Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               --------->YAB1                                                                            <---------ATHB12                                                                  --------->YAB1                                                                 <---------ATHB12                         --------->ARR14(2)            --------->TOE1(3)   --------->ANAC58                 <---------WOX13(1)                    --------->YAB1      --------->ANAC58               ------>MYB83                            --------->TOE2(3)  --------->WOX13(1)               ------>MYB46(1)              <------ZmHOX2a(1)  --------->WOX13(1)             <---------MYB59              <---------TOE2(3)--------->At4g35610 --MYB59   <---------ARR11(3)       <---------------AGL15  <---------At4g35610     <---------ICU4   tttgcagtttcaagacctaattgactaaatccactattcaaattgaggaaatactaatcttagctcaatcaaatcgcaatcaaaatcaatacagacttac  13481700                                                                                  --------->LBD16                                                                                 --------->RRTF1(3)                                                                                 --------->DEAR3(1)                                                                                 --------->RAP2.3(2)                                                                                --------->ORA47(2)                                                                                <------NtERF2                                                                                --------->ATERF1(1)                                                                                --------->ERF1                                                                                --------->RAP2.3(1)                                                                               <---------ERF1                                                                               <---------DEAR4(2)                                                                               --------->ABI4(2)                                                                               ------>NtERF2                                                                               <---------ATERF1(1)                                                                               <---------RRTF1(1)                                                                               <---------RAP2.6(1)                                                                               <---------RAP2.3(1)                                                                              <---------RAP2.3(2)                                                                              --------->DEAR3(1)                                                                              <---------DEAR3(1)                                                                              <---------RRTF1(3)                                                                             <---------ABI4(2)                                                                             --------->RAP2.3(1)                                                                             --------->ATERF1(1)                                                                            <---------DEAR4(2)                                                                            <---------RRTF1(1)                                                                            <---------RAP2.3(1)                                                                            <---------ERF1                                                                            <---------ATERF1(1)                                                                            <---------ORA47(2)                                                                            <---------RAP2.6(1)                                                                            ------>NtERF2                                                                           <---------O2                                                                           --------->DEAR3(1)                                                                           --------->ANAC46                                                                           --------->O2                        <---------ALFIN1                                   <---------DEAR3(1)                       ------>MYB46(1)                                     <---------RAP2.3(3)                       ------>MYB83                                      ------>NtERF2                     --------->AtMYB61                                   <---------ATERF1(1)                    --------->MYB46(3)                                  ----------->HVH21                  ------->GAMYB                                         --------->DEAR3(1)                 <---------MYB52(2)                                 --------->At4g35610                 --------->MYB46(3)                                 <---------GLK1(1)                 <---------MYB55(2)          ------>NtERF2          --------->ZAT2<------NtERF2               --------->MYB52(1)      --------->ARR14(2)           <---------ZAT2------>NtERF2     -           --------->ANAC46            <---------ARR14(2)           --------->GLK1(1)              --           --------->ANAC58         --------->ALFIN1                <---------At4g35610--------->YAB1           --------->ANAC58        <-------MYC3             <----------ID1--------->SPL7    <--------   --------->At4g35610 -------->P  ------->MYC3         --------->DOF5.7(2)<---------RAP2.3(2)     --   <---------At4g35610----------->RAV1(1)------>ZmHOX2a(2)<---------DOF5.7(2)<------NtERF2  ---------   tcttgagctcatcaagccaacgaccaacactctcaaacgtggatcgacgactaatatcgtaaacgacgagagctccgacggcgccgcgataataagcgga  13481800          --------->ARR14(2)          <---------ARR14(2)       --------->ANAC58       --------->ANAC46    <------NtERF2   ------>NtERF2  --------->bZIP60(1)  <---------RAP2.3(3)                                                                              --  <---------ATERF1(2)                                                                             <--  --------->ANAC58                   --------->ARR14(2)                                          <---  --------->ANAC58                   --------->GLK1(2)                                           ----  <---------bZIP60(1)                <-----------ARR10                                       ------>NtERF2  --------->ATERF1(2)                <---------ARR14(2)                 --------->ARR14(2)  --------- --------->RAP2.6(3)          --------->ARR14(2)                 <---------GLK1(1)--------->HSFB2a(2) -------->MYB52(1)            <---------ARR14(2)           --------->TOE2(2)  <---------ANAC58 ------ --------->TGA1          --------->At4g35610               --------->TOE1(2)  <---------ANAC58<------NtERF2 -LBD16--------->ANAC58 ----------->RAV1(1)             <-----------GT1 <---------GLK1(2)   <-------- --------->HVH21    <---------WRKY18(1)      <----------DOF2     --------->GLK1(1)<---------HSFB2a(2) >At4g35610    <---------MYB52(1)   <---------CCA1(2) <----------DOF2   <---------ARR14(2)  ---------   agtgacggcacgaaaccgttcttgaccagcagtatcccaaatctgagctttaacttctttaccttcgatttccatattctgcgtctggaactcgacgccg  13481900                                                                  <------NtERF2                                                                 ------>NtERF2                                                                --------->ANAC46                                                                <---------DEAR3(1)                                                                --------->ATERF1(2)                                                                <---------ATERF1(2)                                                               --------->RAP2.6(3)                                                               --------->SPL7          --------->ARR11(3)                                                              ------>NtERF2<------NtERF2                                                              --------->MYB52(1)       <---------ARR11(3)                                                             ----------->HVH21     <-----------GT1 ---->ZmHOX2a(2)                                            <---------HSFB2a(2)    --------->ZAT6 ----ZmHOX2a(2)                                             --------->HSFB2a(2) <---------ICU4 ------ARR14(2)                                         <---------GLK1(1)<---------DEAR3(1) ----->ARR14(2)                                     <-------TEIL--------->TGA1a --------->YAB1    <-- >DEAR3(1)                    <---------ANAC58   --------->HSFB2a(1)     --------->DEAR3(1)       --- --->DEAR3(1)                 <---------ANAC46   <---------HSFC1(2)   <---------ARR14(2)          <-- -DEAR3(1)         --------->WRKY12              --------->HSFC1(2)   --------->ARR14(2)          --- >ANAC46         <-------GAMYB<---------ANAC58   <---------HSFB2a(1) <------NtERF2<---------YAB1-----   atcgtggccttggaatgagcgttgaactcgttacgagcatagcgagagagaaggttcgatttcccgacggcagagtcgccgattatcactatcttgaata  13482000                         --------->ANAC58                         <---------ETT(2)                         --------->ANAC58                         --------->ETT(2)                        --------->SPL7                      <---------SPL7                     --------->TOE1(1)                     --------->TOE2(1)          ------>ZmHOX2a(1) -------GLK1(2)     <---------At4g35610 ------>ARR11(3)    --------->At4g35610 -------ARR14(2)<-----------TGA1 ------>ARR14(2)<-----------HVH21             <---------YAB1                                        - ------>ARR10------>ZmHOX2a(1)   <---------MYB52(1)           ---------->DOF2                     ---   gatactcttctcctccttcgtcatcggacgacatcgttttttttgtttctgattttgagagagagaaagttgcagactggttttagagagagagagagag  13482100                                                           <---------AHL20(2)                                                           --------->ATHB51                                                           --------->ATHB12          ---------->DOF2                                  <---------ICU4                         ---        <------NtERF2                                      --------->AHL20(2)                    <---    <---------At4g35610                                   --------->ICU4                  <---------ANAC58    <---------ZAT2                                     --------->AHL20(2)                 <---------ANAC46    --------->At4g35610                                <---------AHL20(2)                 <---------ANAC58    --------->ZAT2           *TSS                 ----------->GT1               <---------ANAC46 ---- -------->ALFIN1   --------->ATHB12            <---------bZIP60(2)         <---------ANAC58  <------- ------>CCA1(2)   <---------YAB1    ---------->DOF2    <---------YAB1      <---------ANAC58  --------   agatggagctggcaaaggaaatgatagagaagaagacataatgcgcatgaagtggttttaattatttgttttgaattatgtgccatgtaattcggtgcaa  13482200      <---------ANAC58      <---------ANAC58    <---------ARR11(3)                 ----------->GT1    --------->ARR11(3)             <---------ARR11(3) ------>YAB1                       <---------AHL20(1)                                              <- ------ATHB51           --------->MYB52(1)                                           <---------At4g35610 ----->ICU4<---------ANAC58        --------->AHL20(1)                                --------->At4g35610 --ZAT18   <---------ANAC46        --------->ARR11(3)           <---------ATHB12     --------->ZAT2<- ---->CBF  <---------ANAC58 <----------ID1              ---------->DOF2<---------At4g35610 ------>NtERF2   ttataagttcttgtcgtgtcaaaaactaatgggccaaaatattgtatattaagcccaaaacagcccataattcatcagcgtttaagtagctgaggcctct  13482300        <------MYB83        <------MYB46(1)       <---------AtMYB61       <---------MYB46(3)      <---------MYB55(1)      <---------MYB52(1)                                            --------->ATHB12      <--------P                                                    -------->HAHB4     <-------GAMYB                            <----------DOF2       <---------ICU4    <---------MYB46(3)                      <---------YAB1          --------->YAB1   <---------RAP2.6(2)                     --------->ARR11(3)      <---------ATHB12  <---------ZAT18                      <---------ICU4   <---------AHL20(2)  <---------ZAT14                     <---------YAB1   <---------AHL20(2)  --------->ZAT18                     --------->ICU4   <---------AHL20(1)                    <------- --------->ALFIN1                  <---------YAB1      --------->AHL20(1)               <---------AtLEC2 --------ANAC58           <-----------GT1  <---------ARR11(3)      --------->ICU4     <---------YAB1 --------ANAC58          <-----------GT1 <---------YAB1--------->AHL20(2)      ------->TEIL  <-------   agagtgcggttggtctaaaatgagtatttaacacattttgattattatctttgttaatttaatgtgtaaatgattacgatgtatatttctgaatggctta  13482400        <---------ARR11(3)        --------->AHL20(1)        <---------AHL20(2)        --------->ARR11(3)        --------->AHL20(2)        <---------AHL20(1)     --------->AHL20(2)    <---------YAB1  --------->YAB1 <---------YAB1                                                                            <--------- <---------ATHB12                                                              --------->YAB1 --------->ICU4                                                               <---------ATHB12 --ANAC58              <-----------GT1              --------->YAB1          --------->WOX13(1)     -- --ANAC58         --------->ICU4             <----------DOF2               --------->MYB46(3)    ----   acaatgataatatattagacataattttcagtcttcgaaataagttactttgaatcatataaacacaaaatataacaacaatcaatagtctatatactgt  13482500                                           <---------WRKY45                                      <---------MYB52(1)                                     --------->TOE2(3)             <---------LBD16                                     --------->TOE1(3)       <---------YAB1                                   <---------TOE2(3)    <---------ICU4<------NtERF2                           <---------ARR14(2)           ------>MYB83 <------NtERF2    ----------->RAV1(1)    <---------GLK1(2)---------->DOF2 <---------At5g28300 --GT1                     --------->ARR14(2)           ------>MYB46(1)  <------ZmHOX2a(1)        --- ------->KAN4(2)        <---------ANAC46--------->MYB52(2) <-----------GT1                   <------ZmHOX2a(1) --->TEIL   <---------AHL20(2)     <---------TOE1(3)  <---------MYB59--------->LBD16 --------->YAB1   atgttcccacatatgaaattgaagggccgtattctctaacgttagtcaaagtatgacctaattaccatggccggaggaattagggaagaataagaggaga  13482600  Previous    Next  AGI:  At2g31680.1    Description:  AtRABA5d (Arabidopsis Rab GTPase homolog A5d); GTP binding. similar to ARA/Ara-1/AtRABA5e/AtRab11D (Arabidopsis Rab GTPase homolog A5e), GTP binding [Arabidopsis thaliana] (TAIR:AT1G05810.1); similar to small GTP-binding protein (GB:AAA68983.1); contains InterPro domain Rab11-related (InterPro:IPR015595); contains InterPro domain Ras GTPase; (InterPro:IPR001806); contains InterPro domain Ras (InterPro:IPR013753); contains InterPro domain Small GTP-binding protein; (InterPro:IPR005225); contains InterPro domain Ras small GTPase, Rab type; (InterPro:IPR003579) Range:  from: 13480671    to: 13482129    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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