Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        --------->ANAC46              --------->YAB1                                                          <----------ID1 --------->GLK1(1)                ---------->DOF2                             --------->CCA1(2) ---------ARR11(3)               ------>ZmHOX2a(1)           <---------AHL20(2)   --------->CCA1(2) -------->ARR11(3)        --------->ZAT14                  <---------AHL20(2)--------->ARR11(3) -------TOE1(3)           <---------ZAT18                  --------->AHL20(2)<---------ARR11(3) -------TOE2(3)           --------->ZAT18           <---------MYB46(3) ------>ZmHOX2a(1)  ---------->DOF2   aagatttctaatgctatagtcactcttgttcactcctaaagtctatgtcgatgtttgttatatatatatgttcctccaagatatatatgcgccaaagcct  13404300                                                                                           ----------                      --------->GLK1(2)                                             --------->ARR14(2)                  --------->YAB1                                                    <---------ARR14(2)      ---------->DOF2<---------GLK1(2)         <----------TaMYB80                   --------->ARR11(3)     <---------AHL20(2)                      --------->YAB1                         <---------ARR11(3)     --------->AHL20(2)                <------NtERF2                         ----------->GT1       --   tggacaattaaagactcaaataagaatcgctgatttcagtcggagactcatattccctccaaaaatgtttttttttttttggtgaatatctccaaaagta  13404400                               <---------YAB1                              <------------CBF                             -------->HAHB4                             <---------ICU4                             <---------AHL20(2)                                                   <--                             -------->ATHB1                                                   <------                             --------->ATHB51                                                <-------                             --------->ATHB12                                               <--------                            <---------ATHB51                                              <---------ICU4                            --------->ICU4                                                --------->ATHB51                            <---------YAB1                                                <--------HAHB4                --------->AHL20(2)                                     <---------GLK1(2)  -------->ATHB1               --------->AHL20(2)    <---------YAB1                   <------ZmHOX2a(1)   --------->YAB1           <-------TEIL   --------->YAB1                            <---------TOE1(3)    <---------YAB1          <--------P    <---------MYB52(1)  <---------At5g28300     <---------TOE2(3)    --------->ICU4 >DOF2<-----------RAV1(2)--------->AHL20(2)<-----------GT1    --------->AHL20(2)         <---------ATHB51 ------->TOE2(3)<---------AHL20(2) <-----------GT1      --------->AtLEC2             ------------>CBF   ttcttaaaccaggttgatttaattccattaattattgttactattttactgtgctaccattcaaatatttaaggaatctcatccatagacaattattacc  13404500                                            <---------RVE1(1)                               <----------DOF2                           <---------AHL20(2)                              ------>ZmHOX2a(2)                          --------->AHL20(2)                             <------ZmHOX2a(2)                    <-------TEIL                            --------->ARR14(3)                   --------->CCA1(2)                            <---------ARR14(3)           --------->AHL20(2)          --------->WOX13(1)--------->ARR11(3)          --------->AHL20(2)   <-----------GT1          --------->AGP1 <---------ARR11(3)   <---------ARR14(2)  <-----------GT1           <---------ARR14(2)      --------->AHL20(2)------->MYC3 -------MYB52(1)            <---------ARR11(3)      <---------AHL20(2)<-------MYC3 ---At5g28300       ----------->TBP        --------->ARR11(3)   --------->ARR14(2)  ------------>CBF ----GT1------------>CBF    --------->ARR14(2)<---------AHL20(2)--------->ARR11(3) <-----------------AGL2 -YAB1<----------DOF2     ----------->ARR10<---------GLK1(2)---------->DOF2        <-----------------AGL1   gtttttaactttcaatctaactataaataagatctttgaaacacagatttttttttaaataaaaaagatacacgtttaatttgtgtctcaatatggccac  13404600                                                                                       <---------ARR14(2)                                                                                    <---------ANAC46                                                                               ---------->DOF2                                                                              ------->GAMYB                                                                             --------->MYB46(3)                                     <---------YAB1                          <---------MYB55(2)                                  <---------YAB1                            --------->ANAC58                               --------->ICU4                               ------>MYB83                               <---------MYB52(1) <---------AtLEC2          ------>MYB46(1)                            ---------->ID1  <----------DOF2                 -------->P --------->ARR14(2)                       <----------DOF2      <---------DAG2                  --------->ANAC58       <-               --------->AHL20(2) --------->ICU4<-----------GT1    ------------>CBF <---------ANAC55(2)   gatgctaaaaaaacacataaattttctttcgtcgttattattagtgctttttgcatttccaaaatcaaatgcaatgccaaccaaagacgtatacagtctt  13404700                                                                  --------->TGA1a                                                                  --------->ANAC58                                                                  --------->ANAC46                  -                                                                  --------->ANAC58                 --                                                                  <---------TGA1a                  --                                                 --------->MYB52(1)                               ---                                         <-----------HVH21      <---------ALFIN1                  <--                          <---------AtLEC2 --------->ETT(1)    <---------SPL7----------->HVH21  <----         --------->At4g35610       --------->ATHB12           --------->DEAR3(1)             <------- --------AtLEC2     <---------GLK1(1)  <---------MYB46(3)    --------->ATERF1(1)        <---------AHL20(2)   tgcaaggagtcgtctgaagtagatttctgcatgaaaaacattgggtcggacaaacgtatagtagccgcacgcgacttctatgacatatttttaatcgcgg  13404800                                                        --------->GLK1(1)       ----------->GT1                          -------->HAHB4 <---------MYB52(1)                            --------->ICU4                                -------- -------->TOE2(3)                            <---------ICU4                              --------->HSFB2a(1) ------->ANAC58                              --------->YAB1                              --------->HSFC1(2) ------->ANAC58               <---------MYB52(1)<---------ICU4   ----------->GT1         <---------HSFC1(2) ------>SPL7       <-----------GT1          --------->AHL20(2)  --------->ALFIN1         <---------HSFB2a(1) -----TEIL      ----------->GT1             <---------AHL20(2) ------->MYC3        ---------->DOF2 <- -----SPL7     <---------TOE2(3)           <---------AHL20(2)  <-------MYC3  <------ZmHOX2a(1)    --- --LBD16    <---------YAB1<-----------GT1 --------->YAB1<---------GLK1(1)--------->TOE1(2)   --------   tacgttagatagttactaatgtaacaattttcgttttttttttatattaattatgcagaaatccatgtggtagaaactaggaataaaaagaattttcgta  13404900                                                        --------->YAB1            --------->ANAC46                           <---------ATHB12            --------->ANAC58                          ------>MYB46(1)            --------->ANAC58                          ------>MYB83           <---------TOE1(3)                         --------->WOX13(1)           <---------TOE2(3)                       --------->MYB46(3)          --------->MYB52(1)                  --------->YAB1      <---------ARR11(3)                   <---------ICU4      --------->ARR11(3)                   --------->YAB1  --------->YAB1         <---------AHL20(2)--------->ATHB51 ->ANAC55(2)--------->ANAC55(2)           <---------AHL20(2)       --------->TOE2(3) --------ICU4           --------->AHL20(2)<---------ATHB51    --------->AHL20(2) ------>ICU4<---------ANAC55(2)<---------TOE2(3) <-----------GT1  ----------->GT1  --------->ICU4 ->YAB1 ------>ZmHOX2a(2)--------->AHL20(2)<--------ATHB1 ---------->DOF2     ----------->GT1       <   atattgatgatctaacgtaacttagatttaattaagaaaactgaataattgtaaccaatcaaaagtaaatgttaaacaaatcgcaaatattagattagaa  13405000                                                                                                   --                                                                                                   <-                                                         <----------ID1                            --                                                     <---------AHL20(2) <---------AHL20(1)        ---                                                <---------AHL20(2)      --------->AHL20(2)     ------                                                --------->AHL20(2)   --------->YAB1            ------                                    >>>>>>>>>MYB98  --------->AHL20(2)  <---------AHL20(2)     <-----                      <------ZmHOX2a(2)      --------->AHL20(1)      --------->AHL20(2)        <-----            ------>ZmHOX2a(1)     <-----------GT1   <---------AHL20(2)  --------->AHL20(1)    -------         <-----------GT1  --------->AtLEC2   <---------AHL20(1) --------->AHL20(2)          --------- -------TEIL=================HOX2a_HOX2a--------->AHL20(2)    ----------->GT1       <---------ICU4<--   gatgcaaatatttcctctacttcgatccatgcatatttaacatataatatataaataaatcgacaagttaataatattttagaaaatcatttttcattaa  13405100        <------ZmHOX2a(1)   <-----------GT1                   <---------------AtSPL8 ------->AHL20(1)              --------->ANAC58 --------AHL20(2)              --------->ANAC58      --------->AHL20(2) ------->AHL20(2)              ----------->GT1       <---------AHL20(2) ------>AHL20(2)             --------->YAB1          --------->AHL20(1)                       ------- --->AHL20(2)             --------->WOX13(1)   --------->ANAC46                              -------- --->AHL20(1)           <---------YAB1   --------->ZAT18            --------->At4g35610--------->AHL20(2) ----AHL20(2)        <---------AHL20(2)  <---------ZAT18            <---------ZAT2    --------->AHL20(2) ----AHL20(1)  --------->AHL20(2)    --------------->AtSPL8         <---------At4g35610<---------AHL20(2) -->AHL20(2)   <---------AHL20(2)--------->AHL20(2)  <---------AHL20(1)               <---------AHL20(1) >TOE2(3)     --------->YAB1<---------ATHB12--------->ANAC46        --------->ZAT2    <---------AHL20(2) -------AHL20(2)    --------->AHL20(2)  <-----------GT1    <---------YAB1         <---------AHL20(2)<   attaattacaggactattaaaattttatcaatcaagaaaatagtaccctacacaataaattttgatatagagctgagttttgttttaatttaattttggt  13405200  Previous    Next  AGI:  At2g31430.1    Description:  invertase/pectin methylesterase inhibitor family protein. similar to enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] (TAIR:AT2G31425.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN69355.1); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 13403269    to: 13404239    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g31432.1    Description:  enzyme inhibitor/ pectinesterase. similar to enzyme inhibitor/ pectinesterase [Arabidopsis thaliana] (TAIR:AT2G31425.1); contains InterPro domain Pectinesterase inhibitor; (InterPro:IPR006501) Range:  from: 13404674    to: 13405916    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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