------------------ANAC81--------->ANAC55(2)   cgtatgctatcaacaaaacgtggccataattttcttgcccaatttttttttttttttttttgtatttttgtttagtcacgtttttattccttgttttgta  13724200                                          <---------ARR11(3)                                          --------->ARR11(3)          --------->ANAC58     --------->At5g28300              --------->YAB1                  --------->ANAC58          -----    --------->LBD16                  --------->AHL20(2)           <---------ANAC58              -----   --------->ANAC55(1)           --------->MYB46(3)               <---------ANAC46              <----   --------->ANAC58            <-----------GT1                    <---------ANAC58<------ZmHOX2a(2)   --------->ANAC46       --------->YAB1 --------->CCA1(1)===============================HOX2a_HOX2a   --------->ANAC58      <---------YAB1  --------->RVE1(1)--------->YAB1 ----------->RAV1(1)   <-----  <---------LBD16      --------->YAB1<---------ATHB12     <------ZmHOX2a(1)<---------HSFB2a(1) <-----   gtttcacggaaaatagaagaatgaattatcatataaccaataaatatctatgtgatactaggatagtggggtatgcaacattcgatcagtgtccatgaag  13724300                                                                                           ------>ZmHOX2a(2)                                                                                          <------ZmHOX2a(2)                                                                                         --------->ARR14(3)                                                                                         <---------ARR14(3)                                                                                         --------->ARR11(3)                                                                                         <---------ARR11(3)                                                                                         <---------GLK1(2)                                                                                         <---------ARR14(2)         <---------YAB1                                      <---------ICU4              --------->ARR14(2) ---->HSFB2a(1)                                           --------->YAB1        --------->ETT(2) ---->HSFC1(2)                ------>ZmHOX2a(1)          <---------AHL20(2)  <---------MYB46(3) -----HSFC1(2)              ----------->RAV1(2) <---------ANAC58            <---------AtMYB61     --- ----TOE2(3)           ------->TEIL             <---------ANAC46            --------->ALFIN1 ------>ZmHOX2a(1) ----TOE1(3)<---------TOE2(3) --------->LBD16   <---------ANAC58     --------->AtLEC2  ----------->ARR10   gttctccagttactaatgaaaaatgtatgctcctgagacaactcatcgtgccttgataaataatcaattccatggacagtggtcgatataagatcctctg  13724400                                  --------->DREB2C(2)                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                  --------->DEAR4(1)                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                  --------->At1g77200                                  <---------ETT(1)                               xxxxxxxxxxxxxxxx>smallRNA(i)                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                              xxxxxxxxxxxxxxxx>smallRNA(i)                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                          <---------ANAC55(2)                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                          --------->ANAC55(2)                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         --------->ATHB12                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    --------->ARR11(3)                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    <---------GLK1(1)                      <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       --------->GLK1(1)                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    --------->RVE1(1)                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     --------->CCA1(1)                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    <---------RVE1(1)               ------                    <---------YAB1--------->DEAR3(1)           <---------CCA1(1)               <-----                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)        --------->ARR11(3)         xxxxxxxxxxxx           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  <----------DOF2     <---------YAB1   xxxxxxxxxxxxxx          xxxxxxxxxxxxxxxx>smallRNA(i)       <---------At4g35610<---------ARR11(3)     xxxxxxxxxxxxxx      ---------->DOF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)     <---------ARR11(3)     xxxxxxxxxxxxxxxx ------>GLK1(1)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)        <---------TOE2(3)    ---------->DOF2   atttctaagaaagaccagacctctgattacatatcaccgacaacttctgcttctttccatttaagatatcttatgatttctaagaaagaccagacctctg  13724500  Previous    Next  AGI:  At2g32290.1    Description:  BAM6/BMY5 (BETA-AMYLASE 6); beta-amylase. similar to ATBETA-AMY (BETA-AMYLASE), beta-amylase [Arabidopsis thaliana] (TAIR:AT4G15210.1); similar to Chain A, Crystal Structure Of Soybean Beta-Amylase Mutant Substituted At Surface Region (GB:1UKO); similar to beta-amylase [Glycine max] (GB:AAY40266.1); similar to beta-amylase [Castanea crenata] (GB:AAK30294.1); contains InterPro domain Glycoside hydrolase, family 14B, plant; (InterPro:IPR001371); contains InterPro domain Glycoside hydrolase, family 14; (InterPro:IPR001554); contains InterPro domain Glycoside hydrolase, catalytic core; (InterPro:IPR013781) Range:  from: 13721624    to: 13724006    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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