Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             <-----------ARR10                           <---------ARR11(3)                           <---------ARR14(2)                           --------->ARR14(2)                             <---------ALFIN1                           <---------ARR11(1)                          <-----------GT1           <------ZmHOX2a(1)                                    --------->ARR11(3) -------->ARR11(3)        <---------GLK1(1)                     <---------ARR11(3) ---------ARR11(3)        <---------CCA1(2)                    --------->YAB1                      -- ---HSFB2a(2)           <---------AtLEC2                      <---------YAB1 <----------DOF2 -------- -->HSFB2a(2)  ----------->GT1                         <-------TEIL <-----------GT1     --------->TOE2(3)   aagaacttatggaggaatggttttttgcatatctgtctagcttcacattagtctaaattcatctatgatattactaccactttgtaattttcttaacact  13594400                                      <----------DOF2                                      <---------DAG2                                   <---------ALFIN1                                  <---------ZAT18                                ------>NtERF2                                --------->PCF2                             <---------GLK1(2)   ------ ------->ZAT14              <---------ALFIN1                            <--------P         <---------MYB46(3) ->ZAT6     <-------TEIL <---------ZAT18         <---------YAB1      <---------YAB1  --------->YAB1--   ctatagtctatacgttcattgtatcagtcccctcggcccactttaactatgttgattcaatctcttctcttatggtagattgtctattcatagtggttaa  13594500                                                               ----------->RAV1(1)            <------                     <---------ARR11(3)                       <----------ID1                  <------          <---------ICU4          <---------ZAT14           --------->ANAC46         --------->ARR14(2)          --------->ATHB12        <---------ZAT18   --------->CCA1(2)                <---------ARR14(2)         --------->ICU4 <----------DOF2<---------ZAT18    <---------AHL20(2)   <---------TOE1(2)         <---------ATHB12         --------->ZAT14  --------->ARR11(3)--------->AHL20(1)      <------- ----------->GT1     --------->ARR11(3)--------->ZAT14  ----------->TBP<---------GLK1(2)     <------- ---->DOF2--------->YAB1--------->TOE2(3)          <---------ARR11(3)<---------ARR11(3)      -------- -------->DOF2      <---------CCA1(2)  <---------ZAT14----------->TBP<---------AHL20(1)      --------   agaaagaaaaaatcattagcatatatctttaaccagtacagtacagtactagagatatatataaacaacaaaatattctcgtatgtgtatttgcagatat  13594600         <------ZmHOX2a(2)                                                             <-------MYC4         ==============================HOX2a_HOX2a                                     ------->MYC3        --------->ARR11(3)                                                             <-------MYC3        <---------ARR11(3)                                                             <-------MYC2      --------->ICU4                                                                   ------->MYC2 ---CCA1(1)      <----------DOF2                                                   <---------ZAT14 ---RVE1(1)   --------->GLK1(2)                                                    --------->ZAT14 --ARR14(2)  --------->ARR14(2)             <---------YAB1                         <---------ZAT18 --ARR11(3)  <---------ARR14(2)  <------------CBF                                  --------->ZAT18 ->ARR11(3)  <---------GLK1(2)  ------>ZmHOX2a(1)                             <----------DOF2    <--- ->ARR14(2)----------->ARR10   <---------YAB1                            ---------->DOF2         ----   ttttcgtcaagatcagattcttttccacatattcctattgttcttcattatcgtatgcatacgttgatataccaaaaaagctttgtgcacatgtttacta  13594700                                             --------->ANAC58                                             --------->ANAC58                            <---------ARR11(3)                                          --------->ARR11(3)                      <-----------GT1        --------->ANAC46                  --------->AHL20(2)              --------->ANAC58               --------->ANAC55(2)               --------->AHL20(1)    ----------->RAV1(1)------------>CBF    <---------ALFIN1                    <---------AHL20(2) ------YAB1   --------->ANAC58        <-----------GT1<---------CCA1(2)    <------ZmHOX2a(1)        -- ------->TBP  --------->ANAC46  ------------>CBF   --------->YAB1        ----------->GT1<---------ARR11(3)   taaatgcgacattctcacgctaattttcaatatcaacaattctccccacgtattcatatcgcttaactagttagtaggaaataaaatgaagagctctact  13594800                                                               <-----------ARR10                                                               <---------ARR14(2)                                                               --------->ARR14(2)                                                          --------->ANAC58                                                          --------->ANAC58                                                    <-----------RAV1(2)                        ------                      <----------DOF2         <---------ANAC58 --------->GLK1(2)              -------         <---------MYB52(1)     <-----------GT1  --------->REM1(1)                           --------       ----------->GT1<---------DAG2          <---------ANAC58<---------CCA1(2)            <---------AHL20(2) ------->TOE2(3)   <---------ALFIN1     <---------YAB1 --------->ARR14(2)               --------->YAB1   acctctatgcagttaattccaacacttttcttcttaaccattcttcttgcttcaccaggtatgcaaatctagtttctcacaaactcacaatattaaaaag  13594900                                                                                   --------->ARR11(3)                                                                                  --------->YAB1                                                                      <---------AHL20(2)                                                    --------->ANAC58  --------->AHL20(1)                                                    --------->ANAC46  --------->AHL20(2)                                                    --------->ANAC55(2)          <---------YAB1                           <---------AHL20(2)       --------->ANAC58  <---------AHL20(1) ----->GT1    <---------ARR14(2)   <---------AHL20(2)  ------->TEIL--------->ATHB51<---------ARR11(3) -->DAG2      --------->ARR14(2)  --------->AHL20(2)<---------ANAC55(2)<---------AHL20(2)           - -->DOF2 --------->AHL20(2)--------->AHL20(2)     <-----------GT1  --------->AHL20(2)       ---------   ttactaaaacatataatatacgcttatattttaatatttaatgcatggggttttacgcatctacttgaataatttaatatttgatgatattgaagaataa  13595000                                            --------->AHL20(2)                                --------->AHL20(2)                                <---------YAB1                             --------->AHL20(2)                             --------->AHL20(1)                             <---------AHL20(2)         <---------ICU4                             <---------AHL20(1) --------->ATHB12         <---------WOX13(1) <---------AHL20(2)  <---------AHL20(2)   -------->ATHB1           --------->AHL20(2) <---------AHL20(2)   <--------ATHB1           --------->YAB1  --------->ATHB51   --------->ATHB51        <---------YAB1   -------->ATHB1            <---------AHL20(1)   <---------ICU4        <---------ICU4     <--------HAHB4            --------->AHL20(2)   --------->ATHB12      --------->YAB1     <---------AHL20(2)        --------->AHL20(1)  <---------ATHB51      <---------YAB1     <---------ATHB51-------->HAHB4       --------->CCA1(2)  <---------ATHB12      --------->ICU4     --------->ICU4 <---------YAB1       --------->ARR11(3)   -  --------->ICU4      --------->YAB1    <---------AHL20(2)--------->ICU4 <---------AHL20(2)      <---  <---------YAB1     <---------YAB1<---------YAB1       --------->YAB1<---------AHL20(2)  <-------GAMYB -------->WOX13(1)<---------YAB1<---------AHL20(2)     --------->ICU4--------->YAB1      <---------MYB46(3) >YAB1 --------->ATHB12<---------AHL20(2)  <---------ATHB12--------->YAB1<---------YAB1 <---------AtMYB61   gtcaattattgattgtttatatgattataattatattattattcaattatttattgaataatgataatgtattatattatagatatagagatggttgaag  13595100                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                  ---             --------->ANAC58                                   <------NtERF2               ---------             --------->ANAC58                                  ------>NtERF2               ----------  --------->MYB46(3)<---------ARR11(3)                        <---------ETT(2)     --------->HSFB2a(1) ---------->RAV1(1) --------->ARR11(3)                        --------->ETT(2)     <---------HSFB2a(1) ---ZmHOX2a(1)  ---------->DOF2                        <------ZmHOX2a(1)          <---------TOE1(3)<-   gacaacaaatgtgtgaagcaaagagcttggactggaagggtatgtgtctgaaatggaggaattgtcgccaagtatgcattagcgaaggtttcactgacgg  13595200                       <-------TEIL         <---------ARR14(2)                                   <---------ARR11(3)         --------->ARR14(2)                               <---------AHL20(2) -------MYB46(3) --------->LBD16                      ------>ZmHOX2a(1) ------>MYB55(2)--------->ANAC58                     --------------->AGL15              <---------AHL20(2) -------DEAR3(1)--------->ANAC58                     <---------MYB59        <---------ICU4 ------>MYB52(2)--------->ANAC46                     <---------------AGL15 <---------YAB1          -- >MYB52(1)     --------->MYB46(3)                   ----------------->AGL3 --------->ICU4         --- ->HVH21<------ZmHOX2a(1)------->TEIL             ------>ZmHOX2a(1)     <---------YAB1  --------->AHL20(2) ------GAMYB   <---------LBD16                 ---------->ID1 --------->ARR11(3) <---------YAB1 -----   tcgttgcaaaggattcacccgcaaatgcatttgtagcaaaccttgttttgtccttcctaattaagttcttgtttctcattattttgatattaaaatttta  13595300  Previous    Next  AGI:  At2g31957.1    Description:  LCR75/LCR79 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 75). Identical to Low-molecular-weight cysteine-rich protein LCR75 precursor (LCR75) [Arabidopsis Thaliana] (GB:P82784;GB:P82788); similar to LCR76 (Low-molecular-weight cysteine-rich 76) [Arabidopsis thaliana] (TAIR:AT2G31953.1); similar to Kunitz-type trypsin inhibitor [Ipomoea batatas] (GB:AAS65426.1); contains InterPro domain Gamma Purothionin; (InterPro:IPR008177); contains InterPro domain Gamma thionin; (InterPro:IPR008176); contains InterPro domain Knottin; (InterPro:IPR003614) Range:  from: 13594786    to: 13595329    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version