Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            --------->ARR14(2)                                                      <---------LBD16                        --------                                                 <---------ALFIN1                           ---------                                               ------>ZmHOX2a(1)                           --------->DEAR3(1)                                              <---------ALFIN1                           ------>ZmHOX2a(1)                                            ------>ZmHOX2a(1)    <----------DOF2         <---------ATERF1(1)                                           <xxxxxxxxxxxxxxxxsmallRNA(se3)               <---------ALFIN1                                           <---------ALFIN1 <---------At5g28300    ------>ZmHOX2a(1)                                        <---------ALFIN1 <-----------HVH21        <---------ALFIN1                                        <xxxxxxxxxxxxxxxxsmallRNA(se3)        <---------At4g35610                                      ------>ZmHOX2a(1) --------->LBD16       --------->At4g35610                                     <xxxxxxxxxxxxxxxxsmallRNA(se3)       <-----------HVH21<---------ALFIN1                                     <---------ALFIN1------>ZmHOX2a(1) ------>NtERF2 <---------ALFIN1 -----ALFIN1                      <---------ALFIN1------>ZmHOX2a(1)    --------->LBD16------>ZmHOX2a(1) ->ANAC46                --------->ANAC46------>ZmHOX2a(1)<---------ARR14(2)  <---------ZAT2------>NtERF2   acttgcaacgtcttgctcaccaattccacatcgctccctcctcctcctcctcctcctccggttaccgctcttccgccttcagctcctcctcctccgcctg  13651100                                                                                           ------>ZmHOX2a(2)                                                                                           xxxxxxxxxx                                                       --------->GLK1(1)                 <---------ARR14(2)                                                  ---------->DOF2                  <---------ANAC46                                          --------->ARR14(2)                       <---------ANAC58                                          <---------ARR14(2)                       <---------TGA1a                                         <---------HSFC1(2)            ----------->GT1 ----------->HVH21                                         --------->HSFB2a(1)       <---------ZAT14 <---------O2                                         --------->HSFC1(2)        --------->ZAT14 ==================                                         <---------HSFB2a(1)  <---------ZAT14      <---------ANAC58  --------->At4g35610                ----------->GT1   <---------GLK1(1)           --------->O2 ----- --->RAV1(2)               ------>ZmHOX2a(2)  <---------ANAC46--------->ZAT14      --------->TGA1a<-- >LBD16         --------->YAB1 ------>ZmHOX2a(2)  ===========================================bZIP_DOF   aattagcttccatttcaatcttcaattgatcgatcggagtagaaaattcggtgaaagaaatctcttcactgaagagttgaaattgacgtctgatctggta  13651200                                                                                                    <                                                                                                   <-                                                                                                   --                                                         ----------->GT1                        -----                                             --------->ANAC55(2)                             <-------                                             <---------ANAC55(2)      --------->SPL7       <-------TEIL     <---------------------WRI1    --------->ALFIN1   --------->YAB1<---------SPL7       <---------ARR14(2) xxxxxxxxxxx>smallRNA(si3)      <---------AtMYB61    --------->ICU4 ----------->HVH21    --------->ARR14(2) ======bZIP_DOF           <---------AtMYB61 <---------LBD16       <---------LBD16      --------->LBD16 ----->DOF2            <---------ARR14(2)  *TSS  ------------>CBF--------->MYB52(1)  <---------LBD16< -------TOE2(3)       <------ZmHOX2a(1)    --------->MYB52(1)   <-----------GT1    <-----------GT1 <-   aaggaagtgcgattggaagaatgaggaattggtggaggtgagagattacggagcaataagggtttaataccggaccggatgttttaaaccggatacattg  13651300                                                                                        <--------ATHB1                                                                                        <---------ICU4                                --------->GLK1(1)                                       --------->YAB1       <---------SPL7           <----------TaMYB80                                      -------->HAHB4       --------->ARR14(2)      <---------ARR14(2)                                    --------->YAB1     <------NtERF2             --------->ARR14(2)                               --------->ANAC55(2)   <---------DEAR3(1)       --------->ETT(1)                         --------->MYB52(1)--------->ICU4   --------->ETT(1)      <------MYB83                 <---------AHL20(2)        <---------ANAC46 ------MYB83             <------MYB46(1)             --------->AHL20(2)         <---------ANAC55(1) --------MYB46(3)       <---------AtMYB61            <---------AHL20(2)  ------------>CBF    <------- ------->MYB59         <---------WOX13(1)     --------->MYB52(1)     --------->ARR14(2)<---------ATHB51 ---->ATHB12          <------------CBF        ----------->RAV1(1)    <---------ARR14(2)<---------YAB1 -----CBF     --------->HSFB2a(1)          --------->ANAC58  <---------ANAC58   <---------ANAC58 ------MYB46(1)      --------->ATHB12      --------->ANAC58  <---------ANAC46   <---------ANAC55(2) --------AtMYB61    <---------YAB1         --------->ANAC46  <---------ANAC58   <---------ANAC58   tttggtcggggtccgaacatttctgattggtcggatattcagattaagcaacagattaatttttcttggagtaactgcaattacgtataataattctttt  13651400                                                                                           ------->TEIL                                                                                        --------->ANAC58                                                  <---------TOE1(3)                     <---------ANAC55(2)                                              --------->TOE1(3)                         --------->ANAC55(2)                                              <---------DAG2                            --------->ANAC58       <------MYB83                           --------->TOE2(3)                        --------------       <------MYB46(1)                <---------DEAR3(2)                         --------->At4g35610  <---------TOE2(3)                  ------>ZmHOX2a(2)                  *TSS     <---------ATERF1(1)  <---------TOE1(3)                <---------ARR14(2)              ----------->GT1  ------>NtERF2 ---------->DOF2                   --------->ARR14(2)        <---------TOE2(3) <------NtERF2    <---- ---DOF2              --------->YAB1<------ZmHOX2a(2)       ---------->DOF2 <------ZmHOX2a(1)<-------   ttttaaagttggttttagtttcactgatagtcaaaccgatcggttcaaccttatggtttgattaaagatgtgttataaggagccgatgccacgtactttt  13651500                                                                                <-----------ARR10                                                                             <---------ANAC58                                                                             <---------ANAC58                                                                       <---------ATHB12                                                                      ------>MYB83                                                           <------NtERF2     <---------ANAC46      <----------DOF2                                    <---------ZAT18<---------ICU4 ->AtSPL8                                               ---------->ID1------>MYB46(1) -------GT1   --------->ETT(2)                      <----------DOF2 <---------MYB59 ---DOF2      <---------ETT(2)               --------->ATHB12      <-----------------AGL3  ----------   actaatctcttttttgtcgaccatttttgtttctgagttgttcttcttgattagctttgtccgcttggaaccaaacatggcgagtcttggccatatagcc  13651600                                                      ------>MYB83                                                      ------>MYB46(1)                                                    <---------MYB111(1)                                                    <---------MYB59                                                   --------->ANAC58                                                   <---------ANAC55(2)                  --------->ANAC46                 --------->ANAC58                  --------->ANAC55(1)              --------->ANAC55(1)                  --------->ANAC58                ------>NtERF2                <---------ALFIN1              --------->ANAC58                      <----------DOF2     ----------------------->TaNAC69(2)       --------->ANAC58                 <---------DAG2    --------->YAB1--------->ANAC58          <---------DOF5.7(2)                <----------DOF2  --------->GLK1(2)                         --------->MYB52(1)            <-----------GT1    <------- >DOF2--------->At4g35610           ---------->DOF2--------->ANAC55(2)<---------ARR11(3)   <---------CCA1(2)   agagaatcatcagacatcacacgcctcgcccagttttacaaagaggtaacgacacctaatcgacgttttcaatttcttacacttttctttttcttatctc  13651700                                                           --------->ZAT18              <---------LBD16                             --------->ANAC58                         --           <---------ZAT14                                --------->ANAC58                    <------    --------->ARR14(2)       <-----------GT1            --------->MYB52(1)               --------->GLK1(2)    <---------ARR14(2) <-----------RAV1(1)            <---------MYB52(2)      ----------->RAV1(2)<--- --CCA1(2) --------->ZAT14----------->GT1          <----------ID1        <-----------GT1<---------GLK1(2)   tcttcgtattctctgttctgggtttgtgttgttactaccaatttcgacccaaaaaaacaaacgcactgagtcgattacccatctggattagaatctatgg  13651800                                                   <----------DOF2                                 <-          <----------DOF2                  <----------DOF2                                         <-         <---------ANAC58                 <---------ANAC46                                     <-----         <---------ANAC58                 <---------ANAC58                                     <-----        ---------->ID1                    <---------ANAC58                                     <----- --------->GT1                         <---------RAP2.6(2)     <---------ANAC55(2)             ------ ---TOE2(3)                 <-----------RAV1(1)---------->ID1  --------->ANAC55(2)             ------ ------ANAC46 <---------AHL20(2)     <-----------RAV1(1)   <-----------HVH21                   <-----   tttgtaatttggctttttatttagagatttgtgttgctattgtggctttgtctctttctcttgtcacttatctcgtttctagtttctattgagagtgtcc  13651900 ---------DOF2                                                                                 ------ --------DAG2                                                      --------->MYB52(1)        -------- ----ZAT18                                                       --------->MYB46(3)          <------- ------------AGL2                                               >>>>>>>>>>>>>>>>>LFY       <--------- ------------AGL1    <---------YAB1                         <---------HSFB2a(2)     <---------YAB1 --->ZAT18<----------DOF2  <---------TOE2(3)                --------->HSFB2a(2)     <---------AHL20(2) ----------->AGL3 ------>ZmHOX2a(1)                    <---------MYB46(3) --------->AHL20(2)>>>>>>>GRF7 ------------AGL3 <----------DOF2<---------ZAT6      <---------ANAC46<---------ATHB12    <-----------HVH21   acttttggatgcctttaatccttttgattaagttagtgttatcttcatcttcgtggtttgttctgaaaccaatggattatatatgtataattgtcaggtg  13652000  Previous    Next  AGI:  At2g32080.1    Description:  PUR ALPHA-1 (purin-rich alpha 1); nucleic acid binding. similar to hypothetical protein [Vitis vinifera] (GB:CAN72395.1); contains InterPro domain PUR-alpha/beta/gamma, DNA/RNA-binding (InterPro:IPR006628) Range:  from: 13649314    to: 13651243    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g32090.1    Description:  lactoylglutathione lyase family protein / glyoxalase I family protein. similar to lactoylglutathione lyase family protein / glyoxalase I family protein [Arabidopsis thaliana] (TAIR:AT2G28420.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67865.1); contains InterPro domain Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); contains InterPro domain Glyoxalase/extradiol ring-cleavage dioxygenase (InterPro:IPR011588) Range:  from: 13651472    to: 13652876    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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