Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   ----------->RAV1(1)                                 ------->GAMYB                              ----------->RAV1(1)                             --------->MYB46(3)                           ----------->RAV1(1)                     ------>ZmHOX2a(2)                        --------->ANAC58                          <------ZmHOX2a(2)                        --------->ANAC58                        ------->GAMYB                       --------->DAG2      ---------->DOF2     --------->MYB46(3)               ----------->RAV1(2)<---------At4g35610        <---------DOF5.7(2)        --------->DAG2               ========================RAV<---------AHL20(2)<---------WRKY38(1)        ---------->DOF2               ===========================RAV               <---------WRKY45        --------->YAB1               --------->At4g35610--------->At4g35610   --------->DAG2             <---------YAB1 ---               ==============================RAV       ---------->DOF2<-----------RAV1(2)         --- -------->GLK1(1)     ---------->DOF2     --------->AHL20(2)<---------WRKY12       --------->ICU4 ---   cgatatcgaagtaaaacacctgaataaagcaacaacagcagaaattaaagagagtggaaaagtcaacgatcgccagaagagagtgatgataaagttgaaa  13650800                                                                       --------->ANAC58                                                                       --------->ANAC46                                                                       --------->ANAC58  <-----------         --------->ZAT2                                             ===============================HOX2a_HOX2a         --------->At4g35610                                        <------ZmHOX2a(2)    <------NtERF2         <---------ZAT2                                    <---------------------WRI1   --------->LBD16         <---------At4g35610                             <---------MYB46(3)       --------->CCA1(2) ------>TOE1(2)                          ==================================HOX2a_HOX2a <---------ANAC46 ------>TOE2(2)            ---------->DOF2      ----------->HVH21  --------->ARR11(3) <---------LBD16 ------>TOE2(3)    <----------DOF2       ------>ZmHOX2a(1)----------------------->TaNAC69(2)<------ZmHOX2a(1)   ccttggaatcaagctgcaattctttgctaaaaagctcgtgttcctcagaattgacatagtagttgaagagatcaaggaaccaagagatgccggaggaagg  13650900                        --------->O2                        --------->TGA1a                        <---------TGA1a                        ===========================bZIP_DOF                       <------NtERF2                      ------>NtERF2                      <---------ATERF1(1)                      <---------DDF1                     --------->DEAR3(1)                     ----------->HVH21                    --------->DEAR3(2)                    <------NtERF2          <---------WRKY18(1)         --------->WRKY38(1)         --------->WRKY12         ----------->HVH21       ===========================MYC_MYB       <-------GAMYB--------->RAP2.3(1)            ------>MYB83          <------ZmHOX2a(2)      <---------MYB46(3)<---------O2 --------->ARR11(3)                 <---------ARR11(3)     <---------YAB1 --------->ATERF1(1)            ------>MYB46(1)      --------->ARR11(3)   --------->YAB1  <---------ATERF1(1)        <-----------GT1      =============HOX2a_HOX2a   <---------ICU4  ------>NtERF2     <---------ARR11(3)            ------>ZmHOX2a(1)   <--------ATHB1  <---------RAP2.3(1)  <----------DOF2     <---------GLK1(2)  <---------YAB1  <---------DEAR3(1)<---------GLK1(1)       --------->ARR14(2)                  <----  --------->ICU4<-----------HVH21   <---------CCA1(2)       <---------ARR14(2)         <---------ANAC58  <---------ATHB12--------->DEAR3(1)--------->GLK1(1)      =====================HOX2a_HOX2a  -------- ----------WRI1--------->O2        <---------MYB52(1)      <------ZmHOX2a(1)           <---------ANAC58   aacaatgatggttgacctcgtcgccgacgtcttctccgatatctttagataccttccacgaggattctccttaagatcaaaatagaatagcttatgctcc  13651000                                                          --------->ARR14(2)                                                      <---------LBD16                        --------                                                 <---------ALFIN1                           ------>NtERF2                                               ------>ZmHOX2a(1)                           --------->DEAR3(1)                                              <---------ALFIN1                           ------>ZmHOX2a(1)                                            ------>ZmHOX2a(1)    <----------DOF2         <---------ATERF1(1)                                           <xxxxxxxxxxxxxxxxsmallRNA(se3)               <---------ALFIN1                                           <---------ALFIN1 <---------At5g28300    ------>ZmHOX2a(1)                                        <---------ALFIN1 <-----------HVH21        <---------ALFIN1                                        <xxxxxxxxxxxxxxxxsmallRNA(se3)        --------->At4g35610                                      ------>ZmHOX2a(1) --------->LBD16       <---------At4g35610                                     <---------ALFIN1------>ZmHOX2a(1)    <-----------HVH21<---------ALFIN1                                     <xxxxxxxxxxxxxxxxsmallRNA(se3)    ------>NtERF2 <---------ALFIN1 -----ALFIN1                      <---------ALFIN1------>ZmHOX2a(1)    --------->LBD16------>ZmHOX2a(1) ->ANAC46                --------->ANAC46------>ZmHOX2a(1)<---------ARR14(2)  <---------ZAT2---------   acttgcaacgtcttgctcaccaattccacatcgctccctcctcctcctcctcctcctccggttaccgctcttccgccttcagctcctcctcctccgcctg  13651100                                                                                           ------>ZmHOX2a(2)                                                                                           xxxxxxxxxx                                                       --------->GLK1(1)                 <---------ARR14(2)                                                  ---------->DOF2                  <---------ANAC46                                          <---------ARR14(2)                       <---------O2                                          --------->ARR14(2)                       --------->TGA1a                                         --------->HSFB2a(1)           ----------->GT1 ----------->HVH21                                         --------->HSFC1(2)        <---------ZAT14 <---------ANAC58                                         <---------HSFB2a(1)       --------->ZAT14 ==================                                         <---------HSFC1(2)   --------->ZAT14      <---------ANAC58  --------->At4g35610                ----------->GT1   <---------GLK1(1)           --------->O2 ----- --->RAV1(2)               ------>ZmHOX2a(2)  <---------ANAC46<---------ZAT14      <---------TGA1a<-- >LBD16         --------->YAB1 ------>ZmHOX2a(2)  ===========================================bZIP_DOF   aattagcttccatttcaatcttcaattgatcgatcggagtagaaaattcggtgaaagaaatctcttcactgaagagttgaaattgacgtctgatctggta  13651200                                                                                                    <                                                                                                   <-                                                                                                   --                                                         ----------->GT1                        -----                                             --------->ANAC55(2)                             <-------                                             <---------ANAC55(2)      --------->SPL7       <-------TEIL     <---------------------WRI1    --------->ALFIN1   --------->YAB1----------->HVH21    <---------ARR14(2) xxxxxxxxxxx>smallRNA(si3)      <---------AtMYB61    --------->ICU4 <---------SPL7       --------->ARR14(2) ======bZIP_DOF           <---------AtMYB61 <---------LBD16       <---------LBD16      --------->LBD16 ----->DOF2            <---------ARR14(2)  --------->MYB52(1)   <-----------GT1      <---------LBD16< -------TOE2(3)       <------ZmHOX2a(1)    *TSS  ------------>CBF--------->MYB52(1)<-----------GT1 <-   aaggaagtgcgattggaagaatgaggaattggtggaggtgagagattacggagcaataagggtttaataccggaccggatgttttaaaccggatacattg  13651300                                                                                        --------->YAB1                                                                                        <---------ICU4                                --------->GLK1(1)                                       <--------ATHB1       <---------SPL7           <----------TaMYB80                                      -------->HAHB4       --------->ARR14(2)      --------->ARR14(2)                                    --------->YAB1     <------NtERF2             <---------ARR14(2)                               <---------ANAC55(2)   <---------DEAR3(1)       --------->ETT(1)                         --------->MYB52(1)--------->ICU4   --------->ETT(1)      <------MYB83                 <---------AHL20(2)        --------->ANAC55(2) ------MYB46(1)          <------MYB46(1)             <---------AHL20(2)         <---------ANAC58 --------MYB46(3)       <---------AtMYB61            --------->AHL20(2)  ------------>CBF    <------- ------->MYB59         <---------WOX13(1)     --------->MYB52(1)     <---------ARR14(2)<---------ATHB51 ---->ATHB12          <------------CBF        ----------->RAV1(1)    --------->ARR14(2)<---------YAB1 -----CBF            --------->ATHB12      --------->ANAC58  <---------ANAC58   <---------ANAC58 ------MYB83  --------->HSFB2a(1)          --------->ANAC58  <---------ANAC46   <---------ANAC46 --------AtMYB61    <---------YAB1         --------->ANAC46  <---------ANAC58   <---------ANAC55(1)   tttggtcggggtccgaacatttctgattggtcggatattcagattaagcaacagattaatttttcttggagtaactgcaattacgtataataattctttt  13651400                                                                                           ------->TEIL                                                                                        --------->ANAC58                                                  <---------TOE1(3)                     --------->ANAC58                                              --------->TOE2(3)                         <---------ANAC55(2)                                              <---------DAG2                            --------->ANAC55(2)       <------MYB83                           --------->TOE1(3)                        --------------       <------MYB46(1)                <---------DEAR3(2)                         --------->At4g35610  <---------TOE1(3)                  ------>ZmHOX2a(2)                  *TSS     <---------ATERF1(1)  <---------TOE2(3)                <---------ARR14(2)              ----------->GT1  ------>NtERF2 ---------->DOF2                   --------->ARR14(2)        <---------TOE2(3) <------NtERF2    <---- ---DOF2              --------->YAB1<------ZmHOX2a(2)       ---------->DOF2 <------ZmHOX2a(1)<-------   ttttaaagttggttttagtttcactgatagtcaaaccgatcggttcaaccttatggtttgattaaagatgtgttataaggagccgatgccacgtactttt  13651500                                                                                <-----------ARR10                                                                             <---------ANAC46                                                                             <---------ANAC58                                                                       <---------ATHB12                                                                      ------>MYB46(1)                                                           <------NtERF2     <---------ANAC58      <----------DOF2                                    <---------ZAT18<---------ICU4 ->AtSPL8                                               ---------->ID1------>MYB83 -------GT1   <---------ETT(2)                      <----------DOF2 <---------MYB59 ---DOF2      --------->ETT(2)               --------->ATHB12      <-----------------AGL3  ----------   actaatctcttttttgtcgaccatttttgtttctgagttgttcttcttgattagctttgtccgcttggaaccaaacatggcgagtcttggccatatagcc  13651600                                                      ------>MYB46(1)                                                      ------>MYB83                                                    <---------MYB111(1)                                                    <---------MYB59                                                   <---------ANAC55(2)                                                   --------->ANAC55(1)                  --------->ANAC55(1)              --------->ANAC58                  --------->ANAC58                 --------->ANAC55(2)                  --------->ANAC46                ------>NtERF2                <---------ALFIN1              --------->ANAC58                      <----------DOF2     ----------------------->TaNAC69(2)       --------->ANAC58                 <----------DOF2    --------->YAB1--------->ANAC58          <---------DOF5.7(2)                <---------DAG2  --------->GLK1(2)                         --------->MYB52(1)            <-----------GT1    <------- >DOF2--------->At4g35610           ---------->DOF2--------->ANAC58   <---------ARR11(3)   <---------CCA1(2)   agagaatcatcagacatcacacgcctcgcccagttttacaaagaggtaacgacacctaatcgacgttttcaatttcttacacttttctttttcttatctc  13651700  Previous    Next  AGI:  At2g32080.1    Description:  PUR ALPHA-1 (purin-rich alpha 1); nucleic acid binding. similar to hypothetical protein [Vitis vinifera] (GB:CAN72395.1); contains InterPro domain PUR-alpha/beta/gamma, DNA/RNA-binding (InterPro:IPR006628) Range:  from: 13649314    to: 13651243    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g32090.1    Description:  lactoylglutathione lyase family protein / glyoxalase I family protein. similar to lactoylglutathione lyase family protein / glyoxalase I family protein [Arabidopsis thaliana] (TAIR:AT2G28420.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67865.1); contains InterPro domain Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360); contains InterPro domain Glyoxalase/extradiol ring-cleavage dioxygenase (InterPro:IPR011588) Range:  from: 13651472    to: 13652876    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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