Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <-----------GT1               --------->AHL20(2)         --------->AHL20(1)               <---------AHL20(2)         <---------AHL20(2)                                      ---           <------ZmHOX2a(1)        --------->ANAC58                                              ---     <-------MYC2                   --------->ANAC58                                            -----     <-------MYC3           <---------HSFB2a(2)                                               ------>ZmHOX2a(1)     ------->MYC3           --------->HSFB2a(2)                <---------ATHB12   <---------AHL20(2)     ------->MYC2           <---------HSFC1(1)               ------>MYB83        <---------AHL20(2) <---------At4g35610        >>>>>>>ZML2   --------->AHL20(2) ------>MYB46(1)     --------->AHL20(2)   ttcagcatatgcaggatttaaacacttgttctagaggcacaaaataaaatgaagcattgaaccaaatcaaggtccgaaacaaaataaatggttatcctga  13420400                                            <------MYB46(1)                                            <------MYB83                                           --------->MYB111(2)                                           <---------AtMYB61                <---------ZAT18                                           --------->MYB46(2)--------->ANAC46                                           --------->MYB55(2)<---------ANAC55(2)                  --------->CCA1(2)        <---------MYB46(3)--------->ANAC55(2)      <---------LBD16                      --------->MYB111(1)    --------->ICU4      ----------->RAV1(2)       <---------ANAC46             --------->ANAC58 ------>ANAC58    <---------GLK1(1)       <--------P         --------->ANAC58 ------>ANAC58   <---------ARR14(2)       <---------MYB55(1) --------->ANAC55(1)  ---------->DOF2 <-- ----->DOF2      --------->ARR14(2)------->TEIL      <---------ZAT6  <---------YAB1         <--------   aagcaaacccctgaacttggatatgagtcaaatggtgtatgtgggtaggtgtatagtcttaacaagtaatgctcattgtgaacttgaagcaaaaataccc  13420500                                    --------->TOE2(3)                                  <---------TOE2(3)                              --------->TOE2(3)        --------->ARR14(2)            <---------YAB1    <----------DOF2          <---------ARR14(2)                      ------ -------ALFIN1                --------->TOE1(3)  ------>ZmHOX2a(2)                         <--------- ---GT1  --------->ICU4 <----------DOF2 <---------TOE2(3)------>ZmHOX2a(2)        <----------DOF2 ---   cctcactagtcactatgaaaccatgtctttaactttaacattaagttttgatctatggatcgtcgaatggatttataagttcaacttttgtttacaaata  13420600                                                                       <------ZmHOX2a(1)                                                                    <------ZmHOX2a(1)               -                                        <---------YAB1            --------->ALFIN1                ---                                      --------->YAB1          <---------ANAC58                    <--     <---------AHL20(2)       --------->AHL20(2) ----------->GT1<------NtERF2               --------- --->YAB1             <-----------GT1 <---------ICU4          <---------ANAC46           ----------->RAV1(1) ------AGL15     --------->AHL20(2)  <---------ATHB51         <---------ANAC58        ----------->GT1 -------->GT1    <---------AHL20(2)  --------->ICU4          <---------LBD16  ---------->DOF2   -----   tagttattttcttaagaatttttttaacaaaataaaacaattatgaacaataggtgaaaaaatggcgggaggaggaaacagaaaggaagggcaacaaagt  13420700                                                            <-----------GT1                                                         --------->GLK1(1)                                                         <---------GLK1(1)                                                        --------->ARR11(3)                                          ----------------->AGL1      <---------ARR11(3)                  ----------------->AG------------>CBF      --------->AHL20(1)                  ----------------->AGL2 ------->GAMYB                  <---------GLK1(2)       <---------ARR11(3) -------->ANAC46          ------->GAMYB   <-----------------AGL3 ------>MYB52(1)         --------->MYB46(3)<---------------AGL15 -------DOF5.7(2)        <---------MYB52(2)--------------->AGL15 ->DOF2  <---------AHL20(2)--------->MYB52(1) >>>>>>>>>>>>>AGL25       ------------>CBF  ------------ ---->DOF5.7(2)  --------->ANAC46         ----------------->AGL3  <---------ATHB12<-----------GT1 ---   taacggaatatataaaaaaacacaacaacgaacagattgtcttaaccaaaaatagaaagatttctccaatccatccaatatttgtttccctctcaatctc  13420800                                                                               --------->At4g35610                <----------DOF2                                           --------->GLK1(1)               --------->HSFB2a(1)                                        <---------GLK1(1)             <------ZmHOX2a(1)                                            --------->CCA1(2)   ------>ZmHOX2a(1)                                                     --------->ARR11(3) >CBF  <----------DOF2  <----------DOF2  *TSS                            <---------ARR11(3) --->ZmHOX2a(1)<---------HSFB2a(1)     ----------->RAV1(1)           ---------->DOF2              ---   ctctcctctcttttaggactttccctctttcttcaaacatacaacagattaacaaatagaaaacgaagcacaaaagatatcagaagaagagagaagtctc  13420900                                    ---------->DOF2                               ---------->DOF2           <---------GLK1(2)                         ---------->DOF2              --------->DAG2             <-------TEIL        ------------------------>ANAC81              ---------->DOF2          <---------ANAC46       ------------------------>ANAC81  --------->ARR11(3)                    <---------ANAC58 --->ZmHOX2a(1)   ------------------------>ANAC81--------->ZAT18              <---------ANAC58     --   ctcccaaaaaaaccaaaaaaaaaaaaaaaaagagaaagaaaagaactcgagtgcaaaaagcttctctcttccttcccatggggtgcatttgaactaatct  13421000                                                                                    --------->ARR14(2)                                                                                    --------->GLK1(2)                          <---------YAB1                                            <---------ARR14(2)                       <---------YAB1                                         --------->DAG2                     ----------->GT1                                      <---------------AGL15                    <---------WOX13(1)                                   ------->GAMYB                  --------->ATHB12                                       ----------------->AGL3              --------->ATHB12                                           ============================            <----------DOF2                                            -------->P  <---------GLK1(2)           <---------ANAC58                               <---------AHL20(2) ---------->DOF2           <---------ANAC58                               <---------YAB1 ----------------->AGL2 ---->ZmHOX2a(1)<---------WOX13(1)                 <---------MYB52(1)--------->MYB46(3)   cctccttgaaatcgcttgattgattgttataaatcgattaatcgattcaaaccgttggatattattccaaaacaacccaaaaagagaatcccatgggaag  13421100                                 ---------->DOF2                              --------->HSFB2a(2)      <---------ALFIN1                              <---------HSFB2a(2)     <------NtERF2          <------NtERF2    <----------DOF2----------->GT1         ------>NtERF2  --------------->AGL15        ----------->RAV1(1)       ---------->ID1  <-----------------AGL3        ------>NtERF2                     ------>ZmHOX2a(1)     <---------ANAC58  <-----------------AG<---------MYB52(1)--------->YAB1    ------>ZmHOX2a(1)     <---------ANAC58  <-----------------AGL1       ----------->HVH21     --------->HSFB2a(1) =======================================MADS_MADS   <----------ID1        <---------HSFB2a(1)  <-----   ttgtgtttcgtcgccattgaaaggctctccttttggaaagagaccggtaagaaggcgacacagtagtaatagcagaacatcctctgttcctcgtttcgat  13421200                                           --------->LBD16                                           ------>NtERF2                                        --------->ZAT2                                        <---------ZAT2                                       --------->ANAC58                                       --------->ANAC46                                       --------->ANAC58                                       ------>MYB46(1)                                     --------->AtMYB61                                     <---------ALFIN1                                     ---------->DOF2                                   ------>NtERF2                     <---------WOX13(1)------>MYB83                --------->LBD16   --------->RAP2.6(2)               --------->LBD16 --------->ANAC58             --------->ARR14(2)              <---------LBD16  --------->ANAC46             --------->MYB52(1)         --------->ATHB12              --------->HSFB2a(2)<---------MYB55(2)         <---------ARR14(2)        <---------YAB1          <----------DOF2      --------->ANAC58      --------->LBD16                --------->YAB1  -         <---------ICU4    <-----------GT1--------->RAP2.6(2)              <-----------GT1      ----- ----GLK1(2)  <---------HSFB2a(2)--------->MYB46(3) --------->LBD16     <---------GLK1(1)   <--------   tcttcaactaatctttcccggagattgattttccagccaccaagccgcgttctccccgagcctatcggtgatggaattcacctcaagtatgatttgggaa  13421300  Previous    Next  AGI:  At2g31490.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK96039.1) Range:  from: 13419060    to: 13420323    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g31500.1    Description:  CPK24 (calcium-dependent protein kinase 24); calmodulin-dependent protein kinase/ kinase. similar to CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT5G19450.1); similar to CDPK19 (CALCIUM-DEPENDENT PROTEIN KINASE 19), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT5G19450.2); similar to CPK32 (CALCIUM-DEPENDENT PROTEIN KINASE 32), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT3G57530.1); similar to calcium-dependent protein kinase 2 [Petunia inflata] (GB:AAZ76711.1); similar to unnamed protein product [Vitis vinife Range:  from: 13420841    to: 13423613    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version