Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           <---------ZAT18                                                                                         --------->ZAT14                                                                                         <---------ZAT14                                                                                   ------>ZmHOX2a(1)                                                                               --------->ARR14(2)                                                                              <---------KAN4(1)                                                                              --------->KAN4(1)                                                                              <---------GLK1(1)                                                                              --------->GLK1(1)                                                                             ---------->TaMYB80                                                               --------->ANAC46<---------ARR11(3)                                              --------->YAB1   --------->ANAC58--------->ARR11(3)                                             --------->ICU4    --------->ANAC58<---------ARR14(2)     ----------->GT1             ---------->DOF2             <---------ALFIN1<---------KAN4(2)    ---   agagaaggtgttaataactctcatgcttctgaagacaaagcagagcaattgttatgcaacgagacacgcctacttatcgaatatcctacagagcacaata  13494100                                                                           --------->ARR14(2)                                                                    ---------->DOF2                              ------>MYB46(1)                   --------->ANAC58                              ------>MYB83                      --------->ANAC58                    -                     <---------ANAC58                          ------->TEIL<---------ARR14(2)     <--                     <---------ANAC46                       --------->ANAC58                      <--    --------->AHL20(2)      <---------MYB59            <---------------AtSPL8                   -----    <---------AHL20(2)    ------->TEIL                 <---------------AtSPL3              <---------AtLEC2 -------->GT1        <---------ANAC58       ---------->DOF2 --------->ANAC58         <----------DOF2-   tagtaattaaaccagagcaattgtcgtgaacctaatccatagtgtctaaagacgaatatagtacgaacccaaatgcaaattttcagacttttttcatgaa  13494200                                                   --------------->AGL15                                                   <---------------AGL15                                                  ----------------->AGL3                                                  ----------------->AGL2 ----->MYB46(1)                                   ----------------->AGL1 -------MYB111(1)                               --------->GLK1(2) -------MYB59                              ---------->DOF2 -->TEIL                                   --------->YAB1     --------->At4g35610                   < ----->MYB83                              <---------ATHB12 <---------At4g35610----------->GT1 -------   cctactcaattcatcaaatttgaaactagcattgtatcaaaccaataaagattccatattcagaagctaacattgctaaattgttatatcagagagaatt  13494300                  <-------TEIL                                            <---------At4g35610              --------->DAG2                                              <---------ZAT2         --------->HSFB2a(2)                                              --------->At4g35610--------         <---------HSFB2a(2)                                              --------->ZAT2    ---------     <---------At4g35610             ----------->HVH21                 ---------->DOF2     <-------TEIL     <---------ZAT2   --------->ARR11(3)                            <------ZmHOX2a(1)   --------->ZAT2     --------->At4g35610           ----------->RAV1(2)     ================HOX2a_HOX2a  --------->At4g35610     --------->ZAT2   <---------GLK1(2)                    ------>ZmHOX2a(2)            <---------At4g35610 ---------At4g35610   <---------ARR11(3)  ----------->GT1--------->ARR11(3)          <---------At4g35610 -->GLK1(2)  ---------->DOF2       ----------------->AGL1<---------ARR11(3)          --------->At4g35610   tatgctgagctcgcgaaaagtacagatttttgtatatacctgaagggtgaaattgatgtgatcttggataggagaaagctgagtctgagcagctacatta  13494400                                                   <------NtERF2                                                 <------NtERF2                                                --------->ABI4(1)                                                <---------At4g35610                                                --------->At4g35610                                                --------->LBD16                                                <------NtERF2                                                ------>NtERF2                                               --------->RRTF1(2)                                               --------->RAP2.3(2)                                               --------->DEAR3(1)                                             --------->LBD16                                             ------>NtERF2            <------NtERF2                                       <----------DOF2               ------>NtERF2          <--------                            --------->ARR14(2)--------->RAP2.3(1)  ---------->ID1        --------->ICU4 ->TOE2(3)                  <---------ARR14(2)--------->RRTF1(1) <-----------RAV1(1)<---------ANAC58 >REM1(1)<----------DOF2  --------->ANAC46  --------->ANAC46 ------>ZmHOX2a(2)      <---------ANAC58   acttcttcaagctttcttcgaagtctctccgatacgatttgctcttccgccgcagcgatgtgatccattgtcgccttctctgtttagcgtaattttgatt  13494500                                                         --------->ANAC58                                                         --------->ANAC58                                                      --------->LBD16                                                     --------->ANAC46                                                     --------->RAP2.6(2)                                             ------------>CBF                       --------->At4g35610  ------>ZmHOX2a(1)                      *TSS                ------>ZmHOX2a(2)                    <---------ZAT2       <------ZmHOX2a(2)                    --------->ZAT2      <---------ARR14(3)                                         --                    --------->At4g35610 <---------ARR14(2)                                         <-                <---------At4g35610     --------->ARR11(3)                                        ---                --------->STY1(2)       <---------ARR11(3)                            ----------->GT1        <---------TOE1(3)               --------->ARR14(2)              ------------>CBF          <--    <----------DOF2 <---------At4g35610 --------->ARR14(3)    --------->MYB52(1)    <---------ANAC46 -YAB1  <---------TOE2(3)     ------------>CBF      <---------LBD16   ----------->HVH21          <---   ttagggctttagggttttagctagctgctctcttcaatagaagatccttcaatagccgcaaacaaaacgggtttgacaattttgggtcgggttaagtttc  13494600                                                                                  <---------MYB52(1)                                                                             <-----------HVH21                                                                        <---------WRKY18(1)                                                                       --------->WRKY38(1)                                                                       ----------->HVH21  <---------GLK1(1)                                                --------->WRKY18(1)  --------->GLK1(1)                                               <---------MYB52(1) ------->LBD16                                                    <-----------HVH21 --------TOE1(2)            <-----------GT1                    <---------LBD16   <-------GAMYB ------>LBD16          <----------DOF2               <------ZmHOX2a(1) --------->WRKY12 -------LBD16   <---------MYB52(1)            --------->AHL20(2) --------->LBD16----------->GT1 ------LBD16  ----------->GT1            <----------DOF2<---------At4g35610  <---------MYB52(1)   ccgggtttctctaaaccggttaactctttttcaccaattcaaactttattaaacaggaagctaattccggtcattgaccggtccgttaaacttcgcatta  13494700                     --------->AtMYB61                     <---------ALFIN1                     ----------->RAV1(1)                  --------->RAP2.6(2)                                         <---------ARR11(3)               --------->ANAC58                                       ------>MYB83               --------->ANAC58                                       ------>MYB46(1)               --------->ANAC46                                     --------->DREB2C(2)      <-------            --------->ANAC46                      --------->MYB52(1)--------->DEAR3(1)       --------     <---------ICU4------>NtERF2         --------->At5g28300   <-----------HVH21        <---------ICU4     ----------->GT1--------->MYB46(3)  ----------->GT1   --------->MYB46(3)  --------->ARR11(3)   gaatcaattgttacaagaagccaccacagagttgggattaagcagtaaaaaataacagaaacagccatcaccgacttcaaggtctctccatcaatacatg  13494800                                                      --------->At4g35610                                                      <---------At4g35610          <----------DOF2                          --------->At4g35610     ---------->DOF2                               <---------At4g35610    --------->AtMYB61                           <---------At4g35610 --ANAC55(2)            --------->TOE2(3)       --------->At4g35610                       ---------->DOF2 ->ANAC55(2)          <---------YAB1       --------->GLK1(2)  ---------->DOF2        ----------->GT1   atcagaccaaagctttggctaattttcattagtcttgagacagagaatttagcagcagctcattgaaagggcgaattagaagacgagagattaaaagcat  13494900                                                                                --------->ANAC58                                                                           <----------ID1               <---------REM1(2)           <---------MYB46(3)       <<<<<<<<<<<<<<<<<LFY               <---------ZAT14           <---------MYB52(1)        --------->ANAC46    <-----------RAV1(1)              ----------->RAV1(1)        --------->ZAT14 --------->ANAC46   <---------ARR11(3)              --------->At4g35610          --------->ARR14(2)         <---------   --------->ARR11(3)<------ZmHOX2a(1) --------->ATHB12      <---------ANAC46   --------->ANAC58   gagaagatgttggagtcttcacaggagcccaaatatcagcaccattggtttgagcaacttctgatgtatactccaatggaacaagacatagccctttact  13495000  Previous    Next  AGI:  At2g31725.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G05730.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73933.1); contains InterPro domain Protein of unknown function DUF842, eukaryotic (InterPro:IPR008560) Range:  from: 13493394    to: 13494522    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g31730.1    Description:  ethylene-responsive protein, putative. similar to ethylene-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT1G05710.1); similar to ethylene-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT1G05710.3); similar to ethylene-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT1G05710.4); similar to hypothetical protein [Vitis vinifera] (GB:CAN65949.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 13494645    to: 13496756    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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