Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <---------ARR11(3)                                                                                --------->ARR11(3)                                                                                --------->GLK1(2)              <---------AHL20(2)                                     --------->ICU4              --------->ATHB51                                      <---------AHL20(1)              <---------ICU4                           --------->ARR14(2)       <-----------ARR10              --------->AHL20(2)               <---------ICU4       <---------AHL20(2)              --------->ATHB12                 --------->ATHB51    --------->YAB1          <---------AHL20(2)                   --------->AHL20(2)--------->AHL20(2)       ----------->GT1                         <---------AHL20(2)--------->AHL20(1)       --------->YAB1      <---------TOE1(3)                       --------->ICU4     <---------AHL20(1)       --------->TOE2(3)      <---------TOE2(3)                    <---------AHL20(2)   --------->YAB1 --------->RVE1(1)     ---------->DOF2                    ----------->GT1<---------ARR14(2)    --------->AHL20(2)  --------->TOE2(3)--------->At4g35610 --------->DAG2  --------->ARR11(3)--------->AHL20(2) -------GT1  --------->ICU4           ---------->DOF2  <---------ARR11(3)<---------AHL20(2)       ---   acttcattaaagttaattatttgctgaaaaaaaaaaaaaaaaaagttaattatttagtatcttcaaatataatatttaaaaaaatctagccatcttaatg  13418700                --------->ANAC46                --------->ANAC58                --------->ANAC58               -------->P               ------>MYB83               ------>MYB46(1)              ------>ZmHOX2a(1)                                    --------->AHL20(1)          --------->ARR14(2)                                       <---------AHL20(2)          <---------ARR14(2)                                       <---------AHL20(1)          <---------ARR11(3)                           <---------YAB1          ----------->GT1      --------->YAB1                      ---------->DOF2         --------->YAB1    <---------TOE2(3)                  --------->AHL20(2)         --------->AHL20(2) <---------AHL20(2)                    <---------AHL20(2)         <---------AHL20(2)               -- --------->AHL20(2)                   --------->AHL20(2)      --------->AHL20(2)                 <--- ---->TEIL--------->GLK1(2) ---------->DOF2--------->DAG2     <---------AHL20(2)   <---------AHL20(2)   cattttaatgaaaatcctacccaagttttttaaaggtcaatttaaaaagtatcagttttgatttttaattatattcaatatttgttaaattttgtttcat  13418800                                               <----------DOF2                                              ------>ZmHOX2a(2)                                             <---------RVE1(1)                                             <------ZmHOX2a(2)                                            --------->ARR14(2)                                            <---------ARR11(3)                                            <---------ARR14(2)                                            --------->ARR11(3)                                            <---------AGP1                                   --------->AHL20(2)     <---------TOE2(3)                           =========================HOX2a_HOX2a                           <----------DOF2                           ------>ZmHOX2a(1)--------->AGP1--------->DAG2               --------->GLK1(2)   <---------YAB1          ==========================HOX2a_HOX2a                 --------->DAG2    -- ------->TOE2(3)          --------->TOE2(3)<---------CCA1(2) <--------P         ---------->DOF2    <- ------TOE2(2)   --------->GLK1(2) <---------AHL20(2)   ---------->DOF2  <-----------RAV1(1)     <---   atgttaatattaaaaacacaatctatttcctaaacatttatatacagatcttttttaaaaaaggttagtcaaaaactgttggaaaagctaatcttttttt  13418900                             <----------DOF2                       --------->ANAC55(2)                       --------->ANAC55(1)                       --------->ANAC58                       <---------ANAC55(2)                   <---------ANAC46          ----------------------->TaNAC69(2)      --------------------->WRI1      ----------->GT1  --------->ANAC58           <----------DOF2   --------->YAB1      --------->ANAC46          <---------ANAC58 ------------->AGL15  <-------TEIL   <----------DOF2      <----------DOF2                       <---- --------------AGL15<---------ARR14(2)           <---------ANAC58                            <------- --------GT1        --------->ARR14(2)  --------->TOE2(3)<----------DOF2<----------DOF2      --------   aacaaaaatagtaaaatactcatatacgtaactttgggcctttcttaaatggctttgggcctttcgtaaatgggcttatgggcttaagtacttcaaatct  13419000                                                            *TSS                                                           ------->GAMYB                                                           --------->AtMYB61                                                           ----------->RAV1(1)                                                          <---------MYB55(2)                                                          --------->MYB46(3)                                                         ------>MYB46(1)                                                         -------->P                                                         ------>MYB83                                                       --------->MYB46(3)                                                       --------->AtMYB61                                                      --------->MYB46(3)                                                   --------->WRKY12                          --------------->AGL15    ----------->HVH21 ------>NtERF2                          <---------------AGL15    --------->WRKY38(1)                 ----------->RAV1(1)             <---------At4g35610 <-----------HVH21       <------MYB46(1)   <-----------------AGL3  --------->At4g35610----------->HVH21       <------MYB83      ============================================================================       ----------->GT1  ------------>CBF         --------->ZAT2    <------NtERF2                  <-- -----YAB1      <----------ID1               ------>ZmHOX2a(2)     <---------ANAC46   <-------------- --ARR14(2) <------------CBF                <------ZmHOX2a(2)     <---------LBD16     --------------- ->ARR14(2)--------->ATHB12  <---------AHL20(2)  <---------ZAT2<-----------HVH21  --------->MYB46(3)   gatagtatttggtttattgcaacaaaaacaataaatggaaatagcgatctgagctgaccaaccacagtcgcggacagagctaaaaccaccatttgaagaa  13419100                                                                                                 ----                                                                                     ------>ZmHOX2a(2)                                                                                    --------->GLK1(1)                                                                                    <---------At4g35610                                                                                    <------ZmHOX2a(2)                                                                                   --------->ARR14(3)                                                                                   <---------ARR14(3)                                                                                   --------->ARR11(3)                                                                                   <---------ARR14(2)                                                                                   --------->ARR14(2)                                                                                   <---------ARR11(3)                        ---------->DOF2                                    =================HOX2a_HOX2a    >>>>>>>>>TBF1     ----------->HVH21       ------------------------>ANAC81 --------->ALFIN1   ---- =MADS_MADS     --------->ARR14(2)    --------->ALFIN1                     <------ZmHOX2a(1)     <--- ----ZmHOX2a(1) <---------ARR14(2) <---------MYB46(3)                      ================HOX2a_HOX2a -AGL15      <---------------------WRI1    <------ZmHOX2a(1)       <-------TEIL   <---------GLK1(1) >AGL15>>>>>>>>>TBF1<---------ANAC46<---------ANAC46<---------MYB52(2)  --------->HSFB2a(2)     <----   ggagaagaagaagaagacgattcggtgaaagcgaagatgggtggaggaatggaaacgaacaagaacaagttcatcgaggactggggatctgctagagaga  13419200                                                                                                    <                                                         <------NtERF2        <---------REM1(2)     <                                                <---------HSFB2a(1)         --------->ETT(2)        <                                                --------->HSFC1(2)          <---------ETT(2)        <                                                --------->HSFB2a(1)   --------->ATHB12          <----           <---------ARR14(2)                   <---------HSFC1(2)    <---------ICU4            -----           --------->ARR14(2)<-----------ARR10 --------->ARR14(2)     --------->YAB1        --------- ----->GLK1(2)    --------->ZAT14              <---------ARR14(2)    <---------YAB1      <-----------HVH21 ----->ARR14(2)<---------At4g35610             --------->GLK1(2)     <---------ATHB12    --------->TOE2(3) ------ARR14(2)--------->At4g35610            <---------GLK1(2)      <------ZmHOX2a(2)--------->ARR14(2) -----GLK1(2)  --------->LBD16            --------->At4g35610     --------->LBD16     <---------ARR14(2)   atctcgagcacaatttccgctggactcgtcgtaacttcgctctcatcggaatcttcggcatcgctctcccgatcattgtctacaagggaatcgtcaaaga  13419300                                                                        --------->ARR11(3)                                                                       --------->GLK1(1)                                                                       <---------GLK1(1)                                                                       --------->RVE1(1)                                                                      --------->ARR11(3)                                                                      <---------ARR11(3)                                                                    --------->MYB59  <---------MYB52(1)                                          --------->LBD16 ---------ANAC58                                        --------->HSFB2a(1)        <---------ZAT18 ---------ANAC55(2)                            <---------AtLEC2--------->LBD16     --------->ZAT18 ---------ANAC46                         ------>ZmHOX2a(1) ------>ZmHOX2a(1)    <---------ANAC58 ---------ANAC58                      ============================HOX2a_HOX2a   <---------ANAC58 -----ARR11(3)                        <------ZmHOX2a(2)<-----------ARR10<---------ARR11(3) ---->ARR11(3)       --------->ZAT6  --------->ARR14(2)<---------ARR14(2)      --------------->AtSPL8 ->DOF2 --------->AHL20(2)        <---------HSFB2a(2)  --------->ARR14(2)    <---------MYB52(1)     -   tttcgtgagtttaaatctctctatctctatctcattctcgatcctatttgcatttcgaatcctcccgagttagatatctgttttgtgccctaatttttca  13419400                                                                                                   <-                                                                                                   --   <---------SPL7                                                                            --------  <---------ANAC58                                          <-------TEIL                    ---------  <---------ANAC46                                 --------->At4g35610               <---------At4g35610  <---------ANAC58       <-------TEIL              <---------At4g35610               --------->At4g35610 ------>TEIL     ------>ZmHOX2a(2)         <---------AHL20(2) ------->TEIL       <----------DOF2   <-   tgtatcgtatggaattggatcgtttgatacatttgaaattggggtttaattttagctgtagatgcatttgaattagattagttcttttgctgcaacgatt  13419500                                                                                                 ----     --------->ARR14(2)                                                                         -----     <---------ARR14(2)                                                                         ----- --------GLK1(2)                                     <---------MYB46(3)                        ------ ------->ARR14(2)     <-----------GT1               <---------YAB1        <---------YAB1     -------- ->ATHB12   <---------GLK1(1)                    --------->ICU4         --------->YAB1   <---------HSFB2a(2) >ICU4      --------->GLK1(1)                    <---------YAB1        <---------YAB1    --------->HSFB2a(2) --------ARR14(2)   <-----------GT1         --------->ANAC55(2)    <---------WOX13(1) <-----------GT1   ggattcggaactggatttcaattttcacctccatactagtattcttaggtgatgatggttcgatttcagattgattataactcaaaattttcgagaccga  13419600  Previous    Next  AGI:  At2g31490.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK96039.1) Range:  from: 13419060    to: 13420323    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version