Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                                 <---                                                                                                 ----                                                                                                <----                                                                                                <----                                                                                              -------                                                                                           <---------                                                                                          --------->ZAT2                                                                                         ------>ZmHOX2a(1)                                                                                  <---------WRKY12 --                                                                                 --------->DOF5.7(2)                                                                               --------->bZIP60(1)<--                    --------->RAP2.6(3)                              <---------ZAT14   ----------->RAV1(2)              --------->AtLEC2         <---------ANAC58       --------->ANAC58 <---------bZIP60(1)---   --------->ARR11(3)            --------->GLK1(2)            --------->ANAC58 <---------ETT(2)<-----   <---------ARR11(3)      <---------ATHB12  ----------->RAV1(2)     --------->ZAT14<---------At4g35610  <---------CCA1(2)--------->MYB52(1)  <---------ANAC58     <--------P         <---------ANAC46------   acatatatctcgtttaatgcaaaacggcaatcgagattgtggagtacccctggctcatggaggtaagccagtttagtcatgtcgtcaactcctgcaggcg  13576300       --------->ARR14(2)       <---------ARR14(2)       ------->TEIL      <---------CCA1(2)                               <---------AHL20(2) ----->RAP2.3(1)                                     --------->AHL20(1) ---NtERF2                                           <---------AHL20(1) ----->ATERF1(1)                               --------->YAB1 -----DEAR4(2)                           -------->P  <---------AHL20(2)                    ------->TEIL -----ATERF1(1)                         ------->GAMYB--------->AHL20(2)                   <---------CCA1(2) -->ATERF1(1)                          --------->MYB46(3)                          <---------ARR11(3) --RAV1(2)                             <---------MYB55(2)                          --------->ARR11(3) ---->NtERF2                      --------->ANAC58--------->YAB1                   --------->GLK1(2) -------ARR14(2)                  --------->ANAC58--------->AHL20(2)        --------->HSFC1(1) ------>ARR14(2)        <---------HSFB2a(2) ----------->GT1                 <---------HSFB2a(2) ----DEAR3(1)     ----------->ARR10    <---------MYB111(2)                  --------->HSFB2a(2) --->ALFIN1------>ZmHOX2a(1)      --------->ANAC46<---------AHL20(2)        <---------HSFC1(1)   gagcctctgtatcctttggatagatactagaaatactagcaacaacctgtaataatataatctattctcaaaattcttctagaaaaatctgtgaatctta  13576400                                  --------------->AGL15                                  <---------------AGL15                             <----------DOF2                            <---------ICU4                          --------->GLK1(2)                      --------->YAB1                     <---------YAB1                                    <---------ANAC58                    <---------ARR11(3)                                 <---------ANAC58        <-----                    --------->ARR11(3)                    --------->ICU4                       <-----            --------->At5g28300   ===================================================================           ----------->GT1<---------ARR11(3)         --------->ANAC55(2)              <---------MYB52(1)       <-------TEIL--------->CCA1(1)       <---------TOE2(3) ------->TEIL        <-----------GT1 ---------->DOF2   --------->RVE1(1) --------->AHL20(2)   <---------YAB1 <-----------GT1 <---------ZAT14   ctgcaaaggtccatggtaaaaatatcataatcttttccatttattgtggttttatatgtaatgaatattagtttcttactgttttcccgtttgcagtgac  13576500                                                              ----------->HVH21                                                             =========================HOX2a_HOX2a                                                          <------ZmHOX2a(2)                                                         <---------GLK1(2)                                                         <---------ARR11(3)                                                         <---------ARR14(2)                                                         --------->ARR14(2)                                                      --------->HSFB2a(2)                           <            ------>NtERF2                    --------->AtLEC2------>ZmHOX2a(1)            <---------ICU4        <---------AtMYB61                 ==========================HOX2a_HOX2a          --------->ICU4 ------------AGL1   <---------GLK1(1) <---------ATHB12<---------HSFB2a(2)      ------>ZmHOX2a(2)  <-- ------------AG<----------DOF2    <---------ZAT14    <---------LBD16     --------->ANAC55(2) <------- ============MADS_MADS   <-----------HVH21------>ZmHOX2a(2)------>ZmHOX2a(2)   ======================   tattttggcattggtgcctttgatttcagtcacttctccactgatccatgcgagttctggatcctcgacccagacatgtgatccgagtgtgatatttaca  13576600            --------->AHL20(2)          --------->TOE2(3)  --------->ZAT18                                                        <------ZmHOX2a(1)  <---------ZAT18                                                     <-----------RAV1(2) --------->ATERF1(1)                                             --------->ANAC46             ------- ---------GLK1(1)            <----------DOF2                  <---------ARR14(2)              ------- ----ZmHOX2a(1)     ---------->DOF2                           --------->ARR14(2)         <---------ANAC58 ----GT1 --------->YAB1 ---------->DOF2                  <---------ARR11(3)----------->GT1    ------- ====HOX2a_HOX2a  <---------YAB1     --------->YAB1  ---------->DOF2----------->RAV1(1)  <---------ANAC58   ggagtcccctaacattatttatcaaagaaagcttttcaatagtcacagtaagaagaaaagatagtatatgcaacaggaggttaatggggaggcttaccat  13576700                                         <<<<<<<<<<AtWER                                       --------->At4g35610                                      <---------MYB46(3)                                    --------->At4g35610     <---------ARR11(3)      --------->GLK1(2)     --------->ARR11(3)      <---------ARR14(2)                                                   <--   --------->ANAC58          --------->ARR14(2)                        ----------->GT1      ---------   --------->ANAC58         <---------GLK1(2)  <---------ZAT14        --------->DAG2        --------- -->TOE1(3)          --------->ZAT6 <---------At4g35610             ---------->DOF2       ------->TEIL -->TOE2(3)    --------->ARR11(3)  ----------->RAV1(1)         ---------->DOF2       --------->CCA1(2) -->YAB1       <---------ARR11(3)--------->At4g35610        <------ZmHOX2a(2)   ---------->DOF2   ---   aactcaagctcttccaagctcttacactgagaatctgcagcagttggagaacagagagatagatcaaaagaaaaggtaagaagaaagagatgaatcataa  13576800                                    <---------------AGL15                                   --------->TOE2(3)                        =========================                                 --------->GLK1(2)                          --------->O2                                <---------GLK1(2)                           --------->TGA1a                        --------->CCA1(2)                              --------->At4g35610                       <---------ARR14(2)                              <---------At4g35610                       <---------ARR11(3)            =================================bZIP_DOF -------AHL20(2)       --------->ARR14(2)            <----------DOF2 <-----------GT1 -->GT1                --------->ARR11(3)    ---------->DOF2 <---------ALFIN1 >YAB1 ------>NtERF2 ----------->ARR10       =========================================bZIP_DOF      < ------>AHL20(2) --------->YAB1 <---------ARR14(2)   <---------DAG2<-----------HVH21           <-----   aaaaataggcgactctgaatcagaagatactggagattcttaacttagaaagtgacttttccctcacctagtcacctctcgtctccactaagtctcttaa  13576900                                          <------NtERF2                                          --------->At5g28300                                         --------->RAP2.6(2)                                         ------>NtERF2                                        <---------ANAC46                                        --------->ATERF1(2)                                        <---------ATERF1(2)                                        <---------DEAR3(1)                                       --------->DREB2C(1)                                       <---------At4g35610                                       --------->At4g35610                                       --------->ATERF1(1)                                       <---------DREB2C(1)                                       --------->RAP2.3(1)                                       <------NtERF2                                      <---------RAP2.6(1)                                      <---------RRTF1(1)                                      <---------ERF1                                      <---------RAP2.3(1)                                      <---------ORA47(2)                                      <---------ATERF1(1)                                      <---------DEAR4(2)                                      ------>NtERF2                                     <---------RRTF1(2)                                     <---------RRTF1(3)                                     <---------DREB2C(2)                                     <---------RAP2.3(3)      <---------RVE1(1)                                     <---------RAP2.3(2)      --------->GLK1(1)                                     <---------RAP2.6(2)     <---------GLK1(2)                                     --------->ALFIN1        <---------ARR11(3)                                     <---------DEAR3(1)      --------->ARR11(3)     <----------DOF2        <---------TOE1(2)         --------->DAG2             <---------ARR14(2)    <---------ANAC58 ==========bZIP_DOF              ---------->DOF2       <----------DOF2   --------->MYB59 ----------DOF2                 ---------->DOF2<---------ATHB12        <---------MYB52(1)      ------ ------GT1                 <-------TEIL<---------ABI4(1)     --------->ARR14(2)    <---------ANAC58   ctcttttttgcaggttttagagcttaagatgcagtaaaggcggcggcaaatcaacttctttcagatattctctcttaggtcatttgctttgaaaaccatg  13577000                         <-----------HVH21                       --------->MYB59                   <---------REM1(1)                 <------MYB83<---------ALFIN1                 <---------ANAC58                 <------MYB46(1)                                    <---------ANAC58                 <---------ANAC46                                   <---------ANAC58              <--                 <---------ANAC58                     ---------->DOF2                             ---                --------->MYB111(1)              <----------DOF2  <---------YAB1                  <--                <---------AtMYB61             ---------->ID1    --------->YAB1                 ------                <---------MYB46(3)           <-----------GT1   <---------YAB1                  ------                --------->MYB46(2)     <---------TOE2(2)   <---------DAG2<----------DOF2      ------>ZmHOX2a(1) --->AtLEC2   <---------MYB52(1)       <---------TOE1(2)   <----------DOF2        <---------YAB1<----   cattccatagaaaactgtttggtgtaaggtcacactcttcatatgtttctccttttcaaagctttatgatgcttccttttgagtatgaatggggtcctcg  13577100                                                                               <----------DOF2                                                                               <---------DAG2                                                                             ------>MYB83                                                                             ------>MYB46(1)                                                                           <---------MYB111(2) -------TOE2(2)                                                            <---------MYB111(1) ------>SPL7                          --------->DAG2                   <---------ZAT14 -------TOE1(2)                      ---------->DOF2                   --------->ZAT14 --->TOE2(1)                <---------HSFB2a(2)           <---------YAB1   <---------ALFIN1 --->TOE1(1)             <----------DOF2         <----------DOF2       --------->ZAT18     ------>ZmHOX2a(2) -----SPL7 ----------->GT1  --------->HSFB2a(2)--------->At4g35610     <---------ZAT18  --------->ATHB12   tacgttgaacaaaatgtgaaatctctgcttttagaacaataaagttgtctgctttacattttgatattgctactgcaccaacttttctcttgatcggcca  13577200  Previous    Next  AGI:  At2g31900.1    Description:  XIF (Myosin-like protein XIF). similar to XIC (Myosin-like protein XIC), motor/ protein binding [Arabidopsis thaliana] (TAIR:AT1G08730.1); similar to XIK (Myosin-like protein XIK), motor/ protein binding [Arabidopsis thaliana] (TAIR:AT5G20490.1); similar to XIE (Myosin-like protein XIE), motor/ protein binding [Arabidopsis thaliana] (TAIR:AT1G54560.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67162.1); similar to myosin XI-F [Nicotiana benthamiana] (GB:ABJ53198.1); similar to putative myosin [Oryza sativa] (GB:AAL58953.1); contains InterPro domain Myosin S1 fragment, N-terminal; (InterPro:IPR008989); contains InterPro domain Range:  from: 13567837    to: 13576700    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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