Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        --------->TOE2(3)                                                                                      --------->AtMYB61                                         --------->bZIP60(2)                          ------->GAMYB                                         --------->ANAC46                            --------->MYB46(3)                          <------ZmHOX2a(1) <---------ICU4                          -------->P                         <----------ID1<---------ALFIN1                         --------->ANAC46              <---------DAG2         ------>MYB46(1)                            --------->ANAC58              --------->TOE1(3)   <---------HSFB2a(1)                           --------->ANAC58              --------->TOE2(3)   --------->HSFB2a(1)                         ---------->DOF2        --------->HSFB2a(2)  --------->AtMYB61<---------YAB1 <---------ATHB12--------->YAB1       --- ----->AHL20(2)       ---------->DOF2------>MYB83<-----------HVH21      <---------ATHB12   --------->MYB46(3)   aaatttgtttctgcaaccttatccaaaaggaccaaaaccttccacatcatgagtcacatacaaatgaagactaaatcaataaaagcaaccacaacaactc  13566400                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                             <------MYB46(1)                                                                                 --------->ANAC46                                                                          <---------MYB52(2) <------MYB83                                                               <---------HSFB2a(1)    ---------->DOF2                                             <----------ID1    --------->HSFC1(2)--------->ANAC58                                             ----------->GT1   --------->HSFB2a(1)--------->LBD16                                            ----------->GT1    <---------HSFC1(2)--------->ANAC58                                            ------------------------>ANAC81     <---------LBD16  <---                                          ---------->DOF2  --------->ANAC58   --------->MYB46(3) <---                             <---------ARR11(3)            --------->ANAC58  -------->P--------->DAG2 --->ZmHOX2a(1)              --------->ARR11(3)          --------->MYB52(1) --------->MYB52(1)  <----   ctcattcacatacttatatgaaaatttcaagtatctctgaaatgaaaaggaaaaaaaaaaaacgaaatttctgagaactaaccacggaaaaaggaaggtg  13566500                       --------->ANAC46                       --------->ANAC58                       --------->ANAC58                   --------->AtLEC2           <---------SPL1(1)          <---------SPL7          <---------SPL1(2)         <---------ANAC58         <---------ANAC58  <---------GLK1(1)        <---------------AtSPL3                                                                      -       <------------------SPL14                                                                 <----      ------------------>SPL14                             --------->HSFC1(2)                   <---- --HSFB2a(1)--------->SPL1(2)                              <---------HSFC1(2)                   ----- --HSFC1(2)--------->SPL1(1)                      --------->MYB46(3)                            ----- ->HSFB2a(1)--------->SPL7 --------->GLK1(1)     ------>MYB83                          --------->LBD16 ------ANAC58   <---------DEAR3(1)              ----------->RAV1(1)         ----------->GT1    <----- ------ANAC58<---------DEAR3(1)             <------ZmHOX2a(1)          ---------->DOF2--------->LBD16 ---TEIL--------------->AtSPL3  ------>ZmHOX2a(1)------>MYB46(1)<---------YAB1        <---------LBD16   cttgagagagtccgtacggcgatgcaaggaactcctctgtgctagaggaccaacaaatcgatacttcttattagaaagaggcaaaatccctggaattgac  13566600                         <-------GAMYB              --------->CCA1(2)           ----------->GT1<--------P         <-----------RAV1(2)--------->ATHB12 --------->DOF2     --------->ZAT2                                                <------ZmHOX2a(1) -----ANAC55(2)     <---------ZAT2                                              --------->ALFIN1 -----ANAC46 <---------ARR11(3)                                                <------ZmHOX2a(1) ---->bZIP60(1)   --------->DAG2                                         ---------->DOF2  ----------- ---->ANAC55(2)  ---------->DOF2                                ----------->RAV1(2)     ----------->GT1 ----TOE2(3)<------ZmHOX2a(1) <---------WOX13(1) <------ZmHOX2a(1)----------->HVH21  <------ZmHOX2a(1)   gtaagagcgagtcaggatataaagctgggttgattgactaagaagagaagaggaaatgaaatgacgacctgatgcgaaagaggaggaggagagagaaata  13566700                                 <---------ANAC55(1)                                 <---------ANAC58                                 <---------O2                        --------->ARR11(1)                        <---------ARR14(2)                     <---------TOE2(3)                     <---------TOE1(3)         <---------ARR14(2)                  --------->DOF5.7(2)      <---------LBD16                 <-------GAMYB   <---------ANAC46                 ==========================MYC_MYB                <---------MYB46(3) --------->ALFIN1               <---------TOE2(3) <---------ANAC58             <---------MYB46(3)  <---------TGA1a           ================================MYC_MYB                  <------NtERF2           <-------GAMYB--------->ARR14(2)--------->LBD16          --------->LBD16          --------->MYB55(2)     <---------bZIP60(2)              --------->LBD16          --------->MYB52(2)    <------NtERF2  --------->ARR14(2)<---------LBD16          <---------MYB46(3)   ------>NtERF2<---------ANAC46   --------->DEAR3(1)  --------->ANAC46         --------->ALFIN1--------->CCA1(2)------>NtERF2    <---------HSFB2a(1)     --------->ANAC58         <---------AtMYB61    <---------DEAR3(1)          --------->ANAC58         --------->ANAC58   <---------GLK1(1)<---------DOF5.7(2)  <---------DEAR3(1)--------->HSFC1(2)    --------->ANAC46  --------->ARR11(3)--------->MYB52(1)  <---------LBD16   --------->ANAC58       <---------ALFIN1 >GT1   <---------MYB52(1)    --------->ALFIN1<------NtERF2<---------HSFC1(2) --------->ZAT14   <----   tggagatttcggtggttgtggttaacgatacggtggcgtgtctccggcggattgagacagaagcatcgccggaatggaactacacactccatcttcttct  13566800                                                                   <---------ANAC58                                                                   <---------ANAC58                                                                  <---------ZAT2                     <---------ANAC46                          <---------ANAC58           ---------->DOF2                   --------->ZAT14               <---------At4g35610                     --------->AtMYB61        <---------AHL20(2)                  *TSS --------->At4g35610                   >>>>>>>>>>MYB80        --------->AHL20(2)--------->ICU4  <------MYB83         <---------ANAC58  <----------DOF2       --------->YAB1----------->GT1      <------MYB46(1)     <---------STY1(2) <---------ANAC58 -----CCA1(2)      <---------ZAT14      --------->ALFIN1      --------->STY1(2) <---------ANAC58  ---   atctgagaattttaatggcagtgctgtgatttttaacagagagtgggttttagctaaaccctcttgctagcttagcgagtttgctttcaaaccaaagcac  13566900                     --------->TOE2(3)                                                             <-                    <---------YAB1                                                             <-----               --------->YAB1                                                                  ------              --------->AHL20(2)                                                       --------->AHL20(2)      --------->ARR11(3)                                                              --------->AHL20(2)      <---------ARR11(3)      ------>ZmHOX2a(2)                                    --------->AHL20(2)  ---------->DOF2 --------->YAB1                         --------->KAN4(2)        <---------AHL20(2) <---------AHL20(2)<---------ARR11(3)            --------->YAB1            ----------->GT1    <<<<<<< --------->AHL20(2)--------->ARR11(3)           <---------YAB1        <---------YAB1  <---------AHL20(2) ------>YAB1 <---------MYB52(1)             <---------DAG2   --------->ZAT18      --------->AHL20(2)   taataaaagatgtccattaattatcttagtgatccctcaaaaatcgccttattatagaacatgcccactattttgtttggataaataaataattttagat  13567000            --------->AHL20(2)        --------->ATHB12       <---------YAB1       --------->ICU4     --------->YAB1    <---------YAB1 <---------YAB1                        ----------->GT1 ----------GT1              <---------TOE2(3)                                                   <---- ----ARR11(3)    ----------->GT1      <-----------------------TaNAC69(2) --------->AtLEC2      <----- --->ARR11(3)<---------AHL20(2)       <---------TOE2(3)                <---------ALFIN1   <---------ALFIN1 <<RAP2.2   <---------AHL20(2)--------->YAB1                         ------>NtERF2      ------>NtERF2   attactatcatgatttaaattgataaaactaatgaaaatagaggtaaaaaactcaaactctcaaactatgccaccatgcccaaactatgccaccatgcct  13567100                                                                                                    -                                                                                                   <-                                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                   --------->LBD16                ---                                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                  --------->RAP2.6(2)       xxxxxxxxx                                                                  --------->ANAC46    --------->At4g35610                                                                 <---------LBD16 <xxxxxxxxxxxxxxxxxxx                                                          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    ---                   <---------AHL20(2)                     --------->AHL20(2)     xxxxxxxxxxxxxxxxxxxx                   <---------AHL20(1)                  --------->YAB1           xxxxxxxxxxxxxxxxxxxxx                   --------->AHL20(2)                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)xxxxxxxxx                   --------->YAB1                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxx                   <---------ICU4                  <---------AHL20(2)    <xxxxxxxxxxxxxxxxsmallRNA(s)                   <--------ATHB1            ----------->GT1    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<                  --------->ICU4         --------->GLK1(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<----- ------DOF2     --------->YAB1          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   <---------AHL20(2)--- ----DAG2    --------->TOE2(3)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)    --------->AHL20(2)<--   tttgccactaatctacattaataattttgctaaaaatatggctaatcttgtatataatcaaaaaatagccgcaaacagaagttttattagcttagtctcg  13567200        --------->YAB1      <xxxxxxxxxxxxxxxxsmallRNA(s)     <----------DOF2  ------>NtERF2 <---------DEAR3(1) -------->ATERF1(1) --------ATERF1(1) ------>DEAR3(1) xxxxxxx>smallRNA(i) xxxxsmallRNA(se3) ------>ETT(2) xx>smallRNA(l2) x>smallRNA(si3)                                     --------->TOE1(3) xxxxxxx>smallRNA(s)                         <---------ZAT18 xxxxx>smallRNA(s)                           --------->ZAT18 xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)         --------->ZAT14 ----ANAC46                                  <---------ZAT14 <-------TEIL                   ------->TEIL -------->HVH21                      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)           ------->TEIL -------DEAR3(1)            <---------------AtSPL8   --------->TOE2(3)        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   tcgacggctttgatcatacacatatggaatcaagtactaatccgaagtgcacaaacctcaacattcattttttgtcaacaatatgcattttgtgaatcta  13567300  Previous    Next  AGI:  At2g31890.1    Description:  similar to hypothetical protein [Vitis vinifera] (GB:CAN78554.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46382.1); contains InterPro domain RAP domain (InterPro:IPR013584) Range:  from: 13563577    to: 13566844    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version