Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <---------ANAC58                                          <---------ANAC58             <---------AHL20(2)                                <-------TEIL                          --------->AHL20(2)    ---------                              <---------ARR11(3)                      <---------AHL20(2)    ---------                              --------->ARR11(3)                     --------->YAB1        <---------AHL20(2)                              <---------ARR14(2)                  <---------AHL20(2)       <---------YAB1                              --------->ARR14(2)              <---------ICU4             <---------RVE1(1)                ----------->GT1 ------>ZmHOX2a(2)            <---------ATHB51            <---------CCA1(1)              ------>ZmHOX2a(2)<------ZmHOX2a(2)       --------->HSFB2a(2)              <---------ARR11(3)            --------->ARR11(3)--------->AGP1     <---------ANAC58--------->AHL20(2)     <---------ARR14(2)        <------------CBF     <---------GLK1(1)   <---------ANAC58<---------AHL20(1)     --------->ARR11(3)  --------->HSFB2a(2)        --------->GLK1(1)   <---------ANAC46<---------AHL20(2)   ----------->ARR10  <---------HSFB2a(2)   <---------ANAC55(2)--------->ZAT18   --------->ICU4   <---------LBD16       - ---------HSFB2a(2)  --------->ICU4       <---------ANAC46   --------->AHL20(2) <---------MYB46(3)  < -------->HSFB2a(2) ----------------------->TaNAC69(2) <---------HSFB2a(2)  ----------->HVH21      -- ----DOF2   <---------AGP1  ----------->ARR10<-------GAMYB   <---------AHL20(2)<---------ANAC46    <-   ttctcgagaaaattgatctggtgattatgtgagatccgtctctagcgcgttgcttatcgagaaataattaattttaatttgacgggtgaagatattattg  13530900                                              --------->ATHB51 --------->TGA1a                              --------->ATHB12 --------->O2                                 <---------ICU4 <---------O2                              <---------ICU4 <---------TGA1a                           -------->ATHB1 =============================bZIP_DOF     --------->YAB1 ========================================bZIP_DOF    <---------ANAC58                       <-------- <---------ANAC46                          <--------HAHB4                                   <-------- ==============================================bZIP_DOF                                 --------->ZAT18 >ATHB51                      <---------DAG2 --------->ICU4        --------->ICU4       <---------ZAT18 >ATHB12   <---------YAB1     <----------DOF2<---------YAB1   ----------->GT1       <---------WOX13(1) -------->ATERF1(1)        <-----------GT1--------->ICU4     --------->LBD16       <---------ANAC58 ------NtERF2         --------->ATHB12    <---------ATHB12  <---------ANAC46       <---------ANAC58 ---->NtERF2  <---------WOX13(1)        --------->WOX13(1) <---------LBD16        --------->ATHB12 --------ATERF1(1) <----------DOF2  <----------DOF2  <---------ANAC58            <---------YAB1     <   gcgacgtctgtttccgattgactttgatttgacttttcctttcaatcattatttggcgagtcccgcgtaaatatggactcttcttgattgtccacttttt  13531000                                                                                                  <--             --------->ARR14(2)                                                                   <--             <---------ARR14(2)                                                               -------           --------->LBD16                                        <---------ICU4              <------         <---------LBD16                         <-----------GT1  <--------HAHB4              <------     <----------DOF2                      <---------YAB1          --------->ATHB51            <------    <---------ANAC58               ------>ZmHOX2a(1)--------->TOE1(3)  <---------YAB1         -------    <---------ANAC58               <---------------AGL15         --------->ICU4          --------->TOE1(2)   <------NtERF2                  --------->TOE2(3) --------->TOE2(3)<-----------GT1    --------->ANAC58  ------>NtERF2 <---------AHL20(2)--------------->AGL15          <---------YAB1         --------->ANAC58 -DAG2 <-----------GT1            =================================================================== --DOF2<---------WRKY18(1)   <----------DOF2 ------->TEIL      --------->YAB1          ------->TEIL ---------MYB52(1)    <---------ICU4   --------->ICU4--------->ANAC46--------->YAB1 <---------MYB52(2)   tcggtggctttaccggatttaaaatcattttcttttcctaaattatgaattttaccctaaacttctcataattacaattagttccgacgaacccaagata  13531100                                                           <--------P                                                       <---------ANAC55(2)                                                       <---------ANAC58                                                       --------->ANAC55(2)                                                       <---------ANAC55(1)                                                       --------->O2                                                       <---------O2                                                       --------->TGA1a                                                       <---------ANAC58                                                       =====================================bZIP_DOF                                                       =============MYC_MYB                                                       <---------bZIP60(2)                                                       <---------TGA1a                                                       =====================================bZIP_DOF                                                     <---------TGA2(2)                                                  <---------ZAT2                                                  <---------At4g35610                                                  --------->At4g35610      <---------------AGL15                 <---------ANAC58 <------MYB83     --------------->AGL15            <-------GAMYB ----------->TGA1     <-----------------AG            <---------MYB46(3)<---------ANAC46 -------DAG2                         ----------->GT1----------->HVH21 --------DOF2          <---------ZAT18===========================MYC_MYB -->ARR14(2)           --------->WRKY38(1)  <---------ANAC58 <------MYB46(1) ---GLK1(2)            --------->WRKY12     <---------ANAC46<---------AtMYB61            <----------DOF2 ---ARR14(2)  <------ZmHOX2a(1)      --------->MYB111(2) --------->ALFIN1        <----------DOF2 ---ARR11(3) ----------->GT1     --------->DAG2   --------->ZAT2                <---------DAG2 -->ARR11(3)--------->MYB59    ==================================bZIP_DOF<---------HSFB2a(2)    ----- ====================MADS_MADS ---------->DOF2--------->ALFIN1           --------->HSFB2a(2) --------   ctttttagcaaaattaggaaaatagttgactcgaaaaggttgttatacgtggagctgacgtgttggtcttatctactcgaagccttttgggcttttctta  13531200                                       --------->MYB52(1)                                      ----------->HVH21                                   --------->SPL7                             --------->MYB52(1)                                                     <                             --------->ARR14(2)                                                    <-                             ------>MYB46(1)                                                       <-                             ------>MYB83                    ------>MYB83                         *TSS                             <---------ARR14(2)              ------>MYB46(1)                      ---                           ------->GAMYB--------->SPL7     ------->GAMYB                         <---                           <---------MYB59     <-----------GT1                              <--------                         --------->MYB52(1)    <---------WRKY18(1)                          <--------                        ------->GAMYB <---------SPL7      --------->MYB46(3)             <---------MYB52(1)                       <---------MYB55(2)     --------->WRKY38(1)          <----------DOF2  <--------     --------->ATHB12  --------->MYB46(3)     --------->WRKY12       <-------TEIL       <---------RAP2.6(3)  <------------CBF     <---------MYB111(2)    ----------->HVH21     <-----------GT1    <---------ANAC58 ----->DOF2            <---------MYB52(2) <---------DEAR3(2)----------->RAV1(1)        <---------ANAC58 ->TOE2(3)   <---------TOE2(3)   ----------->HVH21        <---------MYB55(2)    <-----------GT1<-----   aagccattgatttctaaggtcgtcaacaaccgaaccggaccggacggtttgaccggtctaaccaacatatatacgttctttttcacttgccgtttcgtcg  13531300                                                  ------>NtERF2                                                  <------NtERF2                                                 --------->RAP2.6(2)                                                 ------>NtERF2                                    <--                                                <---------ANAC46                                  ---                                                <---------RAP2.6(2)                               <-- ---------MYB52(1)                              <---------ANAC58--------->ARR11(3)           ======== ----------HVH21                                <---------ATERF1(2)                          ------>ZmHOX2a(2) ----------TGA1                                 <---------DEAR3(1)                          ========= ------>ETT(2)                                  --------->ATERF1(2)                         <------ZmHOX2a(2) ---NtERF2                                      <---------ANAC58<---------ARR11(3)         --------->ARR14(2) -ANAC58                                  <---------WRKY12  <---------MYB52(1)             <---------ARR14(2) -ANAC46                                  <<<<<<<<<WRKY18 --------->HSFB2a(2)        <---------ANAC46 -ANAC58                                <-----------HVH21 <---------HSFB2a(2)        <---------ANAC58 ----DEAR3(1)           <---------HSFB2a(1)    --------->RAP2.6(3)   <-----------GT1 <---------ANAC58   tcgtcagtcttcttcagtagcaaaaaaccttcggcttcgtctcgtcaatggcggccatttctgtaagttcttcaccatctattcgctgcttgagatcggc  13531400                                                 <------NtERF2                                                ------>NtERF2              <---------ARR11(3)                                         <---------ANAC58                  <---------ARR14(2)                                      <---------CCA1(2)                    <-----------ARR10               ------>ZmHOX2a(1)     --------->REM1(2)                 <---------MYB52(1)             ----------->RAV1(2)  <---------ANAC46     <---------ARR11(3)  --------->ARR11(3)      <-----------ARR10           <---------ANAC58     --------->ARR11(3)  --------->ARR14(2)      --------->ARR14(2)     ----------->HVH21  --------->LBD16       --------->LBD16     <---------GLK1(2)      ------>ZmHOX2a(1)  --------->LBD16--------->ARR11(3) -------HSFB2a(1)       --------->ARR14(2)     <---------LBD16<-----------ARR10           <---------ANAC46 ------>HSFB2a(1)       <---------ARR14(2)    <---------HSFB2a(2)   <---------LBD16      <------NtERF2 --------TaMYB80       <---------CCA1(2) <---------ANAC58     <---------ARR11(3)       --------->ALFIN1 =====================HOX2a_HOX2a <---------ANAC58    --------->HSFB2a(1) <---------CCA1(2) =====================HOX2a_HOX2a------>NtERF2<---------LBD16<---------CCA1(2)       --------->DEAR3(1)   atgttccgattcttctcctgctcttgtatcctcgacgcgtgtatcgttcccggcgaagatttcatatctctccggtatatcttcgcaccgtggcgatgaa  13531500                                                    <---------ANAC58                                                    <---------ANAC58                                            ------>ZmHOX2a(2)                                           <------ZmHOX2a(2)                                           <---------GLK1(1)                                           --------->GLK1(1)                                          <---------AGP1<----------DOF2                            <---------HSFC1(2)      <---------ANAC46                            <---------HSFB2a(1)    <XXXXXXXXXXXXXXXXXXXXMIR861-5P                            --------->HSFC1(2) ----------->HVH21             <---------ATERF1(1)                      <---------MYB52(1)  <---------ARR11(3)            <---------At4g35610                     --------->TOE2(3)    --------->ARR14(3)            ----------->RAV1(2)                   <-------TEIL           <---------ARR14(3)            --------->At4g35610                 <---------ARR14(2)       --------->ARR14(2)          --------->REM1(1)                 <---------GLK1(2)        <---------ARR14(2)         <-------TEIL                 --------->ARR14(2)       --------->ARR11(3)      --------->HSFC1(2)                <------ZmHOX2a(1)       ----------->ARR10         <---------HSFC1(2)                ==================================HOX2a_HOX2a  --------->LBD16                  -----                ===================================HOX2a_HOX2a--------->ANAC46                  <----   atgggtaagagaatggaaggattcgttagaagcgtcgatgggaagatctctgatgcgtctttctccgaagcttcatctgcgactccaaaatcgaagtact  13531600                                               <---------GLK1(2)                                            <---------WOX13(1)                   --------->ANAC58              ---------->DOF2             --------->ATHB12                       --------->ANAC46            <----------DOF2            <----------DOF2       --------->AHL20(2)  --------->ANAC58      <---------ICU4                  <---------ANAC58       <---------AHL20(2) --------->ZAT18   --------->YAB1                     <---------ANAC58  <---------ZAT18       <---------At4g35610   --------->AHL20(2)     <----------DOF2<---------YAB1 --------->ZAT18       --------->At4g35610 ------>GT1<---------ANAC58       <----------DOF2  <----------DOF2         <------ZmHOX2a(1)    <---- -----ZAT6 <---------ANAC58     <------------------------ANAC81        --------->ALFIN1         <----   gtgaataatatttgcttaaagtcgtttccttttggcctttgctttgattgattctttgtgcattaaaatcagggtgaggaagcacacaatttcagtattt  13531700                   <---------YAB1                   <---------WOX13(1)                 --------->ATHB12                 --------->YAB1                                                    <---------ZAT14                 ----------->GT1                                              <------MYB46(1)          --------->At4g35610        <---------ZAT6   --------->CCA1(2)       <------MYB83       ---------->DOF2               --------->ALFIN1--------->ARR14(2)      <---------AtMYB61     --------->ANAC58     <------ZmHOX2a(1)          <---------ARR14(2)     <---------MYB52(1)     --------->ANAC58    <---------YAB1    <---------AtLEC2                <-------GAMYB -----MYB46(3)  <---------YAB1    <------ZmHOX2a(1) <------ZmHOX2a(1)     <-----------RAV1(1) ------- -------RAV1(1) --------->ICU4 <-----------RAV1(2) ----------->GT1        <---------MYB46(3)  -------   gttggagacgaaagcggaatgattaataggattgcaggagtgtttgcaaggagaggatacaatattgagagtcttgctgttggtctgaacagagacaagg  13531800  Previous    Next  AGI:  At2g31810.1    Description:  acetolactate synthase small subunit, putative. similar to acetolactate synthase small subunit, putative [Arabidopsis thaliana] (TAIR:AT5G16290.2); similar to acetolactate synthase small subunit, putative [Arabidopsis thaliana] (TAIR:AT5G16290.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN61470.1); contains InterPro domain Amino acid-binding ACT; (InterPro:IPR002912); contains InterPro domain Acetolactate synthase, small subunit; (InterPro:IPR004789) Range:  from: 13531298    to: 13535634    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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