Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <---------ALFIN1                                <---------ATERF1(1)                               --------->DEAR3(1)                               --------->DREB2C(2)                               --------->ATERF1(2)                               ------->PIF5                              --------->DEAR3(2)                             --------->MYB52(1)                             ------->TEIL                            <---------ALFIN1                           <---------ABI4(2)                           --------->MYB46(3)                      ------>NtERF2                     <---------DEAR3(1)                     --------->ANAC46                   --------->DEAR3(1)                      ----------->RAV1(2)                 <---------At5g28300                     --------->AtMYB61             --------->ARR14(2)<---------ATERF1(2)       <---------ALFIN1             <---------ARR14(2)<-------PIF5             --------->bZIP60(2) --------->HSFB2a(2)          --------->LBD16 --------->ANAC58             ------>NtERF2        <---------HSFB2a(2)         <---------LBD16  --------->ANAC58             <---------ATERF1(1)  <---------HSFC1(1)        <---------LBD16 <---------ALFIN1              <---------ALFIN1     <---------LBD16        --------->SPL7<-----------HVH21       <-----------HVH21         <---------GLK1(1)      <---------SPL7<---------LBD16          --------->ANAC58  --------->ANAC46      <---------RAP2.6(3) --------->ANAC46   --------->ANAC58<---------ATERF1(1)      <-----------HVH21<------NtERF2         --------->ANAC46------>ZmHOX2a(1)                      -    --------->ATERF1(1)<---------SPL7        <---------ANAC55(2)------>NtERF2                     --- <---------RAP2.6(2)--------->LBD16------>NtERF2   --------->ANAC46  <---------ATHB12      <---------ARR11(3)   atggaggccgtccgggattcaccgcggcacgcaccggcaccttgaatacgtcaaggccacctcctgcgccaatgaattctggaagggactcgatatcatc  13544400                     ------>NtERF2                    --------->DREB2C(2)                    ------->GAMYB                    --------->DEAR3(1)          <---------MYB52(1)          <------NtERF2         ------>NtERF2         <-----------HVH21         <---------RAP2.6(3)        --------->DREB2C(2)        --------->RAP2.6(2)        --------->RAP2.3(3)        --------->RAP2.3(2)        --------->DEAR3(1)        --------->RRTF1(3)        --------->RRTF1(2)       --------->RAP2.3(1)       --------->ERF1--------->ABI4(1)       --------->ATERF1(1)       <------NtERF2<---------ALFIN1       --------->RRTF1(1)      <---------ATERF1(1)      ------>NtERF2--------->ANAC46     <---------ATERF1(2)     --------->RAP2.3(2)     --------->RAP2.6(2)     --------->DEAR3(1)                           ----------->HVH21     --------->ATERF1(2)                        ----------->GT1                 <----------DOF2    --------->DEAR3(2)                          <---------O2              --------->WRKY38(1)    --------->RAP2.3(1)                         <---------ANAC58         <---------MYB52(1)   --------->ZAT2  --------->ORA47(2)           --------->O2            <-----------HVH21   ------>NtERF2   --------->MYB46(3)           <---------ANAC58        <-------GAMYB <---------ALFIN1   <---------ATERF1(1)     ----------->HVH21    <---------ANAC46       --------->ANAC46     --------- ---------->RAV1(2)--------->DEAR3(2)          <-----------------------TaNAC69(2)    --------->MYB46(3) --->ZmHOX2a(1)  <---------ALFIN1              <------NtERF2       ------>ZmHOX2a(1)>>>>>>>>>>>>>>>>>LFY   ctccctgccgccgtcatttccaccgccctgtgatgctggtttcgatggaggcgtgacaaaaccacattcctccccgttgcctctttcaccactggttctt  13544500                                                                                <------ZmHOX2a(2)                                                                               --------->AGP1                                                                               --------->ARR14(2)                                                                               ------->TEIL                                                                               <---------ARR14(2)                                                                               <---------AGP1                                                                               --------->ARR11(3)                                                                            <---------ANAC55(2)                                                                            --------->ANAC55(2)                                                                            --------->ANAC55(1)                                                                            --------->ANAC58                                                                           <---------LBD16                                                                         ----------->HVH21                                                                        <-----------HVH21                                                                       <---------bZIP60(1)                                                                 <---------ARR14(2)     --------->RAP2.3(3)                                                   --------->AHL20(2)  --------->bZIP60(1)                                              --------->YAB1     --------->ARR14(2)   <---------ZAT18                                          <------ZmHOX2a(1)      --------->GLK1(2)    --------->ZAT18                                       --------->At4g35610      <---------GLK1(2)------>ZmHOX2a(2) >ARR14(2)       ------>ZmHOX2a(1) <-----------HVH21     --------->At4g35610--------->ANAC58   ccatcgacgatggctactccttcggtagagaactcaccatcagaggaatcaaaataaacagcttcagaatccgatgtcacggatctagagccctcatcaa  13544600                      <---------RAP2.6(2)                    --------->ALFIN1                  <------MYB83                  <------MYB46(1)                 <---------DEAR3(1)                 <---------------AtSPL3                        <---------LBD16                 <---------AtMYB61                             --------->LBD16           <---------ARR14(2)                                 <---------ANAC46                      -           --------->ARR14(2)                                <---------LBD16                        -         --------->LBD16                                   ----------->HVH21                        <        <---------ANAC58                                   <---------SPL7                --------->ANAC58        <---------ANAC46                          <------ZmHOX2a(1)  <------ZmHOX2a(1)   --------->ANAC58        <---------ANAC58                <---------ANAC58  <---------ANAC58      --------->ZAT2      -       <---------LBD16<---------DEAR3(1)<---------ANAC58  <---------ANAC58 <------ZmHOX2a(1)   ------   ggctatatttgcggattggatggtgcggcttctgttcgcattgctcgacataggaatgtgtcttacggggaggaagaggatgagcagggacaagcgatgc  13544700                                 <---------ARR11(1)                                 --------->GLK1(2)                                 <---------ARR14(2)                              <---------MYB59                            --------->MYB52(1)                           <-----------GT1                        <------------ATHB5                        <--------ATHB1                        <---------------AGL15                        <---------ICU4                        --------------->AGL15             ----------->RAV1(2) --------->ARR14(2)          ----------------->AGL2               ---             <---------At4g35610<---------ARR14(1)           ----------------->AGL3               ---    <---------ATERF1(1) --------->ATHB51                     ========================================    ------>NtERF2       <--------HAHB4                       ----------------->AG                <---   --------->DEAR3(1)   --------->YAB1                       ----------------->AGL1             ----- -------->ANAC58       --------->AHL20(2)          ---------->DOF2                              ----- -------->ANAC58       <---------ATHB51         <------ZmHOX2a(2)               <---------GLK1(1)---- ---------ALFIN1       --------->ICU4 --------->AtLEC2  --------->GLK1(2) >>>>>>>>>SARD1        ----- -------->ANAC46       <---------ATHB12        --------->ARR11(3)         >>>>>>>>>CBP60g     ------- >NtERF2<---------At4g35610<<<<<<<<<GT-2       <---------ARR11(3) <---------ATHB12           --------   caacgcctcccgctcatctggttcaataattaccgaatccatggaagaagatcaaaagaatttgccaaatgaagaaatttggaaatcggaacaaaaccaa  13544800 ------>YAB1 ------------>AGL15 =============MADS_MADS ------ATHB12               <---------MYB46(3) ->MYB83                   --------->ALFIN1 --->P                  --------->ALFIN1 ----->MYB46(3)   *TSS  <---------AtMYB61                              <-------MYC2 ->MYB46(1)    <------ZmHOX2a(1)                                       ------->MYC2 -->AtMYB61  <---------TOE2(3)   <------------CBF                      ------->MYC3 ->MYB46(3)--------->ICU4  <---------ANAC46          ---------->DOF2   <-------MYC3   ccatgaaggggaaatgaggatgagagatggtgggagattgagagagagcgagagagaaagggagaagagagcacgttgcaagagagagaaacatggtgat  13544900                                                      <---------------AGL15                                                      --------------->AGL15                                                      <---------HSFB2a(2)                                                      --------->HSFB2a(2)                                                     ----------------->AGL2                 --------->HSFC1(2)                  <-----------------AGL3                 <---------HSFC1(2)        <---------AHL20(2)                 --------->HSFB2a(1)   <---------AHL20(2)           --------->ANAC58           --------->AHL20(2)--------->AHL20(2)           --------->ANAC58        --------->YAB1    ----------------->AGL3                       <--        <---------SPL7    <---------At4g35610  --------->YAB1                              --------->YAB1      <---------LBD16  <---------At4g35610 --------->AHL20(2)                        <-----------GT1-   caagtgtttacggacgcgaagcctctgcttctgagactcataaaatttatcatgttctataaatagcaatttcgaaaaacatatatttcacattcaaaag  13545000                                                                         <---------YAB1                                                                     <---------ANAC58                                                            <------ZmHOX2a(2)                                                           --------->ARR11(3)             <---------At4g35610                           <---------ARR11(3) -------WOX13(1)                                 <---------DAG2      <---------ANAC58             --- -------->ATHB12 <XXXXXXXXXXXXXXXXXXXXMIR825     <----------DOF2---------->DOF2                   ---   attgattacttcttcagttcatacattttcttcagactagagaagaaactactttacataagatcacaaaggcttatgcttaattcacacttacatcgac  13545100                       --------->ANAC58                       --------->ANAC46                                      <---------YAB1   <------           <---------ANAC58    --------->AtLEC2     --------->ZAT2   --------->ANAC58      <---------At4g35610           <---------ANAC58------>NtERF2            <---------ZAT2   --------->ANAC58 <---------At4g35610    --------->GLK1(2)  --------->ANAC58             <---------At4g35610     <---------ARR11(3)-------   <---------GLK1(2) <-----------GT1                --------->At4g35610   --------->ICU4   ---------- ------->DOF2     <---------ARR14(2)       <---------MYB46(3)      ---------->DOF2 ---------->DOF2 ------>MYB52(1)  --------->ARR14(2)      --------->ALFIN1 --------->YAB1 <---------YAB1   --------->At4g35610   taaaggaatctgttcttgcgaattcacgacaccattcaaacaaggtggttttgcagctccataatagaagaaagccatgatttttgaaagctcatctgct  13545200                                                          <-----------RAV1(2)                                              <---------TOE2(3)                                            ---------->DOF2                         ------>ZmHOX2a(1)                                           --------->MYB46(3)                       <---------HSFB2a(2)                                           <---------MYB52(2)      --------->MYB52(1)                                         ----------->RAV1(1)      <---------ZAT14   --------->HSFB2a(2)                                <---------------AtSPL8   <-------TEIL          --------->GLK1(1) ---At4g35610        <---------AHL20(2)  =============================RAV   <---------TOE2(3) -->At4g35610     ----------->GT1   <-------TEIL        --------->GLK1(2)   <---------TOE1(3)<------- ->RAV1(2)       ----------->GT1<---------------AtSPL3  --------->CCA1(2)  <-----------RAV1(2)  <----   gttctaatgcctgaaaaataagttaaattgattttaagtacagcaacaaaggttagagattcaggtactgaacggtttcaggtttcctcgaacaatacct  13545300  Previous    Next  AGI:  At2g31830.1    Description:  endonuclease/exonuclease/phosphatase family protein. similar to endonuclease/exonuclease/phosphatase family protein [Arabidopsis thaliana] (TAIR:AT2G43900.1); similar to 5PTASE13/AT5PTASE13, inositol or phosphatidylinositol phosphatase [Arabidopsis thaliana] (TAIR:AT1G05630.1); similar to 5PTASE13/AT5PTASE13, inositol or phosphatidylinositol phosphatase [Arabidopsis thaliana] (TAIR:AT1G05630.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN68138.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15614.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46359.1); contains InterPro domain Inositol polyphosphate Range:  from: 13539853    to: 13544818    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g31840.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G28590.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75809.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336) Range:  from: 13544989    to: 13546835    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version