Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              --------->At4g35610                                         <---------ZAT2       <---------ARR14(2)                --------->ZAT2       --------->ARR14(2)                <---------At4g35610     ------->GAMYB                       --------->At4g35610  ----------->RAV1(1)                   --------->ANAC46 ------->ANAC46                         ----------->RAV1(1) ------->ANAC58                       --------->LBD16 ------->ANAC58              <<<<<<<<<TBF1 ----------->RAV1(1) >MYB46(3)   <---------ARR14(2)    *TSS--------->ANAC46        <-----------GT1       ----------->GT1 -MYB52(2)   --------->ARR14(2) <<<<<<<<<TBF1                ---------->DOF2      <---------MYB52(1)<   ccagcaacagaactgtatttgccactgcttcttcttcttccccagcagcaaaaacaaaacacttaaaaccctatagaaacctctgttttgttatttggga  13546900                                               --------->ARR11(3)                                             ------->TEIL                                       --------->TGA2(2)                                      <-----------HVH21                                      <-----------TGA1                                     --------->ANAC58                                     --------->ANAC46                                     --------->ANAC55(2)                                     --------->ANAC58                                     <---------ANAC55(2)                                     --------->ANAC55(1)                                     --------->O2                                     <---------O2  <-----------RAV1(1)                                     --------->TGA1a                                     --------->bZIP60(2)                                 ---------->ID1 ---------GLK1(2)                    <---------TGA1a     <---------REM1(1)        ---------->ID1   tagaatcgtagactaaaaactatcaaataagaaaatgacacgtcatgaacatattgttgttgtaactcaaaaatgtttttttttgttttttttcgctaat  13547000                  --------->MYB52(1)                  <---------DOF5.7(2)                --------->DOF5.7(2)               <---------DEAR3(2)               <------MYB83               <------MYB46(1)             --------->YAB1              --------->MYB59      <---------ZAT14         <--------P                <---------ZAT18        --------->At5g28300        --------->ZAT14        --------->YAB1       ----------->GT1       --------->YAB1--------->TOE2(3)                          ---------->DOF2     --------->RAP2.6(3)  --------->MYB52(1)     <---------ICU4                      --------->AHL20(2)     --------->SPL7 <------------MYB.PH3(1)--------->TOE1(3)                  ----------->GT1    <------ZmHOX2a(1)------->GAMYB --------->ZAT18  <-----------GT1        <----------DOF2     ------   aacacaggacggtaagtcggtaacggactaatggtagtgaacttatcttaaatattacatttagaatcactgatatacttttgtaaataaaagaaataaa  13547100         --------->MYB59  --------->AHL20(2)     <---------ICU4 ---------->DOF2                 --------->MYB52(1)     ------>ZmHOX2a(1)  ------- ---->DOF2 <------ZmHOX2a(1)    ----------->GT1<-----------GT1     <---------AHL20(2)       ---------   agcctaaaaattaggactgagagaaagaataaataagaaaaaaaactatttacaaaacagaaaacatatataatctcctctctcattcaccctagtcaat  13547200                                                                 <---------LBD16                                                               <---------REM1(2)            <------NtERF2                                                          <---------ANAC46                 --------->LBD16                                                          <------MYB46(1)                 <---------ANAC46                            --------->ANAC58          <---------At4g35610                <---------LBD16                 <---------ANAC58                     --------->At4g35610            --------->CCA1(2)                 <---------ANAC46   <----------DOF2   <---------ZAT2           --------->TOE1(2)                 <---------ANAC58<---------ALFIN1     --------->ZAT2<------NtERF2    <---------At4g35610    <---------YAB1          --------->ANAC58      <-----------HVH21--------->LBD16   --------->At4g35610 -->WOX13(1)     --------------->AGL15  <----------DOF2   <------MYB83        ------>ZmHOX2a(2) --->CBF <-----------GT1 <---------At4g35610<-----------HVH21<---------SPL7 <---------ARR14(2)  -----   ctatttcttattatctgttccttgtggagcaaacaacactttcttttgtcagagtcagctaggtgtacgcggagaatggatcgtgagagatgccggagaa  13547300                                                                                           <---------                                          ----------->HVH21                              --------->At4g35610                                         <-----------HVH21            --------->ANAC58   <---------At4g35610                                    <---------GLK1(1)       --------->LBD16    <----------DOF2                               <------ZmHOX2a(1)           <---------LBD16   <---------At4g35610                            <-----------RAV1(2)         --------->ARR11(3)   --------->At4g35610 ---- ---->GLK1(2)      ---------->DOF2<------ZmHOX2a(1) <------ZmHOX2a(1) --------->ANAC58   --------->LBD16   tatttgatgatgttccaaggagaaagagaagcaggaggaactcagtcacagagaggaagaccctggattgtcaagcttcagctttgtcttccgctgttcc  13547400                                                                                              =======                                                                                              =======                                                                                              ------>ZmHOX2a(1)                                                                                            <--------                                                            <---------DEAR3(1)  ------>ZmHOX2a(2)                           <---------MYB46(3)              --------->SPL7       =====================HOX2a_HOX2a                --------->At4g35610                       <------ZmHOX2a(1)   --------->ARR11(3)                <---------ZAT2                            =============================HOX2a_HOX2a   ------>ZmHOX2a(1)       <-----------RAV1(1)        <---------MYB52(1)      <---------AGP1--------- ----------->RAV1(2)    <----------DOF2              <-----------TGA1         <---------ARR14(2) -DOF2          --------->ZAT2                       <-----------HVH21        <---------ARR11(3) -->ZmHOX2a(1)  <---------At4g35610                 --------->ANAC46          --------->ARR14(2)   <-   tactcctgctccaacttcagctccagcttttgttgcaactagactcaatggtctccgtcaggacgacgctggattgtctggatctagcactggctcctgc  13547500                                                            ----------->RAV1(2)                                                            =====================RAV                                                            <---------ZAT2                                                            --------->ZAT2                                                           ------>NtERF2                                                           --------->LBD16                                                         <---------LBD16                                                         <------NtERF2                                                         --------->ATERF1(1)                                                        <---------ATERF1(1)                                                        ------>NtERF2                                                      --------->ZAT2                                                ----------->HVH21                                               <-----------HVH21                     <------ZmHOX2a(2)         <-----------TGA1                    --------->ARR14(2)        <---------bZIP60(1)                    <---------ARR14(2)        --------->bZIP60(1)    ------>ZmHOX2a(1)                  --------->LBD16             <---------ANAC55(2)    <-----------RAV1(1)                <---------LBD16               <---------ANAC58     ------>ZmHOX2a(2)              <---------ALFIN1      <---------ZAT2   <---------ATERF1(1)                           --      <---------ALFIN1------>ZmHOX2a(2)       --------->ANAC55(2)<---------ARR11(3)                --      <---------ATERF1(1)           --------->ZAT2  --------->DEAR3(1)            <---------At4g35610      ------>NtERF2<---------ARR14(1)         <---------ANAC58   <---------ARR14(2)           -------     --------->DEAR3(1)             --------->At4g35610<---------ARR14(2)         --------->At4g35610 ===========================HOX2a_HOX2a    <---------ARR14(2)    --------->ARR11(3)          ------>NtERF2 ============================HOX2a_HOX2a   --------->ARR14(2)    --------->ARR14(2)          <------- -At4g35610  <---------ZAT2    <---------ARR14(2)  <---------LBD16<------ZmHOX2a(2)   <---------ALFIN1 -->RAV1(2)  --------->ZAT2    --------->ARR14(2)  <---------At4g35610  <---------MYB46(3)  --------- --------ALFIN1--------->MYB52(1)   <---------At4g35610--------->ARR14(2)     <---------REM1(1)  <---   tccagccccgactccagcaccggatccaactcggttccagctccagttccgtcaccggctccggctggatcctgttgttgttgtagctccactgccgact  13547600         --------->ALFIN1     --------->At4g35610     --------->ZAT2                                                            <---------AHL20(2)     <---------At4g35610                                                       --------->AHL20(2)     <---------ZAT2                                                           --------->YAB1   <-----------RAV1(2)                              <-----------HVH21        <---------YAB1 ------->LBD16                                   <---------ANAC58          -------->ATHB1 ---->NtERF2               <---------ARR14(2)    <---------ANAC58          <---------ICU4 -->ATERF1(1)              --------->ARR14(2)  <---------At5g28300         --------->ATHB51 --ATERF1(1)     ------>MYB46(1)      --------->ARR11(3)                   <--------HAHB4 >DEAR3(1) ----------->HVH21          <---------ARR11(3)                  <---------YAB1 ------LBD16     ------>MYB83        <---------CCA1(2)  --------->ICU4    --------->ICU4   ccggctcagctgtgtgaccaatctctgtgtattcggactatatctctattaccgtgtcatgagtttgcaacttagaattattaaaatcaaatttgagttt  13547700                                                                               --------->ARR11(3)                                                                               <---------ARR11(3)                                                                              <---------CCA1(1)                                                                              --------->GLK1(1)                                                                     <----------DOF2                                                                <---------AHL20(2) ---------->DOF2                                                               --------->AHL20(2)>>>>>>>>>RAP2.2                                                            <---------YAB1  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                           --------->AHL20(2) <---------GLK1(1)                 ----------->GT1                           <---------AHL20(1) <---------RVE1(1)                 <------MYB83                   --------->AHL20(2)--------->ARR11(3)                 <------MYB46(1)--------->CCA1(2)          --------->AHL20(1)<---------ARR11(3)             --------->ZAT2    --------->ARR11(3)          <---------AHL20(2)--------->ARR11(3)  <---             <---------ZAT2    <---------ARR11(3)      <------ZmHOX2a(1)  <------ZmHOX2a(1)  <<<<<<<< --------->ARR11(3)    --------->ARR11(3)       <---------AHL20(2)<---------ARR11(3)   <------ZmHOX2a(1)   tagggtcttggactaagcttggtaataacttgagatataagtgatttagtttaaataggattatattaaatctttaggagatatctaaaggataagttag  13547800  Previous    Next  AGI:  At2g31840.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G28590.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75809.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336) Range:  from: 13544989    to: 13546835    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g31850.1    Description:  unknown protein Range:  from: 13547276    to: 13547617    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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