Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <------MYB46(1)                                                      --------->ALFIN1                                             <---------YAB1                        ---------->DOF2    --------->YAB1                      --------->At4g35610  <---------ICU4                                <-----------GT1                      <---------At4g35610  <--------ATHB1                           <---------MYB46(3)  ----------->GT1<---------ZAT6           <---------ATHB12                          <------MYB46(1) --ANAC58        ----------->HVH21        <---------ATHB51                          <------MYB83    - --ANAC58    <---------ZAT14              --------->ICU4<------MYB83              <--------P        <   tttgaagttaaaaagtttagtgacagcaaagtgcaaactaaacaataattcttgaagtgggttttacataaaccatgagtacttgttggtttatctgttt  13715500               --------->AHL20(1)               --------->ARR14(3)                                                   <---------ANAC58               <-----------ARR10                                                    <---------ANAC58               <---------AHL20(1)                                                <---------MYB52(1)               <---------ARR14(3)                                        ---------->DOF2               --------->ARR11(3)                                    --------->ANAC58               <---------ARR14(2)                                    --------->ANAC58<---------DAG2               --------->ARR14(2)<---------ANAC58                    <---------ANAC55(2)      --------->ANAC46           <---------ANAC58                   --------->SPL7  <---------ANAC46  <-------TEIL <---------ARR11(3)<---------ANAC46  --------->TOE2(3)--------->SPL1(2)<----------DOF2 --------->ARR14(1)        ------>ZmHOX2a(1)    <-----------GT1   <---------SPL7<-------GAMYB -------->ARR11(1)     --------->ARR14(2)   --------->AHL20(2)  <---------------AtSPL3            --- ---------GLK1(2)      <---------ARR14(2) --------->AHL20(2)    <---------------AtSPL8            <--   tagattcgacacaacaatatcttggtatcctctatgcgtgttcaaaaaatataccctaaaaacaaatcggtacggaaaagaccgttgctttttgtgtctt  13715600               <----------DOF2     --------->At4g35610                                  --------->AHL20(2)          --------->HSFB2a(1)      <---------At4g35610                                  <---------AHL20(2)          <---------HSFB2a(1) <---------YAB1                               <<<<<<<<<AtERF-4 ------------>AGL15       --------->TOE2(3)                               <---------RAP2.6(2) -------------AGL15       --------->YAB1                                  <---------RAP2.3(2)   ctatatttcgaaaccttcttttttgtaatcttattacagatgagtcgatgacaaaacaaaaccatcaaaaacagtagcggctcatactaattttttagtg  13715700                                                                              --------->ANAC58                                                                              --------->ANAC46                                                                              --------->ANAC55(2)                 <---------TOE2(3)                                <---------AHL20(2)                <-----------GT1                                --------->ARR11(3)            <----------DOF2                                    --------->AHL20(1)      <---------------AtSPL8                                   <---------AHL20(1)      --------->DAG2                                         <---------AHL20(2)      --------------->AtSPL8     <---------AHL20(2)          <---------AHL20(1)      <---------------AtSPL3     --------->AHL20(2)          --------->AHL20(1)     ---------->DOF2  --------->AHL20(2)              ----------->GT1      <---------SPL7 <---------AHL20(2)--------->TOE1(3)          ------>ZmHOX2a(1)<---------ARR11(3)        <---------ALFIN1 --------->AHL20(2)--------->TOE2(3)    --------->MYB59   --------->AHL20(2)  --------->ANAC58 ------   gatttaaaaaagtacttttaacattaaaacaatatttaaattttggtcctcaaatttagttaaaatatttttttggccatacgcatttgctccacttaca  13715800                         --------->ARR11(3)                   --------->YAB1             ----------->RAV1(2)         ------->GAMYB   <---------ARR11(3)        --------->DEAR3(2)        --------->MYB46(3)          <---------AHL20(2)                                           ----        <------------AtMYB77        <---------YAB1                                              -----      <---------ARR14(2) <---------AHL20(1)              --------->TOE2(3)                      -----      --------->ARR14(2) --------->AHL20(1) <XXXXXXXXXXXXXXXXXXXXMIR417                         ===== --->ZAT6--------->DEAR3(1)      <---------ARR11(3)<-----------GT1 <-----------GT1  --------->DAG2<--   ctactgaagaaccgcccctgatcaaaatatatcaacatattattcgaacaaattcactaccttcatgtttaaccatttccatcaataaggggaaaacata  13715900          --------->O2          =========================bZIP_DOF          --------->ANAC55(2)          <---------TGA1a          --------->TGA1a                   --------->MYB52(2)          <---------O2                    <---------MYB52(1)          <---------ANAC58               --------------->AGL15          <---------bZIP60(2)            *TSS          <---------ANAC55(1)            <---------------AGL15          <---------ANAC46              <-----------------AGL1          <---------ANAC58              ----------------->AGL1          <---------ANAC55(2)   --------->AHL20(1)                         <---------ANAC58         ----------->STF1       --------->ARR11(3)                         <---------ANAC46       ----------->TGA1         <---------AHL20(1)                   <---------YAB1       ----------->HVH21        <---------ARR11(3)                <----------DOF2             ------- ----->DAG2                     <---------AHL20(2)             <---------ARR11(3)        --------->ANAC46 ---->MYB52(1)          <----------DOF2---------->ID1          --------->ARR11(3)     <---------ARR14(2) ----->DOF2             <---------DAG2<-----------GT1      ---------->DOF2 <---------ANAC58 ------->TEIL ===================bZIP_DOF    --------->AHL20(2)   ----------->GT1<-----------TBP   --------->ARR14(2) -------TOE2(3)   <-----------GT1<---------AHL20(2)---------->DOF2<---------DAG2 ---------->DOF2   <-   aaggaaatagtgacgtgttttgaccacttttgaatatatttttcgttatttggcaaagtgaaaaagaactttttatagcgtggcaaagtatacgaaccga  13716000                                             --------->AHL20(2)                                             <---------AHL20(2)                                           --------->AHL20(2)       ----------->GT1                                          <---------AHL20(1)       <---------YAB1                                          <---------ARR11(3)     --------->YAB1                    <-        --------->TOE2(3)                 --------->AHL20(1)    <---------YAB1                  <----    <---------ANAC58                 ------------>CBF        --------->AHL20(2)                 <----    <---------ANAC58             --------->ARR14(2)          <---------AHL20(2)                <----- ---->GT1------>ZmHOX2a(1)      ----------->TBP        --------->YAB1                        -------- -----------CBF    ------------>CBF <-----------GT1    ----------->GT1                       <-------   aaattgtcgtccttaatgaaaaacaatgttctccatatatacaatatatatatactatagtaatttatcatggttatatatgttcgaattcaacatatac  13716100                                                                  --------->ANAC58                                                                  --------->ANAC58                                                               --------->TOE2(2)                                                               --------->TOE1(2)                                                               <---------SPL7                                                             <-------TEIL                     -------                                                             --------------->AtSPL8           <------                                                             ------->TEIL                   ---------                                <---------AHL20(2)           --------------->AtSPL3  --------->ALFIN1 ------TEIL                    xxxxxxxxxxxxxxxx>smallRNA(i)  <---------------AtSPL8<------MYB46(1) -----ANAC58                  <---------RVE1(1)          <---------------AtSPL3   --------->MYB111(2) -----ANAC58                 <---------GLK1(2)         <-------TEIL               <---------AtMYB61 --TEIL   <-----------GT1    <---------ARR11(3)   <---------WOX13(1)       --------->ARR11(3)<-------TEIL ->ARR14(2)                  --------->ARR11(3)<---------AHL20(2)--------->SPL7<---------REM1(1) --ARR14(2)                ----------->ARR10   <---------YAB1<---------------AtSPL3<------MYB83   gtgcatcatatgtcacaatattagaagattagattttttttttttttttttaattgatacatgtacgtacgaaaatagataatgtaggtgggagatacat  13716200                           --------->MYB52(2)                         <--------P                         <---------MYB52(1)               --------->AHL20(2)                       <------MYB46(1)                <---------AHL20(2)            --------->AHL20(2)                        --------->AHL20(2)            <---------AHL20(1)                    <---------AHL20(2)     <---------ARR11(3)<------MYB83              --------->AHL20(1)   <---------AHL20(2)    <---------CCA1(2) --------->MYB59         --------->AHL20(2)     <---------AHL20(2)  <----------DOF2<---------AHL20(2)         <----------DOF2 <---------YAB1 -->ANAC55(2)    --------->AHL20(2)       <---------YAB1  <---------AHL20(2) ---ANAC55(2)   --------->AHL20(2)      <---------CCA1(2)<---------AHL20(2) <---------TOE2(3) >CCA1(2)   <---------AHL20(2)   <-----------GT1 <---------AHL20(1)  --------->AHL20(2)           ---   atcgctatatctattttatttaatttggttagttttaatctcttatctttatatatttatttatttttgaataaaattttggttaacatatactaagttc  13716300         <---------ICU4    ----------->RAV1(1)    <---------ALFIN1                    ----------->GT1   --------->ANAC46                --------->YAB1  ----------->RAV1(1)             <---------AHL20(2) <---------ALFIN1                --------->AHL20(2)                        <---------AHL20(2) --------->ANAC46         --------->AtLEC2--------->AHL20(2)              --------->AHL20(2) ------>ANAC46       <---------CCA1(2)---------->DOF2        --------->AHL20(2)    <---------YAB1<---   cctccaccacataagtacaacctgtatcatgcatatataataaagaaaatactacattccaaattaaaacttccaatttaaaattttgatatcaacaaat  13716400  Previous    Next  AGI:  At2g32273.1    Description:  MIR417 (MICRORNA417); miRNA Range:  from: 13715825    to: 13715941    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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