Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  ------->GAMYB                                ----------->HVH21                                --------->ANAC46                               <---------MYB55(2)                              ----------->RAV1(2)                              --------->ANAC46                       --------->ANAC46                 <---------KAN4(2)                 ---------->TaMYB80             --------->LBD16 --------->MYB52(1)                                    <---------ANAC58            <---------ANAC58 ------>MYB46(1)               --------->ANAC58        <---------ANAC58            <---------ANAC46 -------->P        <------ZmHOX2a(2)                   <---------ANAC46            <---------ANAC58 ------>MYB83     <---------ARR14(2)                 ====================HOX2a_HOX2a         <---------MYB52(1) <---------ALFIN1  --------->ARR14(2)                 ------>ZmHOX2a(2)         ----------->HVH21 <---------MYB55(2) <---------ARR11(3)                <------ZmHOX2a(2)        <-----------HVH21  --------->AtMYB61  --------->ARR11(3)               <---------ARR11(3) ----------->HVH21 <-----------GT1  ----------------->AGL3 --------->ANAC58    --------->ARR11(3)---- ----ANAC46 <---------ANAC55(2)--------->MYB46(3)    ------->GAMYB         ---------->DOF2    <------ZmHOX2a(1) ----ANAC58 <---------ANAC55(1)--------->DEAR3(2) --------->MYB52(1)  <---------ANAC46  ---------->DOF2 ----ANAC58<---------LBD16 --------->MYB46(3) --------->AGP1        ------->TEIL=====================HOX2a_HOX2a   tgagcgacgctgttacgggtataacccgacccacccgacccgaatgtagatccaacgggcgaagcaaatgtatcggataaagatcgcttgtaaagaggag  13690900                                                            <-------TEIL                                                           --------->GLK1(2)                                                           --------->ARR14(1)                                                --------->ARR11(3)                                                <---------ARR11(3)                                                --------->ARR14(2)                                       <---------HSFB2a(1) --------->CCA1(2)       <---------ANAC58              <---------ARR14(2)   --------->ARR14(2)       <---------ANAC46              <---------GLK1(2)    <---------ARR14(2)       <---------ANAC58          --------->At4g35610      --------->ARR11(1)   --------->GLK1(1)             <---------At4g35610      <---------GLK1(2)   <---------GLK1(1)          <------ZmHOX2a(1) --------->KAN4(2)      <<<<<<<<<TBF1  <---------ARR14(2)     ------->GAMYB--------->GLK1(2) ----------->ARR10    ------>ZmHOX2a(1)   <---  --------->ARR14(2)     ----------->RAV1(1)    <---------ARR14(2) ----------------------->TaNAC69(2)  <---------GLK1(2)      --------->AtMYB61     <---------GLK1(1)<---------ARR14(2)       <---------KAN4(2) ----->MYB52(1)         --------->MYB46(3)     <---------KAN4(1)--------->ARR14(2)  <---------LBD16   aacggatttgcgtcggattgaattcaaccacaggaagcggaatctttgaatatcccatgagattcgggtcttcttcttcctcaggtctcggaataaacag  13691000                                                                                               ------                                                                                              <------                                                                                             <-------                                                                                             <-------                                                                                            <--------                                                                                            <--------                                                                                           ==========                                                                                           ----------                                                                                           ------>ZmHOX2a(2)                                                                    <---------AtMYB61      ==========                                                             <-------GAMYB                 <-------TEIL                                                            --------->MYB111(2)           --------->CCA1(2)                                                            --------->MYB55(2)            ===========                                                            --------->MYB52(2)            ===========                                                            --------->MYB111(1) --------->ARR14(2)                                                            <-----------RAV1(1) <---------ARR14(2)                                                    ----------->HVH21          <------ZmHOX2a(1)                                                  <---------ANAC55(2) <-------GAMYB       <------ZmHOX2a(2)                                    <---------DEAR3(1)      <---------MYB46(3) ===================HOX2a_HOX2a                                  ------>NtERF2   --------->ANAC55(2)--------->MYB55(2)  --------->ARR11(3)               <-----------HVH21  --------->LBD16 --------->ANAC46  --------->ALFIN1     <---------ARR11(3)              --------->ANAC58  <---------LBD16   <---------O2   <---------DEAR3(1)      <---------ARR14(2)              --------->bZIP60(2)<---------LBD16  --------->O2   <---------ANAC46        --------->ARR14(2)    <---------ANAC58          --------->ARR14(2) <---------LBD16 <---------ANAC58      ----------->ARR10    <---------ANAC58    <---------ANAC58      <-----------HVH21  <---------ANAC58    ---------->DOF2    <---------ANAC46    <---------ANAC58  ------->TEIL     <--------P<---------MYB46(3)--------->HSFB2a(1) ------GLK1(2)--------->ANAC58<---------ARR14(2)<-----------GT1 <---------LBD16==================HOX2a_HOX2a   cttcttgcgtctcggctcgtcaccttgcttcgattccggcgatggacgtttcacgggactggttgttgcggtggttgaagaggaaccgaaagatccgtac  13691100                                <------NtERF2                                --------->ATERF1(1)                               <---------RAP2.3(1)                               <---------ERF1                               <---------DEAR4(2)                               ------>NtERF2                              <---------RAP2.3(3)                              <---------RRTF1(3)                              <---------DEAR3(1)                              <---------RAP2.3(2)                              <---------ANAC46                             <---------ABI4(1)--------->ARR14(2)                            <---------ATERF1(1)                    --------->ARR14(2)      --------->HSFB2a(1)                    <---------GLK1(1)  --------->At4g35610                  <------ZmHOX2a(1)<-----------HVH21 <---------At4g35610        <---------ANAC58   --------->ANAC58 --------->HSFC1(2) --->SPL7--------->LBD16   <---------DEAR3(1) <---------ARR14(2) ---SPL1(1)       =========================HOX2a_HOX2a --SPL7<---------LBD16     --------->ANAC58 <---------HSFC1(2)                                <------ --SPL1(2)   ==============================HOX2a_HOX2a                        <------ZmHOX2a(2)     - -ANAC58<---------ANAC46   --------->ANAC46 <---------HSFB2a(1)               ======================= -ANAC58<---------ANAC58  --------->SPL7  <------ZmHOX2a(1)                  --------->ARR11(3)   --- ===================HOX2a_HOX2a<---------ATERF1(1)  --------->GLK1(2)        <---------ARR11(3)<----- ----->AtSPL3<------ZmHOX2a(1)--------->DEAR3(1)<---------HSFB2a(2)  <---------------------WRI1------ ========================HOX2a_HOX2a<------ZmHOX2a(2)<---------ZAT2  --------->ALFIN1        <------- ===================HOX2a_HOX2a<---------ORA47(2) --------->LBD16   =================HOX2a_HOX2a  <-- ========================HOX2a_HOX2a=============HOX2a_HOX2a        <------ZmHOX2a(1)  <---------At4g35610   gatttgaattgcggaggagaggaattcgcacggcggcgatcagaggagtttccgaagctgttgagacggaggagggagagatcaatgtcatcttcttcgg  13691200     <------ZmHOX2a(1)   <---------TOE2(2)                                            <---------ANAC58   <---------TOE1(2)                                            <---------ANAC58 --------->TOE1(2)                                       --------->ICU4 ---LBD16                                           --------->ANAC46 ----->ZmHOX2a(2)                                  <---------LBD16             ------>ZmHOX2a(2) ===========HOX2a_HOX2a                          <---------ARR14(2)          <---------ARR11(3) ------>ARR14(2)                                 --------->ARR14(2)  <------NtERF2 <---------ZAT14 ----HSFB2a(2)                                  --------->GLK1(1)  --------->RAP2.3(2)      --------- --->HSFB2a(2)                                  <---------GLK1(1)  --------->DEAR3(1)  <---------ZAT6 --LBD16                            <---------TOE2(3)--------->LBD16------>NtERF2  --------->ZAT14 -------ARR14(2)                    <---------TOE1(3)------>NtERF2 --------->RAP2.3(3) ----------->GT1   gatcgtaggagtaatcaacttcttgggaattagcgattagggtttctagggtttccgccatgtttagcgtcgccatcttgatctcagtactgttaaaagt  13691300                                                        <-----------TBP                                                    ----------->GT1                                                    <---------ANAC46               <---------LBD16                                                 --------->ALFIN1            <------------CBF                                               <---------ANAC46        --------->LBD16             --                                               <---------ANAC58       <---------ANAC58           <---                                               <---------ANAC58       <---------ANAC58       <-------                                             --------->ZAT14         <---------LBD16       <---------      ---------->DOF2                        <---------ZAT14       <---------ARR14(2)   <----------DOF2 ->DOF2        --------->CCA1(2)        <------ZmHOX2a(2)          --------->ARR14(2)--------->LBD16-   tcaaatgcgaaagagagaaatgagaagttgatgaagaagacgatcactggagtggggtttatataggcgaatgcgggtcgattgaaccgggtttattgtt  13691400                                                           --------->ARR11(3)                                                           --------->ARR14(2)                                                           <---------ARR11(3)      --------->ANAC58                                                           <---------ARR14(2)      --------->ANAC58                                                      ------------>CBF             --------->ANAC46  ------>MYB83                                    <---------AHL20(2)            ------>MYB46(1)  -------->P                                 --------->AHL20(2)                 -------->P  ------>MYB46(1)            <---------AHL20(2)  <---------AHL20(2)             ------>MYB83 <------MYB46(1) --------->MYB52(1)  --------->YAB1          <---------AHL20(2)            <---------WRKY18(1)    --- ------->MYB46(3)    <---------ICU4         --------->AHL20(2)   ------------>CBF---------->DOF2 ---- --------GT1        --------->ICU4    <----------DOF2<-----------GT1     <---------WOX13(1)  -------- --ZAT6             <---------YAB1<-----------GT1--------->AHL20(2)     <---------ANAC58     <------MYB83 ---CBF   --------->MYB52(2)--------->AHL20(2)   <---------AHL20(1)     <---------ANAC58    <-------- ------>GAMYB ----------->GT1--------->AHL20(2)  --------->AHL20(1) <------------CBF        <--------   aaccaactggtttagttggataattatcaaattaattcacctttgatttaatttaatacaatatctggacaattgcttgacctacaagcaagggctggta  13691500                  --------->At5g28300             <---------ARR14(2)        --------->ANAC46             --------->ARR14(2)        --------->ANAC58            <---------ALFIN1           --------->ANAC58           ----------->HVH21       ------->GAMYB                             <---------HSFC1(2)          <---------HSFB2a(2)      --------->AtMYB61                      ---------->DOF2    --------->ARR11(3)            <---------MYB55(2)                   --------->ANAC58    <---------ARR11(3)            --------->MYB46(3)                   --------->AtLEC2   <---------GLK1(2)             -------->P --------->ICU4             --------->ANAC58 -------->RAV1(1)----------->GT1 ------>MYB46(1)                       --------->ANAC46 ----->REM1(1)   --------->LBD16 ------>MYB83                     --------->ARR14(2) --->GT1 ----------------->AGL1 ------>MYB46(1)                   <---------ARR14(2) -------AtSPL8 <---------LBD16  ------>MYB83<-----------ARR10  --------->YAB1--------->HSFC1(2)------ -MYB46(3)--------->HSFB2a(2)--------->ANAC46     --------->At4g35610 <---------LBD16     <---------At4g35610   caacaaaatctcccagacccggtaaaacaaaacccaaccacaagcaaatattagcagagagagaagcatattcacgcaaagcttcttagttctgctatca  13691600                                        ------>ZmHOX2a(2)                                       <------ZmHOX2a(2)                                      --------->ARR14(2)                                      <---------ARR11(3)                                      --------->ARR11(3)                                      --------->AGP1--------->CCA1(2)                                      --------->ARR14(3)                                      <---------ARR14(3)                                      <---------ARR14(2)                                     --------->GLK1(1)                                     <---------GLK1(1)            --------->ANAC58                                    ----------->ARR10             --------->ANAC58                                 ==============HOX2a_HOX2a        --------->ANAC46                         <---------ATHB12          --------->ARR14(2)                  <----------ID1 <------ZmHOX2a(1) <---------ARR14(2)  <---------ALFIN1 --->YAB1  --------->LBD16       =============HOX2a_HOX2a------->TEIL----------->RAV1(1)    <--------   aaattcaaaaacccccaaaaaaaacaaatgaagaaggagagatcttcatttcagatatgaacatcatcaagccacactgagaagacgagactaatacttt  13691700                                                 <------ZmHOX2a(2)                                                --------->ARR11(3)                                       <---------ZAT14                                       --------->ZAT14                                     --------->ANAC46                                     --------->ANAC58                                     --------->ANAC58                                   --------->DEAR3(1)                                   <---------ALFIN1        --------->YAB1                                 ------>NtERF2  <---------ARR14(3)                                --------->DEAR3(1)       <-----------HVH21                            <------ZmHOX2a(2)   <---------ARR14(2)                           <---------ARR11(3)   <---------ARR11(3)                           --------->ARR11(3)   --------->ARR14(3)                 --------->YAB1 --------->ANAC46--------->ARR14(2)                <---------YAB1 --------->At4g35610------>ZmHOX2a(2)                               <--     --------->YAB1       --------->GLK1(1)     <-----------ARR10                              ------ -ICU4  --------->YAB1    <---------GLK1(1)----------->HVH21                               <------ZmHOX2a(1)   ctcccaagaattataccgatgataacagagatcagcgccactccagtgacgatcttcactgtcatgagatgtgaagttgatgctgtttgagtaggagtag  13691800  Previous    Next  AGI:  At2g32235.1    Description:  unknown protein Range:  from: 13689900    to: 13691276    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g32240.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G05320.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G05320.3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G05320.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO63724.1); contains domain PD023692 (PD023692); contains domain PTHR23160 (PTHR23160) Range:  from: 13691376    to: 13695401    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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