Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    --------------->AtSPL8                 <---------ANAC46        <---------------AGL15        --------------->AGL15                                                         --------->ANAC55(2)       ----------------->AGL2                                                    ----------->GT1       <-----------------AGL2                                               --------->ZAT2       <-----------------AGL1                                            <---------ANAC46       --------->ANAC58                                                  <---------ANAC58       <-----------------AG                                              <---------ANAC58       --------->ANAC58                       <---------TOE2(3)          <---------ANAC55(2)       ----------------->AG                   <---------TOE1(2)          --------->ANAC55(2)    --------->KAN4(2)                         <---------TOE2(2)  <------ZmHOX2a(1)    <---------ANAC55(2)   --------->YAB1<---------ANAC58     <---------ANAC58         <---------TOE2(3) <---------ZAT6  <------ZmHOX2a(2)          --------->ARR14(2)                <---------TOE1(3)<---------TOE1(3) <---------ARR11(3)          <---------ARR14(2)          <---------TOE1(3)  <---------ZAT2     ------ --------->ARR11(3)   ------->TEIL    <---------ANAC58   <---------TOE2(3)--------->LBD16     ------- ------ZmHOX2a(1)<---------ANAC58------>ZmHOX2a(1)       --------->DAG2 <-----------------------TaNAC69(2)   taggatcatacccaaaatggcttgtaccccaaatcctcttccttgtcttaggttttggtaaggttaaggattgtcccgtgctagggttacatatcgccga  13415300                              ------>ZmHOX2a(2)                             <------ZmHOX2a(2)                       --------->YAB1                            --------->ARR11(3)                      ----------->GT1                            <---------ARR14(2)                   <------ZmHOX2a(1)     <---------LBD16        --------->AGP1                <------NtERF2       ---------->DOF2   --------->GLK1(2)        <---------AGP1   ---------->DOF2 <---------MYB52(1)                  <---  <---------GLK1(2)         --------->ARR14(2)           ------>NtERF2      <---------YAB1---------->DOF2 >NtERF2                    <---------ARR11(3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) --------->MYB46(3) -->DEAR3(1)          <----------DOF2<---------CCA1(2) <---------ABI4(2)--------->YAB1--------->AtMYB61   gacaaattctggagttttccttccctttaagatctgttcatatctaacaaagacaaggccaccgataggactgataatattaaagcgaccatcaaaggga  13415400                                                                     >>>>>>>>>TBF1                                                               <---------HSFB2a(2)                                                               --------->HSFB2a(2)                     --------->MYB52(1)                       <---------ANAC46                     ---------->DOF2                         <-----------------------TaNAC69(2)                  <---------At4g35610                      --------->ALFIN1                  --------->At4g35610      <------ZmHOX2a(1) <------NtERF2                  <---------ZAT2          <---------YAB1 <---------bZIP60(2) ------KAN4(2)    <------NtERF2 --------->ZAT2          <---------AtMYB61                    <-------   attttcatatgaaaactggcagctaaaggagacgagctctcattaggattatgaggctgaggtgtcgagaagaagaacaactctctgtgtttttggcagg  13415500                              <<<<<<<<<<WRKY38                              <<<<<<<<<<WRKY26                                                  -----                            <------MYB46(1)                                                  ------->GAMYB                            <------MYB83                      <---------ANAC46              ---------                           --------->MYB59                <---------LBD16                   ---------                         --------->CCA1(2)               <------MYB83                  --------->ANAC55(2)                         --------->ARR14(1)              <------MYB46(1)               <---------ANAC55(2)                        --------->ARR14(2)              --------->MYB111(2)            --------->ANAC58                        --------->ARR11(1)              --------->MYB111(1)            --------->ANAC46                        <---------ARR14(2)              --------->MYB46(2)             --------->ANAC58                        <---------ARR11(3)  --------->LBD16  <------NtERF2             --------->ANAC55(1)                        --------->ARR11(3) <---------ANAC46 --------->LBD16       ----------->ARR10              <---------ANAC58<<<<<<<<<<WRKY43          <---------DEAR3(1)      <----------DOF2 <---- ----RAV1(2)  <---------ANAC58--------->WRKY18(1)      <--------P          ---------->DOF2--------->MYB52(1)   cgaacaagagcctcgggcgagcacaagatttggtcaagtacaactccgtgaaatagggtaggcggagtatggaggcccaaagctttgatacgcaacgaca  13415600                               <---------ARR11(3)                                       <<<<<<<<<<MYB80                   ------>NtERF2                                        <-----------HVH21                  --------->DEAR3(1)                      ----------->GT1              <------MYB46(1)                  ----------->HVH21           <------ZmHOX2a(2)        <---------ANAC58<---------MYB46(3)           --------->ZAT14     --------->ARR11(3)         <---------MYB46(3)<---------ANAC58 ---->ARR11(3)  --------->ANAC46             <---------ARR11(3)        <---------ANAC58<------MYB83 >ANAC58   <---------ZAT14     <---------ARR14(2)         <------MYB46(1)   <---------ANAC46        < >ANAC58  <-----------HVH21   --------->RVE1(1)          <---------AtMYB61  <---------ANAC58    ----- -----ARR11(3)<-----------RAV1(2)      <---------DOF5.7(2)<------MYB83<---------------------WRI1-----   tcttgctatagacttcacaggcgaccttgagaatatctcgataacgagatcaattgggattggttcaaagttttcgtcgcgtccaaggatggtttgtcga  13415700                    <---------MYB52(1)                ------>NtERF2         --------->GLK1(2)        <---------GLK1(2)   <-----------RAV1(1)                                             ---------  ----------->HVH21--------->LBD16                                                --------->AHL20(2) --------->ANAC58  --------->At5g28300            <---------HSFB2a(2)           ----------->GT1 --------->ANAC58<------NtERF2                    --------->HSFB2a(2)          --------->DAG2 ---------LBD16<---------ETT(2)                <----------DOF2        ----------->GT1      ---------- ---->ANAC58 <-----------HVH21             <---------GLK1(2)          <---------ZAT6    ----------->TBP ---->ANAC58<-----------RAV1(1)         --------->YAB1    --------->CCA1(2)   ---------->DOF2--------   gccacggacacattctgtcgccgtgatttcatgttgcagtaatcaaattcttttggaacgatatgaagaatagggttagaaaaagtaaatataaaaagtg  13415800                                               --------->YAB1                              <---------ANAC46                                               <---------ICU4                              <---------ANAC58                    <-----------GT1     <------ZmHOX2a(1)                                --------->ZAT14                 <---------YAB1       <---------TOE2(2)                       <-----------TBP -------              <---------MYB52(1)      <---------TOE1(2)                       <---------AHL20(2)-----            ----------->GT1          <-----------RAV1(2)                    <---------AHL20(2)-------       <---------AtLEC2              <------NtERF2                        <-----------TBP--------->ZAT18       <---------ANAC46             ------>NtERF2               ----------->GT1          <---------ZAT14       <---------ANAC58         --------->ANAC58               <---------TOE2(3)        --------->ALFIN1       <---------ANAC58         --------->ANAC46         --------->AHL20(2) --------->AHL20(2)<------ >DAG2 <---------ANAC55(1)      --------->ANAC58 <---------YAB1--------->DAG2 --------->AHL20(2)<---- >DOF2 --------->ANAC55(2)--------->AHL20(2)  <---------YAB1 ---------->DOF2<-----------TBP<---------ANAC58 --->GT1    <---------ANAC46    <---------DEAR3(1)       --------->YAB1   --------->AHL20(2) --------   atatagtttgcgtgtcgttatttttccattaaacacggcgcaggatttatcatgactaataaaaaaaggttaacatatatatatatacaagtggagtgga  13415900     --------->ANAC55(2)     <---------ANAC55(2)     --------->ANAC58     --------->ANAC55(1)     --------->ANAC58     --------->ANAC46    <---------LBD16    --------->RAP2.6(3)   <-----------GT1                                                                        --------->ATHB12   --------->MYB52(1)                                                                     <---------ICU4 -->ZAT14                  <---------TOE2(3)                  <---------DAG2             --------->ICU4 ------>GT1          <---------YAB1                           <----------DOF2            <---------YAB1 -->ZAT18          <---------ICU4                          <-----------GT1             <---------ICU4 ---ZAT14          --------->YAB1                   ----------->GT1   ----------->HVH21--------->YAB1 -----ANAC46      <---------YAB1             <---------At4g35610    --------->TOE2(3) <---------YAB1 ->ALFIN1       --------->YAB1               --------->At4g35610  <---------YAB1  <---------GLK1(2)   gtaaatcacggcacatatttatcatgactaatgaaaaaatttgatacagcagaatagtttataactttatccttgacattagaagattatcatgatttca  13416000                 --------->YAB1                --------->ICU4                <---------YAB1                                 --------->ALFIN1              --------->YAB1                                <---------TOE2(2)            <-------GAMYB                         --------->YAB1           ----------->GT1                       <---------ATHB12 ----------->GT1        ------------>AtMYB77                <---------At4g35610<---------REM1(1)        ----------->GT1       <---------YAB1                  --------->ANAC58     <---------TOE1(2)     --------->YAB1       ----------->HVH21               --------->ANAC58    ------>ZmHOX2a(1)   --------->YAB1     --------->YAB1                 --------->STY1(2) <----------DOF2         --------->ICU4       --     <---------ICU4               ------>ZmHOX2a(1)  <---------ICU4       --------->AHL20(2)       <-   tctcgactcatgacagttataatgaaacaagtgctcctagcaagacagcaaatcatctttcctaggtgtagcaaaaaaaaatgatcagaattgaaacaag  13416100                                                                                                    -                                 ------>ZmHOX2a(2)                                                  -                               <---------ARR11(3)                                                  --                           <---------ANAC58                   ---------->DOF2                    ----               <----------DOF2 --------->ARR11(3)     ---------->DOF2                         ------- ------->KAN4(1)           <---------ANAC58       <----------ID1       <----------DOF2        <------ --------KAN4(1)      --------->YAB1        <---------YAB1<----------ID1                 ------->GAMYB   aacaatccatccctctgctttgaagcatagcttgatcttatgaaatatgaaaacaacaaagagaaaaagactcctttcaaatagaacataaccccatata  13416200  Previous    Next  AGI:  At2g31470.1    Description:  F-box family protein. similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G65850.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60954.1); contains InterPro domain F-box associated type 3 (InterPro:IPR013187); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 13414569    to: 13415732    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g31480.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G05894.1) Range:  from: 13416055    to: 13418076    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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