Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <<<<<<<<<TBF1                                                                <---------GLK1(2)                                                               --------->HSFC1(2)                                                               <---------HSFC1(2)   ----------->HVH21                                           <---------At4g35610 -------->MYB52(1)                                             --------->HSFB2a(1) ----->MYB83                                                   --------->ZAT2 ----->MYB46(1)               <---------At4g35610              <---------ZAT2 -------MYB59                 --------->At4g35610              --------->At4g35610 ----->ANAC58              <<<<<<<<<TBF1                      <---------TOE1(2)            ---------- ----->ANAC58           <<<<<<<<<TBF1                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ----->ANAC46<---------At4g35610----------->HVH21      <----------DOF2     <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   cccaactgatggtgatgctgatgttcttcttcttctgacattctctctctcttctctcttttcgcagcttcttcttcatcttcggcttaacaacaacaaa  13537000                   <---------At4g35610                   --------->At4g35610                   <---------ZAT14         --------->ALFIN1        <-------MYC4        ------->MYC4        ------->MYC3        <-------MYC3        ------->MYC2        ------->PIF5        <-------MYC2        <-------PIF5 <---------ZAT18       --------->ANAC46  ---------->DOF2       <---------TGA1a--------->ANAC58       --------->TGA1a--------->ANAC58       --------->O2--------->ZAT18       --------->ANAC55(2)       =============================bZIP_DOF                                                xxxxxxxxx       =============================bZIP_DOF                                     <----------DOF2       <---------O2<---------ZAT18                                    <---------AtMYB61     <------MYB46(1)      ------------>OsbHLH66                                        <----------DOF2          <------MYB83     <---------ALFIN1--------->ZAT18 <----------DOF2            <---------ARR11(3)      <-----------RAV1(1) ->RAV1(1)         --------->ZAT14   <---------DAG2      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)     xxx   acttcacacacgtggtgagagagcacacaaaggctcaagctttttcaaacccttgttgaaattcgagctcttttggtgtttctcttttttttgttggtat  13537100                                       <---------GLK1(2)                                      <---------At4g35610                         <---------------AtSPL3           --------->YAB1                         <---------TOE2(3)              --------->ARR14(2)                         --------------->AtSPL3         <---------ARR14(2)   <------MYB46(1)       <---------------AtSPL8<<<<<<<<<TBF1   <------MYB83          <---------TOE1(3)  <<<<<<<<<TBF1 ------>ZmHOX2a(2)         --------->ZAT2 xxxxxxxxxxx>smallRNA(le3)            --------->At4g35610<------ZmHOX2a(2)          <---------ZAT2 xxxxxxxxxxxxx>smallRNA(le3)         XXXXXXXXXXXXXXXXXXXX>MIR837-5P            <---------REM1(2) ----   caatttggtgtttctcttggtcttgttgaggtactgaatcagcttcttcttcttctccgatcttaatcgattctaagtttcttcacagcttgggacgatt  13537200                           --------->DAG2                         <---------MYB52(1)                                     --------->ICU4                        --------->LBD16             <---------ANAC58     <---------HSFB2a(2)                       --------->LBD16              <---------ANAC58<---------HSFB2a(1)                       --------->ANAC46             <---------ANAC46<---------HSFC1(2)           <---          ------------>CBF---------->DOF2      <-----------RAV1(1)<---------GLK1(2)      ---------->DOF2 ------->HVH21        <---------LBD16   <-----------GT1------------>CBF  --------->HSFB2a(2)   <-----   tgacatctactctccaattcatttcccgtaaagttgtttttttttcttcttgttgcttgcaatacatggattcttcgaggtgataatcaacaaaagctta  13537300                                                             <---------AHL20(2)                                                             --------->ARR11(3)                                                             --------->AHL20(1)  --------->ANAC55(2)                                                             <---------AHL20(1) --------->MYB59 <----------DOF2                                 --------->CCA1(2)              <---------TOE1(3) ------CCA1(2)                                <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<---------TOE2(3) ----CCA1(2)                        <---------ZAT6  <---------LBD16   --------->GLK1(2)   tctcttttgttttctcaaggtttgtgtattagagattagtgtttttgttagatttggggataatatatagataatctgggtttaggtattttagttgata  13537400                                                                        --------->MYB52(1)                                                                        ----------->RAV1(1)   -------                      --------->CCA1(2)                     --------->ALFIN1                 <-------                     <---------ARR14(2)                   <-----------RAV1(1)                --------                     --------->ARR14(2)    --------->At4g35610  <----------ARF1 <----------DOF2   <--                    <------ZmHOX2a(1) <------ZmHOX2a(1)   ------>ZmHOX2a(1)------->GAMYB   --------->YAB1       <------------CBF        --------->YAB1        ------->GAMYB   --------->ANAC58     <---------YAB1     --------->AHL20(2)       <---------YAB1      ----------->RAV1(1)--------->ANAC58 ----------->GT1   acgacgataaattggagtaataggatatgactataatggaggagaagcagaacaacagtcctgtgggagagaagcaacagagctttaatggtataataat  13537500                                                           --------->ALFIN1                                                           <---------ANAC46                                                        --------->ALFIN1                                                      <-----------RAV1(1)   ------>MYB46(1)                                 <---------MYB52(1)   ------>MYB83                               --------->ARR14(2)    --------->MYB52(1) -->YAB1                                      <---------ARR14(2) --------->GLK1(2)     <----------DOF2 --YAB1                                  ------->GAMYB--------->ALFIN1 ------->GAMYB<---------ARR11(3) ->ICU4                               ----------->RAV1(1)<---------ANAC46    --------->DAG2 ---------GT1 --------->GLK1(2)       --------->MYB52(1)<---------AtMYB61  ---------->DOF2   aaaccaaacacaagagaatcagacaaaatcaatggagaaacaacagagtttccgatgtgtggtggagaatcaaccgagaaaggcgagagctttagagaaa  13537600                                                                      ------->GAMYB                                                     <---------ARR11(3)                                               --------->ANAC58    --------->MYB52(1)              --                                              <---------LBD16      ----------->RAV1(1)           ----                                            <---------ARR14(2)  --------->ANAC58        <---------TOE2(3)                                     ---------->DOF2 --------->ARR11(3)                <---------DOF5.7(2)                                   --------->At4g35610<------ZmHOX2a(2)               <---------WRKY12              --------->ALFIN1   --------->YAB1--------->ANAC58 --------->ANAC58    <-----------HVH21   caagtgagtttccaaggtgtgaatgtagagaactatcagcaaagcagactcggaagatcaatggagaagcaacagagttttcgaggtgtcaacgttgaga  13537700                                                                           <------MYB83                                                                           <------MYB46(1)                                                                          <---------MYB46(3)                                                                         <---------ANAC46                                                                       <---------MYB46(3)                                                                      --------->ALFIN1                                                                     --------->LBD16                                  <---------AtMYB61                 <---------ANAC58                         -------->P                                 <---------ANAC58                      --------->HSFC1(2)                            <---------ANAC46       --------->ALFIN1  --------->MYB52(1)                      --------->ARR14(2)             -----      ------->MYC3    --------->At4g35610                        --------->GLK1(2)             ------      <-------MYC3    <---------HSFC1(2)                  --------->At4g35610                  <----- ------->YAB1        --------->ANAC58                     <---------At4g35610              --------->At4g35610 ----->GLK1(2)       --------->ANAC58      ----------->RAV1(1)   <---------ARR14(2)     --------->At4g35610   atcataaacgtggagttatggagaagctaccgagttttggtagagcaacaatggagaggcagaagagtttccgtggtgggtttttggagaagcagaagag  13537800      <---------ANAC46     --------->ALFIN1     <---------AtMYB61    --------->REM1(2)   <---------MYB52(1)   --------->ALFIN1  --------->LBD16 <---------ANAC58 <---------ANAC55(1) <---------ANAC46                                                                                  <- <---------ANAC58                                        ------->TEIL         <-----------ARR10    -- ---->At4g35610                                  >>>>>>>>>TBF1            <------ZmHOX2a(1)       <-- --->ARR11(3)    --------->ANAC58            <------ZmHOX2a(1)      ---------->DOF2              ---- ----ARR11(3)    --------->ANAC58         <------ZmHOX2a(1)     --------->LBD16           <---------CCA1(2)   cttccgtgtggtgatggagaggcaattgagttttataggtgagaggaggaagaagaatgaatcaccagggaaaagaggagactcttctcttcatatcgct  13537900  Previous    Next  AGI:  At2g31820.1    Description:  ankyrin repeat family protein. similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT1G05640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46358.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN68139.1); contains InterPro domain Ankyrin (InterPro:IPR002110) Range:  from: 13537427    to: 13539639    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version