Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         --------------                                                          ---------->DOF2             ---------->DOF2                                                   <---------WOX13(1)      <---------HSFB2a(2)   ----                                                <---------YAB1             --------->HSFB2a(2)-------               --------->AHL20(2)               <---------AHL20(2)      XXXXXXXXXXXXXXXXXXXXX>MIR850       <---------ANAC55(2)   <---------GLK1(2)<----------DOF2   ----------->GT1 --------->AtMYB61----   gaaaacatcacttaaaattatacaaaaaacaaattcttgaaaacatcactttaattgatacaaagggagtataaattctagaccaaaacaaagtactaat  13518300                                          <---------ARR14(2)                                          --------->ARR14(2)                                          <---------ARR11(3)                                          <---------ARR11(1)                                         <---------ARR14(1)                                         <                                         ------>MYB46(1)                                      <------                                         <---------CCA1(2)                                   <-------                                       <---------MYB59                                     <---------AHL20(2) --------->GLK1(2)                  <-----------GT1                                        --------->AHL20(1) --------->ARR11(3)              --------------->AtSPL8                                    --------->AHL20(2) <---------ARR11(3)              <---------------AtSPL8              <-----------GT1       <---------AHL20(1) ->AtSPL8                    --------->ARR11(3)                     <-----------GT1    <---------AHL20(2) ----->YAB1                  <---------ARR11(3)          <-----------GT1               --------->AHL20(2) -->YAB1                     <---------GLK1(2)  --------->YAB1  <---------MYB52(1)     <---------YAB1 ----->AHL20(2)          ---------->DOF2 ------>MYB83 <---------AHL20(2)     ---------->DOF2---------   aaaaatctatcgttttgaaatcaaatctaaagatttttgtaccaaatctttcatattttatactccgtttttaacgtctaaaagaagttttaattaattg  13518400                                                                                                  <--                                                                                                  ---                                                                                   ------>ZmHOX2a(2)                                                                                  <------ZmHOX2a(2)                                                                                  --------->GLK1(1)                                                                                  <---------GLK1(1)                                                                                 --------->ARR14(3)                                                                                 <---------ARR14(2)                                                                                 --------->ARR14(2)--                                                ----------->GT1                  <---------ARR14(3)<-                                    <-----------GT1 ---------->DOF2              --------->ARR11(3)<- ----------DOF2     --------->CCA1(2)         ---------->DOF2                    <---------ARR11(3)-- ---WOX13(1)       <---------ARR11(3)      --------->AHL20(2)             <----------DOF2   --------- -----CBF          --------->ARR11(1)      <---------AHL20(2)         <-----------GT1      ---------- >ATHB12       ---------->DOF2  <----------DOF2--------->DAG2       <---------AHL20(2) ------>ZmHOX2a(1)   gtctttcaagtttcaacaaaagatttgagtttatcttttaacaaattaaaaagtaaaagttcaaaactatttattccttttaagatctcctaataaagcg  13518500         <---------ZAT2      <---------ANAC58     ------>NtERF2    <---------PCF2 --------->ALFIN1 -------ARR14(2)                   <---------YAB1 ------>ARR14(2)                 =======================HOX2a_HOX2a                   <---------MYB52(1) ------->At4g35610               ------>ZmHOX2a(2)                              --------->HSFB2a(2) --------ZAT2                    ----------->GT1                                <---------HSFB2a(2) --------At4g35610             --------->ARR14(2)                         --------->ARR11(3)        - ------->ZAT2       <---------ANAC46                                      <---------GLK1(2)    ------ >DAG2--------->ATERF1(1)      <---------ARR14(2)                         <---------ARR11(3) <------- >DOF2<---------ANAC58         --------->ARR11(3)<------ZmHOX2a(1)      ----------->ARR10    <-------   gagctggggcctgctagtagtagcctatacaaggatcgtgattacaagagaggacttattctatagcaaaaccctagattttctagcagtttgtttcgtc  13518600                                                        ------->TEIL                                               <---------ATERF1(2)                                               --------->ATERF1(2)                                              <------NtERF2                                             <---------ATERF1(1)                                             ------>NtERF2                                            ------->GAMYB                                            --------->ATERF1(2)                                            --------->RAP2.3(3)                                            --------->RAP2.3(2)                                            --------->DEAR3(1)                                            <---------ATERF1(2)                                           --------->ERF1 <----------DOF2      --------->YAB1                                           --------->RAP2.3(1)               <---------WOX13(1)                                           --------->DEAR3(2)              --------->ATHB12       ------>ZmHOX2a(1)       <---------TOE1(3) <---------MYB52(1)       --------->ICU4    ------>ZmHOX2a(1)      <----------DOF2 --------->MYB46(3)             <---------YAB1         <--- ----->ZmHOX2a(1)      <-------TEIL        --------->ATERF1(1)          <---------bZIP60(1)     ----- ---->ID1       --------->TOE2(3)         --------->At4g35610           --------->bZIP60(1)    ------ --ANAC58       --------->TOE1(3)         <---------At4g35610   --------->At4g35610      <-----------RAV1(2) --ANAC58    <-----------GT1   <---------TOE2(3)--------->LBD16 <---------At4g35610     <---------ATHB12   tccttcctcctaaattaacctcaaattcgttttagggtttcttcagccgccggtaatggacttttcagatgatgacatgattgataacaaatcaggggag  13518700                                                                                    <---------GLK1(2)                                                                                <---------O2                                                                                <---------ANAC55(1)                          ------->TEIL                                          <---------ANAC58                          --------->GLK1(2)                                     <---------ANAC55(2)                  <---------MYB46(3)                       <---------ICU4       --------->ANAC55(2)               <---------MYB46(3)                          -------->ATHB1       <---------bZIP60(1)              <---------AtMYB61                            --------->ATHB51     --------->bZIP60(1)       <---------At4g35610<---------ARR14(2)              <---------YAB1        <---------ANAC58    <---------At5g28300   --------->ARR14(2)              --------->ICU4        <---------ANAC46    < ---ZmHOX2a(1)--------->ALFIN1                --------->ALFIN1                <-----------GT1       - ------>GT1<---------AtMYB61    --------->WRKY38(1)       <---------ATHB51--------->DAG2   --------->ANAC58 --->ALFIN1<-----------RAV1(1)--------->At4g35610    --------->ANAC46    ---------->DOF2   --------->ANAC58   gagaattacagctatggtggtggtaacgaatccgatgactacaacgatgtggtagacacaattattccatcggagaaaagttacgtgattctcaaggaag  13518800                                                                      --------->ATHB12                                                             <---------O2                           -               ---------->DOF2                          --------->ANAC58                          <--         --------->ANAC58                               --------->ANAC46                          <--         --------->ANAC58                       <----------DOF2--------->ALFIN1          <----------- ---------ARR11(3)                          <---------GLK1(2)--------->O2      <---------At4g35610<-- -------->ARR11(3)  --------->CCA1(2) <-------TEIL      --------->ANAC58<---------WOX13(1) <---------YAB1   aagacattctcaagcttcaaagagacgatatcgaacgagtttcatcgattctttctctaagccaagtggaagtgattgttctgcttcttcactataactg  13518900                                                          <------MYB83                                                          <---------MYB46(3)                                                          <------MYB46(1)                                                         <---------AtMYB61                                                        <---------MYB52(1)                                                  --------->DAG2                                                 ---------->DOF2                 --------->WRKY45       ---------->DOF2                          <---------MYB52(1)               --------->WRKY38(1)       --------->ZAT14                         --------->LBD16                   --------->WRKY12 -------->ALFIN1                              <---------ANAC55(2)               --------->DOF5.7(2) -------ANAC46                                --------->ANAC55(2)              <-------GAMYB -------ANAC58                             <---------ARR14(2)                 <---------ANAC46 ----AGL15                                 --------->GLK1(2)          <------ZmHOX2a(1)      <------- -------ANAC58              <---------LBD16--------->ARR14(2) --------->ATHB12<---------MYB46(3)    -   gtgtgttagtaaagtcgaagacgaatggtttacggacgaagaaagaatccgtaaagccgttggtttattgaaggagcctgtcgttgacttcaatggtgga  13519000                                                                                                <----                                                                                               ------                            >>>>>>>>>>>>>>>>>LFY                                               <-----                           <---------ARR14(2)             --------->ANAC46                    -------                           --------->ARR14(2)       --------->YAB1                <---------ANAC58  <----------ID1    ----------->GT1          <----------DOF2                      <---------ANAC58 --ANAC46          --------->DAG2           <---------ANAC58                      <---------ANAC46 --------->DOF2   ---------->DOF2           <---------ANAC58      <------ZmHOX2a(1)         ---------   gaaaaagacaaaaaatgtagaaaagtgaatatccaatgtggaatttgctttgaatcatacactcgagaggaaattgcaagggtttcttgtggtcatcctt  13519100                      --------->REM1(1)                      --------->bZIP60(1)                                                         <--                      <---------bZIP60(1)                                                         <--                      <---------TGA2(1)                                                         <----                      --------->TGA2(1)                      ----------->GT1                   <-----                 <------MYB46(1)                           <---------TOE2(3)                  <------                 ----------->GT1                 --------->LBD16                              <------          <---------ANAC58                      <---------LBD16                             <-------- -----ICU4<---------ANAC58                     <---------LBD16                           --------->LBD16 >ZmHOX2a(1)     <------MYB83                <---------SPL7<---------TOE1(3)             --------->At4g35610 ----YAB1----------------------->TaNAC69(2)  <-----------HVH21                           <---------At4g35610 -->TOE2(3)      <---------MYB46(3)          <---------ARR14(2)          ------>ZmHOX2a(1)  --------- >ICU4   --------->ZAT2                     <---------DEAR3(2)         ----------->RAV1(2)  <--------   attgcaagacttgctgggctggttacatcactacaaaaatcgaagacggtccgggatgtttaagggttaaatgtcctgagccttcttgttccgctgctgt  13519200  Previous    Next  AGI:  At2g31770.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to protein binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT2G31780.1); similar to zinc finger protein-related [Arabidopsis thaliana] (TAIR:AT2G31760.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64272.1); contains InterPro domain Zinc finger, CCHC-type; (InterPro:IPR001878); contains InterPro domain Zinc finger, C6HC-type; (InterPro:IPR002867); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 13518656    to: 13520627    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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