Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     ---------->DOF2                          --------->AtMYB61                          <---------ALFIN1                         --------->bZIP60(2)                       --------->AtMYB61                      --------->MYB46(3)                    --------->ARR14(2)                 <---------HSFB2a(2)                        <--                    <---------ARR14(2)                 --------->HSFB2a(2)                        <--                   <------ZmHOX2a(1)--------->DAG2    <---------LBD16                <---------AHL20(2)        --------->ZAT18<---------ALFIN1        <-----------ARR10                    --------->AHL20(2)     --------->At4g35610 --------->ANAC46    ------>NtERF2     <-----------GT1      <---------AHL20(2)   agaagtaatctgcacaatgcaggaaccacctcaccaaaaaagtttgccgactcttctctggaaattttctgcatcacaagaagaaatttttttgtgagta  13556200                      --------------->AGL15                     --------->DAG2         ----------->HVH21   ----------->GT1                   ---------->DOF2  <------ZmHOX2a(1)   < -------DAG2          <---------------AGL15        --------->ANAC46--------->ALFIN1    <------ZmHOX2a(1) --------DOF2   --------->HSFB2a(1)      --------->YAB1 --------->ZAT6   ---------->DOF2      <------   ctttatgctccatgacaaatgttccccctaagagtaaaatgaataagaaaaacacaaaacactaagaaagtggatgaaagaaggacagaggaattgttac  13556300                                                                           --------->ARR14(2)                                                                           <---------ARR14(2)                                                                           --------->KAN4(2)                                                                          <----------TaMYB80                                              --------->At4g35610        ---------->TaMYB80   -------        ---------->DOF2                       <---------At4g35610      --------->LBD16   --------->ANAC58   ---------->DOF2                         <------ZmHOX2a(2)         <---------LBD16     --------->ANAC58 -----------HVH21                         <---------ARR11(3)      <---------GLK1(1)    <---------AtLEC2 -----GT1     --------->AtMYB61  --------->DAG2  <-------TEIL     --------->GLK1(1)--------->CCA1(2)   cttgtcaaagaaaagaccatacccttgtaatgcataaggggcgagatcagatgcattcaaggagagagatttccgcatattcgtgatatgcaaggcaaga  13556400                                                  --------->ARR11(3)                                                  <---------ARR11(3)                 --------->WRKY12                <---------GLK1(1)                 --------->WRKY38(1)       <---------ANAC46              --------->ATHB12            --------->ATHB12             --------->MYB46(3)      <---------ARR11(3)               <------NtERF2      --------->LBD16                --------->ARR11(3)          --------->DAG2     --------->LBD16              --------->HSFB2a(2)      ----------->RAV1(1)  <---------ZAT6 ---->ARR10<-----------GT1      ------>ZmHOX2a(1)<---------At4g35610--------->ALFIN1           ------   gcctctcccgagttaaccattgactcactcggtcctctagatattgtttggagctcttcttcgacagaaggtggccaaactagtgatgaagactgagcca  13556500                              =========================HOX2a_HOX2a                              ------>ZmHOX2a(2)                             --------->CCA1(2)                             ==========================HOX2a_HOX2a                             <------ZmHOX2a(2)                            --------->AGP1                 ---------->DOF2                            <---------AGP1             --------------->AGL15                            <---------ARR14(2)         <---------------AGL15                            --------->ARR14(3)        ----------------->AGL1                            <---------ARR14(3)        <---------ANAC46                            --------->ARR11(3)        <---------ANAC58                            <---------ARR11(3)        <---------ANAC58       <---------ARR14(2)   --------->ARR14(2)   <---------ICU4       --------->ARR14(2)   <-----------ARR10   <---------YAB1                    --------->At4g35610  ----------->GT1         ----------->ARR10     ------>ZmHOX2a(1)               <------ZmHOX2a(1)  -- ----->RAV1(1)         <---------MYB59         --------->TOE2(3)            --------->TOE1(2)     <--   caagaggcaaatactgaagaattgacctaagatctgccctcagttccatccttattgcctgaaaaggagattagaaaacttaggagatgaaagtttgcaa  13556600                                                              <------ZmHOX2a(1)                                                        <---------ANAC58                                                        <---------ANAC58             *TSS                                      <---------At4g35610         --------->CCA1(2)                             --------->At4g35610        --------->ARR14(2)                           <--------P        <---------ARR14(2)                         <------MYB46(1)        --------->ARR11(3)                         <------MYB83                                 -----       <------ZmHOX2a(1)                           <---------MYB46(3)                       <--------     <---------TOE1(3)                            <---------AtMYB61                        <---------     <---------TOE2(3)      ------->TEIL         <---------MYB52(1)                    <----------DOF2 ------->ATHB12            <---------CCA1(2)    <-------GAMYB<----------ID1          ---------->ID1 -------ATHB12       <---------TOE2(3)         <---------MYB46(3)---------->DOF2    <-----------GT1   atgatttaaggatatggacatttgatgttgtatctctatatgacttagtccgttggtagcttaaggacaaagaaacccatttgatttttctttttaacag  13556700                                ---------->DOF2              --------->YAB1  --------->LBD16             <---------ATHB12--------->HSFB2a(2)     ---------->DOF2         <---------HSFC1(1)                                            --------->LBD16   --------->ANAC58          --------->HSFC1(1)                                           --------->LBD16   <------NtERF2       <-------MYC3                                                 <----------DOF2   --------->ANAC58    ------->MYC3                                   <------MYB46(1)    --------->HSFB2a(2)  ------>NtERF2     <---------ALFIN1                                  <---------MYB46(3) <---------HSFB2a(2) ---->At4g35610  <------ZmHOX2a(1)                                    <------MYB83  <---------DAG2 <- ---GT1    --------->WOX13(1)<---------HSFB2a(2)                     <---------AtMYB61   <---------LBD16 --GT1   ------------>CBF   <---------LBD16      <-----------GT1  <-----------RAV1(1)   <---------LBD16   atggcaccaaagtcaatcaggaacacgttttccagaaagaccgagtcaaatttactcttgacaacaaaatgttggtggaccataaacttttcccggacta  13556800           --------->GLK1(2)         <---------HSFB2a(1)         --------->HSFB2a(1)         --------->HSFC1(2)                                                                        --         <---------HSFC1(2)                                  <----------DOF2                     <---     --------->LBD16                                  <---------DAG2                      >>>>>>>>>>WRKY38    --------->HSFB2a(2)                            --------->ARR11(3)                     >>>>>>>>>>WRKY43    <---------HSFB2a(2)                            <---------ARR11(3)                     >>>>>>>>>>WRKY26   <---------LBD16                             ---------->DOF2                           --------->WRKY38(1) ---------DOF2   --------->YAB1    <---------At4g35610<----------DOF2 ---------->DOF2    --------->WRKY12   actttcccagaagattccagcataaccctgtaatttcaactgataaacaaaaagaacttttttctttaaaacaaaagcctgattcaaacatttgaccaaa  13556900                        <---------ICU4                   <---------ZAT14                   --------->ZAT14                  <---------At4g35610                 --------->ANAC58                   --------->At4g35610              --------->ZAT18                       --------->ZAT2                          <--------             --------->ANAC58                       <---------ZAT2                          =========           --------->MYB52(1)                    <---------ANAC58                           <--------        <---------At4g35610                      <---------ANAC58               <------ZmHOX2a(1)        --------->At4g35610<-----------GT1 <---------ARR14(2)                  ----------->GT1     -- ------->YAB1--------->ANAC58<---------YAB1--------->ARR14(2)  <---------ARR14(2)     <---------ICU4 ------ARR11(3)  --------->ANAC58     --------->WRKY18(1)      --------->ARR14(2)     --------->YAB1   atcataaatcagcaaacgcactaaactaattacgcttgaggtcaagaactggcgagcttacaacggattcaagcttgtaagaggaaaataatcactttta  13557000                                                                                --------->At4g35610                                                                                <------NtERF2                                                                                --------->ZAT2                                                                                <-------GAMYB                                                                                --------->ATERF1(1)                                                                               <---------ERF1                                                                               <---------MYB46(3)        ----------->GT1                                                        <---------RAP2.3(1)      <-------MYC3                                                            <---------RAP2.3(3)     <---------O2                                                             <---------DEAR3(1)     --------->TGA1a                                                          <---------RAP2.6(2) <--     --------->O2                                                             <---------RAP2.3(2)<---     <---------TGA1a                                                     <---------WRKY38(1)    <---- --------->ANAC58                                                       --------->WRKY18(1)     <---- --------->ANAC58                                             --------->GLK1(2)------>NtERF2<-------- --DOF2--------->ALFIN1                                       <---------ARR14(2)<---------At4g35610<- ==============bZIP_DOF        --------->YAB1                 --------->ARR14(2)<---------ZAT2 <----- -DAG2------->MYC3      <-------TEIL                      <------ZmHOX2a(1)  --------->RAP2.6(3)<---- ------->ANAC46        --------->CCA1(2)            <---------TOE2(3)  <-----------HVH21  <----------DOF2   cacacccatgtgggaaaatgcagagatacagtatgagaatgcatcaaacaagttaatgaaggagaatttgcagagtcaaggcggctggatagctttgttg  13557100  Previous    Next  AGI:  At2g31865.1    Description:  poly (ADP-ribose) glycohydrolase (PARG) family protein. Identical to Probable poly (PARG2) [Arabidopsis Thaliana] (GB:Q8VYA1;GB:Q3EBQ6); similar to TEJ (SANSKRIT FOR 'BRIGHT') [Arabidopsis thaliana] (TAIR:AT2G31870.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO46377.1); contains InterPro domain Poly glycohydrolase (InterPro:IPR007724) Range:  from: 13553673    to: 13556613    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g31870.1    Description:  TEJ (SANSKRIT FOR 'BRIGHT'); poly(ADP-ribose) glycohydrolase. Identical to Poly (PARG1) [Arabidopsis Thaliana] (GB:Q9SKB3;GB:Q56W82;GB:Q94ET7); similar to poly (ADP-ribose) glycohydrolase (PARG) family protein [Arabidopsis thaliana] (TAIR:AT2G31865.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO46377.1); contains InterPro domain Poly glycohydrolase (InterPro:IPR007724) Range:  from: 13557076    to: 13560920    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version