Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            <---------YAB1                                                     --------->YAB1        --------->AHL20(1)                                                    <---------YAB1         --------->AHL20(2)                        <---------AHL20(2)        --------->YAB1           <---------AHL20(2)                        --------->AHL20(2)        <-----------GT1    <---------AHL20(2)                    <---------AHL20(2)        --------->ATHB51       --------->AHL20(2)                    --------->ATHB51          --------->AHL20(2)  <---------ICU4                    --------->AHL20(2)        <---------AHL20(2)  <--------HAHB4    --------->AHL20(2) --------->AHL20(2)     <--------HAHB4     --------->ICU4   --------->YAB1   <--------HAHB4            -------->ATHB1     <---------YAB1  --------->AHL20(2)-------->ATHB1           <---------ATHB51  --------->YAB1     <---------ETT(2)  - ------>GT1        <---------ATHB51          --------->ICU4   <-------TEIL--------->AHL20(2) -------- ->DOF2            --------->ICU4   --------->ZAT18<-----------GT1--------->ATHB51--------->ETT(2) <-   gtaaataaaaatatcaatacaattatttaatttttaagggcaatacaattatttatcattttgattcataattaaaaaaaattgtcgacaaacaaaaaag  13719700         <---------AHL20(2)                                                                        --   <---------ICU4              <---------CCA1(1)                                                ----- -------->YAB1                 <---------RVE1(1)                                               <----- -->DOF2--------->AHL20(2)    --------->ARR11(3)                                             -------- ------TEIL   <-----------GT1 <---------ARR11(3)       <----------DOF2               --------->AHL20(2)   cttcataattttaaatttagcatatattaagagatatttcataagagacactaatgtctttctaattttcatgttaacttggatgttttaaatatcaatc  13719800        --------->ATHB51       --------->ICU4       <---------YAB1                           ------>ZmHOX2a(2)             --------->AHL20(1)  ----------->GT1                          <---------WOX13(1)              --------->AHL20(2) --------->DAG2                          --------->ATHB51                  <---------AHL20(2) <---------TOE2(3)                      <---------YAB1          >>>>>>>>>>>>>>>>>LFY -------->DOF2                     ----------->GT1         --------->WOX13(1) --------->ARR11(3) ---->YAB1XXXXXXXXXXXXXXXXXXXX>MIR171A  --------->ICU4   <------ZmHOX2a(2) --------->YAB1 ----ATHB12                    --------->DAG2  <---------At4g35610        --------->ICU4       <----- ->WOX13(1)                   ---------->DOF2 <---------AGP1 <---------ATHB12 <---------AHL20(1) ----   aaaaaggttataattgagcctcaccaaaaaaaaaaaggggttataattgatctgattcgatcaattatccagtgtaattatatattgcaatctagttaat  13719900                                                                                       <----------DOF2                                                        ---------->DOF2             --------->ARR11(3)                                                   <---------ARR11(3)               <---------ARR11(3)                                                   --------->GLK1(2)                <---------AHL20(1)     --------->TOE1(3)                     <---------At4g35610                     --------->CCA1(1)     --------->TOE2(3)                     --------->At4g35610               <------ZmHOX2a(1)   <---------TOE2(3)                       ----------->GT1                  ----------->GT1   <---------TOE1(3)                      --------->ANAC58    <-------TEIL<-----------RAV1(2)  <-----------GT1                    --------->DAG2--------->ARR11(3)   ----------->RAV1(1) ----TOE2(3)                       ---------->DOF2--------->RVE1(1)--------->GLK1(1)--------->AHL20(1) ----->YAB1            ------>ZmHOX2a(1)  --------->ANAC58   --------->CCA1(2)     --------->RVE1(1)   gatataacgttataggtctcatttcctacattcaactaaaaggtaagctaaaaaatctaaaagatacaaatatccaacaggagaaatatctttttctctc  13720000                                                                                            ------>MYB46(1)                                                                                            -------->P                                                                                            ------>MYB83                                                                                           --------->MYB55(1)                                                                                          --------->AtMYB61                                                                                          --------->DEAR3(1)                                                                                          <---------MYB111(2)                                                                                          <---------MYB46(2)                                                                                          --------->MYB46(3)                                                                                          <---------MYB111(1)                                                                                          <---------MYB55(2)                                                                                    <-----------GT1                                                                                ----------->TBP                                                                              ----------->TBP                                                                             <---------AHL20(2)                                                                       <---------DAG2     <---------ALFIN1                                                           <---------DAG2   --------->AHL20(2)                                               <---------ALFIN1        <----------DOF2  --------->ANAC46                    <---------CCA1(2)          --------->ANAC46<---------ANAC58 <---------AHL20(2)           ---------->ID1 <----------DOF2    <---------ALFIN1  <---------ANAC58 --------->AHL20(2)         <-----------RAV1(1)        <----------DOF2        <----------DOF2 <---------YAB1--------->MYB46(3)   attgtctatatttgttgttcttctatctctttctctctctttttcttccacaccctcacaactttacttacgactttattatatatataccaccaaccca  13720100                                                                                    ---------->DOF2             <---------ICU4                                                 ------>NtERF2             *TSS                                                          ------>NtERF2            <---------YAB1                                                 --------->LBD16        ---            <------ZmHOX2a(2)                                             --------->LBD16 --------->HSFB2a(1)           <---------ARR11(3)                                             --------->ANAC46<---------HSFC1(2)           --------->ARR11(3)                                             --------->DEAR3(1)    -----       ---------->DOF2                       <---------YAB1              <---------LBD16  <---------HSFB2a(1)   --------->YAB1                --------->ZAT6                          --------->LBD16  --------->HSFC1(2)   ttttgtcataaaagatcattactcgttaagactttccactacccattctcattctctcttcaactaatattcttccccggccctcataaagaagcttctc  13720200                                        --------->ARR14(2)                                        <---------ARR14(2)                                   ---------->DOF2                              --------------->AGL15                              <---------------AGL15                           <---------ARR14(2)                           --------->ARR14(2)         <-----------GT1   ------->TEIL <---------ARR11(3)                                      <----   <----------DOF2        <---------CCA1(2)   ----------->RAV1(1)           --------->CCA1(2)-------- --->ZmHOX2a(1)  ----------------->AG   --------->ARR11(3)   ------>ZmHOX2a(1)          ---------->DOF2 ------>RAV1(2)  =============================MADS_MADS     --------->TOE1(2)       <----------ID1   ctgttctttattcacattttccaaaattgtatcttcttaaagtatctccaacaaaactaaatcctactaagttaagagatttgaaaatgacaaagatagg  13720300                                                  --------->LBD16                                                  <---------LBD16                                        --------->At4g35610                                        <---------At4g35610  <---------At4g35610                                     --------->At4g35610     --------->At4g35610        <---------ANAC58             <---------ZAT2--------->ANAC46              <---------ANAC55(2)        <---------ANAC58             <---------At4g35610     --------->ZAT2      ----------->GT1  <---------YAB1                    ------->TEIL --------->TOE1(2)     <------NtERF2    <---------AHL20(2) --ZmHOX2a(1)                    <---------REM1(1)------>ZmHOX2a(1) --------->ATERF1(1) --------->AHL20(2) ->CCA1(2)              <---------ZAT18 --------->ZAT2       <---------ZAT2     --------->MYB59    <-   aggtattcttgtttgtctagtcattgtgggcttagatgtagctgctgcaatcctcggaatccaagctgaagtcgcccaaaatcaggtaaaataaatgttc  13720400                                                       <-------GAMYB                                                      <---------MYB46(3)                                                     <---------YAB1                                                   --------->YAB1                                                   -------->HAHB4                                      <---------------AGL15                                      --------------->AGL15                                     <-----------------AGL1                                     ----------------->AGL2                                     <-----------------AG                                     <-----------------AGL3             <---------TOE2(3)       ----------------->AGL3           <---------AHL20(2)        <-----------------AGL2       <---------AHL20(2)          <---------YAB1  <---------ICU4       --------->AHL20(2)       <---------YAB1    <---------ATHB12      --------->AHL20(2)     <---------AHL20(2)   --------->ICU4 ---------DOF2<-----------RAV1(1)--------->YAB1   <---------YAB1   <-------TEIL   tctttcaaattaataaatgttgtttccctaatttatgatgctaaaattggtaatgatggttgcataacatacatactgtctcaaacttagaaattttctc  13720500                                    <---------GLK1(2)                                    --------->ARR11(3)                                    <---------ARR11(3)                              <---------AHL20(2)                                        ------->MYC3                             --------->AHL20(2)                                 <---------REM1(1)                        --------->TOE2(3)                                     <------MYB83                     --------->ARR14(2)       <-----------GT1        ------>ZmHOX2a(1)  <-------MYC3                     <---------ARR14(2)<---------AHL20(2)       <---------GLK1(1)---------->DOF2  ---                    <------ZmHOX2a(1)<---------RVE1(1)   --------->MYB46(3)   <------MYB46(1)  <-----   aaaaaaaaaaaaaaaaacattaggaacctgaattaatagatttttttttaacaaatgaaaccatcgatttcctctattgtaggtgaagcacatgaggctt  13720600  Previous    Next  AGI:  At2g32280.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G21310.1); similar to unknown [Populus trichocarpa] (GB:ABK92874.1); contains InterPro domain Protein of unknown function DUF1218 (InterPro:IPR009606) Range:  from: 13720113    to: 13721288    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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