Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->ZAT14                                         <------ZmHOX2a(2)                               <---------ANAC46<---------ANAC58                         --------->CCA1(2)                     <---------LBD16       --------->YAB1                              --------->ARR14(2)                     --------->TOE1(2)    <---------YAB1                               --------->ARR11(3)                     --------->TOE2(2)  <---------ICU4                                 --------->AGP1                    ----------->RAV1(2)<---------YAB1                                  <---------ARR11(3)                   --------->GLK1(2)   --------->ICU4                                 --------->GLK1(1)                  <---------GLK1(2)  <---------ICU4                        <-----------HVH21      ---                  --------->ARR14(2) --------->YAB1                    <---------ATHB12<---------ARR14(2)                  <---------ARR14(2)--------->ICU4           <----------DOF2      --------->TOE1(2) ------>ID1 <---------ZAT6  <---------AtMYB61  <---------ANAC58  <-----------GT1  --------->TOE2(2) - >MYB52(2)  ----------->HVH21  <---------REM1(1)         <---------RAP2.6(2)     ----------->RAV1(2)<   tcttcttacatgtagtgacagaacctgggaatggtgtagtcattatcagacttgccatggctgcttttatccaatcttgtcaaacctgagatccacaatg  13679900  --------->AHL20(2)                       ----------->GT1    ---------->DOF2 ---->TEIL                          ---------->DOF2 ------>ZmHOX2a(1)             --------->ZAT6 -------->TOE2(3)             <---------ANAC46      --------->LBD16 ----------->GT1            ------ ----------DOF2               <---------bZIP60(2) ----------->RAV1(2)        --------->TOE2(3)-------   aactttaaataacacatatcgaaaacattgtgatgtgttaaagtcttgtaactcctgaaacagagaaagaaggtgaatttcttaactctagtgagtaaaa  13680000              --------->At4g35610    <---------AHL20(1)    --------->AHL20(1)    <---------AHL20(2)           <-----------GT1 <---------ANAC58   --------->YAB1               <-----------GT1  <---------ANAC58   --------->AHL20(2)  <----------DOF2 <----------DOF2         ----------->HVH21                <---- --->DAG2     <---------At4g35610<---------At5g28300      ------->TEIL      --------->ZAT6     ------ --->DOF2  ---------->DOF2 <---------YAB1        <---------ANAC46      ----------->GT1       <-------   gtgaattatattgtaaagctgaaggctttatcatttaccctctttgcaatagcttatatgaatcaatgacacagcgtaacacaaaaactcacaattcagg  13680100                                                                                 --------->ANAC46                                                                                 --------->ANAC58                                                                               --------->MYB46(3)                                                                             ------>MYB46(1)                                 --------->DAG2                              ------>MYB83  --------->DAG2                                ---------->DOF2                     ------->TEIL --------->ANAC58 --ZmHOX2a(1)            --------->ATHB12                    --------->CCA1(2) ---------->DOF2 --->LBD16              <---------YAB1                    <---------YAB1<-----------GT1  ---------->DOF2 --LBD16           <----------DOF2----------->GT1        <---------TOE2(3)--------->ANAC46 <---------TOE2(3)   aaattagctaatgcccatttgctatttcgattggaaaagtgaaaactcatcgcaaaattgatgatatacgaatttaacccaacaagcaaaaaaaaggttg  13680200                                         ------->TEIL                                      --------->ANAC58         <---------At4g35610                                      --------->ANAC55(2)      <---------LBD16                                      --------->ANAC46         --------->At4g35610               ----                                <---------GLK1(2)          -------->P --------->ALFIN1        -------                   --------->DAG2     --------->ANAC58  <---------ANAC58               --------->TOE2(3)                  ---------->DOF2   <-----------GT1     <---------ANAC58               --------->TOE1(3)   tcgatttcaaaaccaaaaaaaaaagcggaagacagattatacgcatcgaaatcgaatttcttaccagcggaagtgtgagtgagagtaacccttaaaccct  13680300                                 <---------TOE2(3)                                 *TSS                               <---------AHL20(2)                            --------->YAB1                      --------->ANAC46                      --------->LBD16                  <------ZmHOX2a(2)                 <---------ARR14(2)                         <---------YAB1         <---------ANAC58  <---------YAB1               <-----------TBP  <----------DOF2         <---------ANAC58 --------->AHL20(2)           <---------ICU4    --------->TOE2(3)   <-----------HVH21 --------->LBD16   --------->HSFB2a(2)<---------AHL20(2) ------>DOF2<---------ARR14(2)<---------YAB1 --------->MYB46(3)       <-----------GT1 ---->RAV1(2)    --------->ARR14(2)    <---------HSFB2a(2)--------->AHL20(2) --------->ZAT6   gaagcagtcaggcttatccgatccccgatataataaatgttacagaaacgaccctaatatttatatttgttttaactttagactagaagtttgttttgag  13680400                              --------->MYB52(1)                           --------->ANAC58                           <---------ANAC55(2)          <---------MYB52(1)                           --------->ANAC55(2)        --------->ATHB12                           --------->ANAC46    --------->ANAC46                           --------->ANAC58    --------->bZIP60(1)                  <-----------GT1              --------->ANAC55(2)                <---------AHL20(2)             <---------ANAC55(2)                               <---             <---------AHL20(1)               <---------TOE2(3)             <---------TOE2(3)   -----             --------->ARR11(3)             ----------->HVH21              --------->YAB1     <------             <---------ARR11(3)          <---------ARR14(2)            <---------AtLEC2       -------             --------->AHL20(1)          --------->ARR14(2)       <----------DOF2     <---------ANAC46   ----------->HVH21       --------->ANAC55(1)---------->ID1--------->WRKY18(1)      <---------TOE2(3)   ttaatgtgacccaaatattttttctatagacgtaacgttttcagatttgacgtaatccattggtcaaacttttgcattgagaatgttgacgtagatgatc  13680500                                                                  <---------ANAC46                                                                  <---------ANAC58                                                  ----------->HVH21                                                <---------ANAC58  <---------ANAC55(2)                                                <---------ANAC58  <---------ANAC55(1)          <----------DOF2                       --------->ANAC46  <---------YAB1         ----------->GT1                        --------->ANAC55(2)        --------->ZAT18                   <-------GAMYB         <-----------GT1        <---------ZAT18                  ----------->GT1    --------->AHL20(2)                   <---       <---------ANAC58     --------------->AGL15 ----------->TGA1<---------ANAC58              <----       <---------ANAC46     <----------DOF2     <---------ANAC55(2)                            <-----       <---------ANAC58   ---------->ID1 <---------MYB46(3) --------->AHL20(1)                 <-----  <---------AtLEC2       <-----------GT1<---------AtMYB61   <---------AHL20(2)                 <----- -------DOF2         <----------DOF2    --------->ALFIN1    <---------AHL20(1)                 <----- ->ZmHOX2a(2)  <---------ARR11(3)     --------->ALFIN1     --------->AHL20(2)                 <------ ---ARR11(3)   --------->ARR11(3) --------->HSFB2a(2)      <---------AHL20(2)                <------- -->ARR11(3)  <---------CCA1(2)   <---------HSFB2a(2)----------->GT1                       <---------MYB46(3)   ttttgcatagcgcgttatatcttcttttttctttttctaggtgtggttatacgtgacgaaaataaattacgtttagtaaatggagaactacattggtcgg  13680600              ------->GAMYB    ------>MYB46(1)       <---------TOE2(3)    ------>MYB83------>MYB46(1)  <---------MYB59     --------->HSFB2a(2)       <------MYB83 ------MYB52(1) ------>MYB83                    <------MYB46(1)            <---------ANAC58 ---GAMYB     <---------MYB59                   <---------ANAC55(2)        <---------ANAC46 -MYB46(1)--------->MYB46(3)              --------->AHL20(2)               <---------ANAC58 -MYB83 --------->ANAC46  <---------TOE1(3)    --------->MYB59    <-----------GT1 ----MYB46(3) --------->AtMYB61           <---------YAB1      <---------AHL20(2)         ----------->RAV1(2) ----DEAR3(2)--------->MYB46(3)           <---------AHL20(2) --------->AHL20(2)          <---------At4g35610 ---DEAR3(1)--------->ANAC58       --------->GLK1(2)         <---------AHL20(2)          --------->At4g35610 --ORA47(1) --------->ANAC58--------->TOE2(3)  --------->MYB111(1)--------->YAB1  <---------GLK1(2)   ttaaccaaacaaacaaccaaacttctctaacgttgatattctatattattaggtatacactaattaaatcacaacttgcgttcacattctcacctgatat  13680700                                    ------->MYC3                       ----------->GT1                 ------>ZmHOX2a(1)  <-------MYC3                <---------------AGL15                --------->TOE1(3)  <-----------RAV1(1)                --------->TOE2(3)  --------->O2      --------->DAG2          <---------ANAC58                --------------->AGL15               ---------->DOF2          <---------ANAC58               <-----------------AGL1       <---------HSFC1(1)           <---------AHL20(2)               <-----------------AGL3       --------->HSFB2a(2)       <---------AHL20(1)               ----------------->AG<---------O2   --------->ARR11(3)  --------->AHL20(1)    ---------               ----------------->AGL1       --------->HSFC1(1)    <---------AHL20(2)     <---------HSFB2a(2)               ----------------->AGL2       <---------HSFB2a(2)  --------->AHL20(2)      --------->HSFB2a(2)               <-----------------AGL2   <---------ANAC46   <---------LBD16   <---------ANAC46 -------   gaaaccaatactcaatttccttaactggaaaaattccatgtggcctctagaagataaagttttcggatttaatattttttcgtgaattcttacagaaagg  13680800  Previous    Next  AGI:  At2g32179.1    Description:  other RNA Range:  from: 13678918    to: 13680453    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g32180.1    Description:  PTAC18 (PLASTID TRANSCRIPTIONALLY ACTIVE18). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G32650.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G32650.1); similar to unknown [Brassica rapa] (GB:ABL97961.1); contains InterPro domain RmlC-like jelly roll fold (InterPro:IPR014710); contains InterPro domain Protein of unknown function DUF861, cupin-3 (InterPro:IPR008579); contains InterPro domain Cupin, RmlC-type (InterPro:IPR011051) Range:  from: 13679327    to: 13680333    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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