Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               <---------ANAC58                                                             <---------ANAC58                                                             <---------ANAC46<---------YAB1                                                             <---------ANAC55(1)                                                            --------->MYB52(2)                                                          <<<<<<<<<MYB98  <---------YAB1            -                                                    --------->AHL20(2)  --------->ATHB12         ----                                                  --------->AHL20(2)   <---------YAB1           <----                     ----------->GT1             --------->YAB1----------->GT1                 ------      <---------AtLEC2    <---------YAB1       --------->AHL20(2)   --------->ICU4             <-----   taagttttacatggacacaaatctcgttataatttgtattgagaagttttaaaataatatgttacttgtaaatatgattagtattgaacatacttatttt  13590100         <-----------GT1                                                           --------->AHL20(1)   <---------AHL20(1)                                                              --------->AHL20(2)   --------->AHL20(1)                                                              <---------AHL20(2)   <---------AHL20(2)                                                              <---------AHL20(1)   --------->AHL20(2)                                                             <---------AHL20(2) -------->YAB1                                                                    --------->AHL20(2) ----->YAB1                                                               ----------->GT1 -----YAB1                                                             <---------ANAC46 <---------AHL20(2) --->AHL20(2)                          ----------->GT1                 <---------bZIP60(2) <---------TOE2(3) ----AHL20(2)                          --------->YAB1    --------->AHL20(2)   --------->ICU4 --------   aataataaatttttcaatatacaaaaaaaaactaaaaacaatagtgaatttgtaagaaaaaaaatagaatgtgatgtggaataattttattttaagaaat  13590200          <---------ARR11(3)                                                     --------->YAB1          --------->ARR11(3)                       --------->YAB1                --------->AHL20(2)         --------->GLK1(1)                  --------->ARR11(3)                  <---------AHL20(2)<--       --------->YAB1         <-----------GT1--------->CCA1(2)           ----------->GT1     <-------      <---------ATHB12     <----------DOF2  <---------ARR11(3)      <------------CBF        --------- ->ARR11(3)       <-----------GT1  --------->At4g35610<---------GLK1(2)  <---------ZAT6     <--------   tgttttcaatgatatctaattatctatcccttttactagctcaagagatataaacataatctcatatatgaattggtgttaaataatatcagatttattg  13590300                                                               <---------AHL20(1)   <---------TOE2(3)                                        --------->AHL20(2)           <----------DOF2 -------ZAT6                      ---------->ID1           <---------AHL20(2)      <---------MYB52(2) -----CBF                       <-----------RAV1(1)      --------->YAB1           ------>MYB83 >ATHB12                 <-------MYC3                --------->YAB1               ------>MYB46(1) -AHL20(2)               ------->MYC3               <-------TEIL             <-----------GT1   gtgttaagaaaaactaatttgattccacatgtttttgttgttctcatattcacattcataaataatatatgttgatattttaccaactaagctttatact  13590400         --------->AHL20(2)                ------------>CBF        ----------->TBP                  --------->ANAC46      --------------->AGL15              --------->ANAC58                                          --      <---------------AGL15              --------->ANAC58   <---------ARR11(3)   <----------DOF2  <--  --------->ZAT14             <---------ICU4     ------------>CBF           <-----------GT1    ------   tctgtttactataaaatgcagacctcttcacattatttcttacaagtcaattccaatatcaagagctctattctctcttaactcttttgatcaagtagtt  13590500                                                         <-----------HVH21                               <---------ALFIN1         <-----------RAV1(1)                              <---------ZAT14           ====================RAV------>ZmHOX2a(1)         <---------ARR11(3)   --------->ZAT14    --------->ICU4               --------->TOE2(3) ------->YAB1        <---------MYB52(1)          <---------YAB1            <---------ARR14(2) -------YAB1       ----------->GT1         ------>ZmHOX2a(1)               --------->ARR14(2) --->ICU4--------->ARR11(3)   <---------REM1(2)--------->YAB1   <-----------RAV1(2)   --------->ARR14(2)   atcaaaatgaagagctctatgcagttaatctctacactcttcttcctagtcatacttgttgtcgcaccaggtatacaaatcctaaacaaatctactaaac  13590600                                                                                      ----------->GT1                                                                                      <---------YAB1                                                                                    <---------ICU4                                                                                   --------->ICU4                 <----------DOF2                                                 --------->YAB1  --------->TOE2(3)        <---------MYB52(1)                                   <---------YAB1 --------->ANAC55(2)  <-----------GT1  <---------TOE2(3)                      --------->YAB1 --------->ANAC46<---------DAG2       <-----------GT1                        <---------YAB1      ----   tatacgttataaacttatactttatttcccttgtttagtttaacatttgtttttatgcatacactatttagttcaaactattatgataatgaaaaaacaa  13590700                                                                                               <-----                                                                                              <------                                                                                              <------MYB46(1)                                                                                              -------                                                                                              <------MYB83                                                                                            <--------P                                                                                           <---------ANAC58                                                                                           <---------ANAC58                                                                                          --------->MYB55(2)                                                                                          <---------MYB46(3)                                                                                      --------->CCA1(2)                                                                                     <---------ARR11(3)                                                                                     --------->AHL20(1)                                                                                 ---------->DOF2                                                                               --------->AHL20(2)                                         <---------ANAC55(2)                   --------->YAB1 -------  --------->REM1(1)                      --------->ANAC55(2)            <------ZmHOX2a(1) --------->ATHB12 ----->ZAT6      <----------DOF2----------->GT1<---------AHL20(2)<------ZmHOX2a(1)   --------->ARR11(3)   cactacaacttatctcatactttgccatagaatattgaaaatcacatatttacataaacacatattaggagttaggagcaataaaaagatattggttggt  13590800                                                     --------->AHL20(2)                                                     <---------AHL20(2)                                        <---------YAB1<---------AHL20(2)                                        <---------------AGL15                             ===========                                       --------->AHL20(1)                               --------->ARR11(3)                              --------->ICU4   ----------->GT1               --------->AHL20(2)                      <----------DOF2  <---------AHL20(1)                    <---------AHL20(2)           ------->GAMYB<---------AtMYB61     <---------TOE2(3)              <---------AHL20(1) --GAMYB  <---------MYB52(2)  <---------YAB1  <---------TOE1(3)              --------->AHL20(1) ---MYB46(3)      --------->DAG2       <---------AHL20(2)                 --------->YAB1<---------ARR11(3) ---->GT1 --------->MYB46(3) --------->KAN4(2)<---------YAB1              ----------->GT1 ------>ZmHOX2a(2) -->MYB52(2)     ---------->DOF2      --------->AHL20(2)         <---------YAB1       --------->ICU4   tataagttatcaacaaacaaaaagctttggtcattcttgattatatttatggttataaatttgatttcttattgaataataaaatgccatgatcttatag  13590900                        --------->TOE2(3)                  <------ZmHOX2a(1)           <-------GAMYB------->GAMYB          --------->MYB55(2)          --------->MYB111(2)                                      <---------ANAC58          <---------MYB46(3)                  --------->TOE1(3)    <---------ANAC58         <--------P     --------->YAB1     --------->DAG2        <---------YAB1        --------->ANAC58        <-------GAMYB  --------->MYB46(3) ---------->DOF2     --------->ALFIN1         --------->ANAC58       <---------MYB46(3)              --------->ANAC58      <-------GAMYB      --------->ALFIN1 ========================HOX2a_HOX2a   --------->ANAC58<-----------RAV1(2)     <------ZmHOX2a(1)   gtatgaagatggttgttgaaggacaaccacaattgtgcgaaacgaaaagcttaaactacagggggttgtgcttgaaatggaggagttgcaagcgagtatg  13591000  Previous    Next  AGI:  At2g31953.1    Description:  LCR76 (Low-molecular-weight cysteine-rich 76). Identical to Putative low-molecular-weight cysteine-rich protein LCR76 precursor (LCR76) [Arabidopsis Thaliana] (GB:P82785); similar to LCR75/LCR79 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 75) [Arabidopsis thaliana] (TAIR:AT2G31957.1); similar to unknown [Picea sitchensis] (GB:ABK21016.1); similar to putative plant defensin SPI1B [Picea abies] (GB:AAN40688.1); similar to unknown [Picea sitchensis] (GB:ABK23037.1); contains InterPro domain Gamma Purothionin; (InterPro:IPR008177); contains InterPro domain Gamma thionin; (InterPro:IPR008176); contains InterPro domain Knottin; (InterPro:IPR003614) Range:  from: 13590507    to: 13591097    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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