Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          ---------->ID1                                                  <---------AHL20(2)      ----------->GT1                            --------->AHL20(1)      ------->GAMYB         ------->GAMYB        <---------AHL20(1) ------ARR11(3)            <---------MYB52(2)  <---------AHL20(2) ----->ARR11(3)            --------->MYB46(3) --------->AHL20(2)                                    < -->AHL20(2)          --------->ANAC46       <---------YAB1                                         - ---AHL20(2)  --------->AHL20(2)            --------->AHL20(2)                                   ----   atcttcaaccgaaaaaaaaaattccctcaacaaactttagaaccaatattatatatttggcctaaaatccaagagaaaactgagaaacaaaatttgatga  13521900                                                    --------->TCP23                                                   ------>NtERF2                                                   --------->PCF2                ----------->GT1                   --------->TCP20           --------->LBD16                        --------->TCP15(1)          --------->ANAC46                        <---------PCF2             --------->ICU4          --------->ANAC58                       <---------TCP15(2)         <------------CBF          --------->ANAC58                       <---------TCP23        --------->ANAC55(2)    ------        --------->ANAC46                       --------->ALFIN1  --------->AHL20(2)  --------->ANAC46    <-----------GT1                    --------->AHL20(2)        <---------AHL20(2)  --------->ANAC55(2) ---------AHL20(2)           <---------YAB1    <-----------RAV1(1)      --------->YAB1    --------->ZAT6 -------->AHL20(2)         --------->CCA1(2)  ------->MYC3     --------->TOE2(3)   <---------YAB1 --->TEIL --------->LBD16 --------->ARR11(1)  <-------MYC3     <----------DOF2  <---------YAB1 ------   atttttttacacccgaaaatgtgaaatagatatgatacaaataaaacatgtggggcccagagaaactttaattttcgtaattgttatacttaacactagc  13522000                               ------->MYC2                               <-------PIF5                               ------->PIF5            --------->ALFIN1   <-------MYC4                                                         -           <---------MYB52(1)  ------->MYC4                                                     <----        <---------LBD16        <-------MYC2                                                     <----     --------->KAN4(2)         <-------MYC3                                                     -----    --------->HSFB2a(1)        ------->MYC3                                                     -----    <---------HSFC1(2)        <---------ANAC55(2)                                              <-----    --------->HSFC1(2)        <---------TGA1a          --------->ICU4                          ------    <---------HSFB2a(1)       <---------O2           --------->YAB1                           -------    --------->KAN4(1)         --------->TGA1a       <---------YAB1                            -------    <---------KAN4(1)  ----------->GT1      <------------CBF                                  <------ --->At4g35610    --------->LBD16          --------->ATHB12                <-----------RAV1(1)<------ --->ZAT2 --------->LBD16     --------->O2<---------YAB1            ------>ZmHOX2a(1)      <---------TOE2(3)   tgaagaacgttccggtgttccgagatggaaacacgtggaaaatgcttattggctataattttgagttatcctctcttatgttgttttagcaccaaggata  13522100          --------->TOE2(3)          --------->TOE1(3)    --------->YAB1    -------->HAHB4                                                        ------>ZmHOX2a(2)    <---------ICU4                                                       <------ZmHOX2a(2)   <---------YAB1                                                       <---------ARR14(3)   --------->ICU4                                                       --------->ARR11(3)   <---------ATHB12                                                     <---------ARR11(3) ----->ZmHOX2a(1)                                                       --------->ARR14(3) -----ARR11(3)                                                          --------->ARR14(2) -----ARR14(2)                                                <-----------GT1 ---->ARR14(2)                                           --------->AHL20(1) ---->ARR11(3)                                      ----------->TBP     --------->AGP1 ----GLK1(1)               --------->ATHB12       --------->YAB1        <---------ARR14(2) --->GLK1(1)              <---------YAB1    --------->HSFB2a(2)    <------ZmHOX2a(2) -->ARR11(3)              --------->ICU4    <---------HSFB2a(2)  ------->GAMYB -->ARR14(2)    <-----------ARR10      <---------At4g35610    --------->MYB52(1) ---ARR14(2)    --------->ARR11(3)    --------->ARR11(3) --------->AHL20(2)                        -- ---ARR11(3)    <---------ARR11(3)    <---------ARR11(3) <---------AHL20(2)          ---------->DOF2   tcctaatgataaccctaatatctgagcgatgattagaagagagcttctacaagtataaataaaataacgatcgagatcttgttagagcaaagccctagtt  13522200                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                       ------>ZmHOX2a(2)                                                                                       ----------->GT1                                                                                      <------ZmHOX2a(2)                                                                                     --------->ARR11(3)                                                                                     <---------ARR14(2)                                                                                     --------->ARR14(2)                                                                             <---------ARR11(3)        <---------O2         --------->AHL20(2) <---------TOE2(3)            --------->ARR11(3)    --------->YAB1         <----------DOF2      <---------TOE1(3)        --------->ICU4==============   <---------ATHB12     ------>NtERF2---------->DOF2                  --------->WRKY18(1)   --------- ---------->CBF --------->ATHB12  --------->TOE2(3)                  <-----------HVH21===============   taccaatgagacttggcttcatttgcctcctttaaatctcaaagtcgtttaaggttttttttttttcagacggtcatgagttcttcagatcgtgacatca  13522300                                                                                                    -                                                                                                    <                     --------->ARR11(3)                                                          ----                     <---------ARR11(3)                                          <---------ZAT14 <---                     --------->ARR14(2)                                    <---------ARR14(2)    <---                     <---------ARR14(2)       <---------bZIP60(1)          --------->ARR14(2)    <--- -TGA2(1)--------->YAB1                       --------->bZIP60(1)         <------ZmHOX2a(1)    <----- >bZIP60(1)        ----------->ARR10     <---------DOF5.7(2)           <------ZmHOX2a(1)    <-------- -bZIP60(1) <------ZmHOX2a(1)         <---------MYB46(3)             --------->ALFIN1    <---------MYB46(3) ==================HOX2a_HOX2a     <---------MYB46(3)             <------ZmHOX2a(1)     <---------AtMYB61 >TGA2(1)<-----------RAV1(2)      --------->ALFIN1             <-----------RAV1(2)      --------->ALFIN1 ==================HOX2a_HOX2a    <---------AtMYB61            --------->YAB1<---------------AtSPL8 -   tcgatatcgaatcaggagaagaagatttgtatagcgatggtggtaacgacatcatcgatatcgaatcaggagaggaggatttgtacagcgatggtggtaa  13522400      --------->WRKY38(1)                             <---------ANAC58    --------->At4g35610                               <---------ANAC46 -------->ARR14(2)                                    --------->ANAC55(2) ---------ARR14(2)                                  <-----------GT1 ----->ANAC55(2)                                --------->DAG2 ------ANAC58           --------->ANAC58       ---------->DOF2            <---------ARR11(3) ------ANAC55(2)        --------->ANAC58 ------>ZmHOX2a(2)         <------ZmHOX2a(1) ------ANAC58           --------->ANAC46 =================================HOX2a_HOX2a ----DOF5.7(2)         --------->SPL7  <---------ARR14(2)        <---------TOE2(3) -MYB46(3)           <---------ETT(2)  --------->ARR14(2)        <---------TOE1(3)       ---------->DOF2 ------>TEIL--------->REM1(1)          <---------AGP1 <---------ANAC58    --------->ARR11(3)  -------   cgtatccgatgactacaaccctgtggacgacacaattagtcgatctgagaaaagttacgttgttgttaaggaagaagacattcttaagcttcaaagagac  13522500                              --------->ANAC58                            --------->ALFIN1                              --------->ANAC58                          <---------ANAC58                 --------->HSFC1(2)                                     <---------ANAC58                 <---------HSFC1(2)                               -------->ATHB1                 --------->HSFB2a(1)                              --------->ATHB12                 <---------MYB46(3)                               --------->YAB1 --------->ZAT14                 <---------DEAR3(2)--------->O2                  <---------YAB1  <---------ZAT18 -->CCA1(2)     <---------DEAR3(1) <---------O2      <---------At4g35610<---------ANAC46    <--------   gatatcgaacaagtttcgacggttctctctgtaagccaagtggaatcgattgttctgcttcttcactatcattggtgtgttagtaaactcgaagatgaat  13522600                                <------MYB83                                <------MYB46(1)                              <---------MYB52(1)                       ---------->DOF2                     --------->LBD16                    ----------->GT1                    <---------ANAC55(2)                         <---------------AtSPL8                    --------->ANAC55(2)              <-------GAMYB            --------->ARR11(3)                 --------->GLK1(2)                  <---------ANAC46          <---------ARR11(3)  <--  <---------LBD16--------->ARR14(2)                 <---------MYB46(3)        <---------ARR14(2) <--- -YAB1           <---------ARR14(2)     ---------->DOF2  <---------TOE2(3)    --------->ARR14(2) <---   ggtttacggacgaagagagaatccgtaaaaccgttggtatattaaaggagcctgtcgttgatgttaatggtacagaagtggatattcaatgtggaatttg  13522700                                                                           --------->REM1(1)                                                                           --------->bZIP60(1)                                                                           <---------TGA2(1)                                                              --------->ZAT2                                                 <---------ICU4            --------->TGA2(1)                                                <---------YAB1--------->At4g35610                 <--                                                ------>ZmHOX2a(1)          <---------bZIP60(1)    <--                                   <---------ANAC46       --------->ARR14(2)                      <--     --------->YAB1                <---------ANAC58       <---------ARR11(3)       --------->ANAC46 --------DOF2             <---------ANAC58     --------->TOE2(3)      ----------->GT1            <--- ------ANAC58             <---------ANAC58   --------->ICU4   <---------ZAT2       --------->ANAC58 ------ANAC58  ---------->DOF2     <---------ANAC58       --------->ARR11(3)       --------->ANAC58 <   ctttgaatcatacactcgaaaggaaattgctagggtttcttgtggtcatccttattgcaagacctgctggactggttacatcactacgaaaatcgaagac  13522800  Previous    Next  AGI:  At2g31780.1    Description:  protein binding / zinc ion binding. similar to zinc finger protein-related [Arabidopsis thaliana] (TAIR:AT2G31760.1); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G31770.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64272.1); contains InterPro domain Zinc finger, C6HC-type; (InterPro:IPR002867); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 13522276    to: 13524490    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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