Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                     --------------->AtSPL8                                                <---------DAG2              <---------HSFB2a(2)                                                          --------->TOE1(3)              --------->HSFB2a(2)                     <---------At4g35610        ------>ZmHOX2a(1)            --------->At4g35610                ------>ZmHOX2a(1)           <<<<<<<<<TBF1   --------->TOE2(3)   tgggatttgtaatcttctgcaacttagtaccagttctcaaaacattctccttcttccgcttctctctctcttccttcttcttcctcttctcaaccttatt  13399500                                                                                         ------>ZmHOX2a(1)                                                                                         ============                                                                                         ============                                                                                       <---------ANAC58                                                                                       <---------ANAC58                                                                                ================HOX2a_HOX2a                                                                                ------>ZmHOX2a(2)                                                                               =================HOX2a_HOX2a                                                                               --------->CCA1(2)                                                                               <------ZmHOX2a(2)                                                                              <---------ARR14(2)                                                                              <---------ARR11(3)                                                                              --------->ARR11(3)                                                                              <---------ARR14(3)                                                                              --------->ARR14(3)                                                                              --------->ARR14(2)                                                                              <---------AGP1                                                                              --------->AGP1                         <---------At5g28300                                 <---------CCA1(2)                 <---------ZAT2              --------->YAB1                --------->HSFB2a(2)                 --------->At4g35610         --------->TOE2(3)           ------>ZmHOX2a(1)                 <---------At4g35610      <----------DOF2                ==============HOX2a_HOX2a  ------>ZmHOX2a(1)     <-----------GT1--------->ANAC46             <---------At4g35610<---------ANAC46 -------GT1  <-----------HVH21    ------>ZmHOX2a(1)     <----------DOF2  =============HOX2a_HOX2a   actcctaatctcttccttcagctcattcaccctctccttatacgctttcttaatctccctttgcctcttcatctcctccagatctggtttcctgttcttc  13399600                              <---------MYB46(3)               ------>ZmHOX2a(2)                                                 <------MYB83              <------ZmHOX2a(2)                      <----------DOF2             <------MYB46(1)              --------->CCA1(2)               --------->HSFB2a(2)               --------->MYB59             --------->AGP1 <---------At4g35610--------->LBD16                  <---------AtMYB61             <---------ARR11(3)              --------->SPL7                    <--------P             <---------ARR14(2)            <-----------HVH21           <-----------HVH21             <---------AGP1 <------NtERF2  <---------SPL7             --------->DEAR3(1)--------->ETT(2)             --------->ARR14(2)           <---------ANAC58 --------->LBD16   <------MYB83             --------->ARR11(3)           <---------ANAC46 ------>NtERF2     <------MYB46(1) <-------     ------>MYB46(1)      <---------RAP2.6(2)<---------LBD16<------NtERF2    <---------MYB46(3)     ------>MYB83        <---------LBD16  <---------ANAC58--------->LBD16   <---------TOE1(2)-------- =====================HOX2a_HOX2a      <---------ARR14(2) <---------LBD16   <---------TOE2(2)<------- ====================HOX2a_HOX2a       --------->ARR14(2)<---------LBD16  <---------SPL7<---------ETT(2)   acaaacctccctgaagatctatgagttcgcggctgtttccagttccgtccggagactttcccggcgattacaccgtcgtaggttggtctctcgacagcta  13399700                                     ------>NtERF2                                   <------NtERF2                                   --------->ZAT18                                   --------->RAP2.3(1)                                  <---------ERF1                                  ------>NtERF2                                  <---------ATERF1(1)                                  <---------DEAR4(2)                                  <---------RAP2.3(1)                                 --------->O2                                 <---------DEAR3(1)                                 --------->DEAR3(1)                                 <---------RAP2.3(3)                                 <---------O2                                                   <----                                --------->ATERF1(1)<-----------RAV1(2)                 <---------DEAR3(1)                               --------->MYB52(1) <------NtERF2                       <---------At4g35610                              ----------->HVH21 --------->ANAC46                   <-------TEIL <----                             --------->DEAR3(2)<---------LBD16                  --------->HSFC1(2)                          <------ZmHOX2a(1)   <---------ANAC58                  --------->At4g35610                       --------->At4g35610    <---------ANAC58                  <---------HSFB2a(1) <                       <---------At4g35610    <---------ANAC46                  <---------HSFC1(2)  < --At4g35610    <---------GLK1(2)<---------RAP2.3(2)     <------ZmHOX2a(1) --------->AtLEC2 <-------GAMYB ->At4g35610    --------->ARR14(2)<---------ORA47(2)   --------->ALFIN1  --------------------->WRI1<- --ZAT2         <---------ARR14(2)<---------RRTF1(1)  <------ZmHOX2a(1)  <---------AtLEC2  <---------MYB46(3)   gagcaataggtttgtctggattttcagaggaagcgacggcgctacgtttcgcggcaggaggagcaccatcgatgtccatggaagcttcatcggcgattgc  13399800        <---------ANAC58        <---------ANAC58        <---------ANAC46       <------NtERF2      ------>NtERF2      <---------RAP2.3(1)      <---------DEAR3(2)     <---------DEAR3(1)     <---------ANAC46     --------->DEAR3(1)     <---------RAP2.3(2)     <---------RAP2.6(2)    --------->ATERF1(1)    <------NtERF2    <---------At4g35610    --------->DREB2C(1)    <---------DREB2C(1)    --------->RAP2.3(1)    --------->DEAR4(2)   <---------ATERF1(1)   ------>NtERF2   <---------RAP2.6(1)   <---------ORA47(2)   <---------RRTF1(1)   <---------DEAR4(2)   <---------RAP2.3(1)   <---------ERF1  <---------RAP2.3(2)  --------->ATERF1(2)  <---------RRTF1(2)  <---------DEAR3(1)                                 --------->ARR14(2)  <---------RRTF1(3)           <---------ANAC58      <---------ARR11(1)  <---------ATERF1(2)          <---------ANAC46      --------->GLK1(2)  --------->DEAR3(1)           <---------ANAC58   --------->DEAR3(1)  <---------RAP2.3(3)     <----------DOF2        --------->RAP2.3(1)      <---------GLK1(1)  <---------RAP2.6(2) <-------TEIL               <------NtERF2       <------NtERF2 <---------At4g35610 --------->ARR14(1)         --------->LBD16 --------->ANAC58 --------->ATERF1(1) --------->CCA1(2)         <---------ATERF1(2)   --------->At4g35610 <---------LBD16     --------->GLK1(2)         --------->ATERF1(2)   <---------LBD16 <---------ABI4(1)  --------->ARR11(1)         --------->DEAR3(1)   --------->MYB52(1) -----ANAC58        --------->ARR14(2)        <---------RAP2.6(2) <---------ABI4(2)    --------->ANAC46 -----ANAC58      ----------->ARR10    <------MYB46(1)      <-----------HVH21          --------->ANAC58 ---------RAP2.3(1) <---------ARR14(2) <------MYB83  <---------ARR14(2)--------->LBD16 --------->ANAC58 ---------ATERF1(1) <---------GLK1(2) <---------TOE1(2)  ------>ZmHOX2a(1)--------->GLK1(1) --------DEAR3(1)<XXXXXXXXXXXXXXXXXXXXMIR2112-5P------>NtERF2   --------->ANAC58--------->ANAC46   ttcggcggcggcttgttcttgagattcgcgtttgcgtttgtaggttttgccgccgaatccttcgtcaaggcaccggaaatctacggtgcaagccatttct  13399900                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                   --                                                                                                  ---                                                     --------->AHL20(2)                          ----                                                     <---------AHL20(2)                          <---                                                   <-----------TBP                             <-----             <---------ANAC46               --------->HSFB2a(2)                          <---------MYB52(1)        <---------ANAC58             <---------TOE2(3)                                  --------->LBD16        <-----------RAV1(1)          <---------TOE1(3)                                <---------LBD16        <---------ANAC58    *TSSxxxxxxxxxxxxxxxx>smallRNA(i)     <------ZmHOX2a(1)  --------->GLK1(2)    <----------DOF2  <---------ARR14(2) <---------GLK1(1)<---------YAB1     ----------->GT1 ---------   tctcttctttgtgtggctgtgaggttttggcagaaatttagggtttctcgactatttatatgagtgaggatggagacagggttaaaattccggtttttta  13400000                        --------->ARR14(2)                        <---------ARR14(2)           <---------ICU4   --------->LBD16           --------->YAB1   ----------->GT1          <---------YAB1------>MYB46(1)        <---------ICU4  ------>MYB83       --------->ICU4--------->DEAR3(2)   ----------->RAV1(1)<---------MYB59 -------->ORA47(1)  <-----------------AGL1 ----->NtERF2 <-----------GT1 ---------ATERF1(1)------>MYB46(1) ------->DEAR3(1)  ------>MYB83     <---------ANAC55(2)                                           --- ------>DEAR3(2)   --------->MYB52(1)                                                             --- ----->At4g35610 <---------MYB59    --------->ANAC55(2)                           <---------AHL20(2) ------At4g35610 ------->GAMYB   --------->ICU4                               <----------DOF2 >>>>>>> ------GT1--------->ICU4--------->MYB52(1)     --------->WOX13(1)    <---------ALFIN1 ----------->GT1 -------------->TaNAC69(2)<---------LBD16 <-------TEIL          <---------ZAT18  --------->AHL20(2)   gccgaccacataattataaccgaaccgaaccggaaattatgtgattcatcaattactctgttttagtgcaaacaccttctcttttaaattgtagaaaacc  13400100           <---------TOE2(3)                                --------->AHL20(1)                     --           <---------TOE1(3)                                <---------AHL20(1)                  -----    <---------ARR11(1)                                      <---------AHL20(2)               --------    --------->ARR11(3)                                      --------->ARR11(3)               --------   <---------CCA1(2)                                     --------->AHL20(2)     --------->ZAT6------- --->MYB46(1)  ----------->GT1                     <---------ANAC58    --------->ANAC58    --------->SPL7 --->MYB83 --------->MYB59                         <---------ANAC58    --------->ANAC46<------------- >>MYB2<----------DOF2                            <-------TEIL         --------->ANAC58<-------------   aaatcaaatcttttaggttgtgaatttggatagaattgggaataaatccatgttcgtgataaaatattgattcaagctattaacacaagttagtaccgca  13400200                                                                              --------->AHL20(1)                                                                              <---------AHL20(1)                                                                              <---------AHL20(2)                                                                              --------->AHL20(2)                                                                             --------->AHL20(2)                                                                             <---------AHL20(2)                                                                          --------->AHL20(2)        ---------->DOF2        ----------->GT1                        --------->AHL20(2) ------->YAB1              --------->AHL20(2)                        <---------AHL20(2) ------>RAV1(1)            --------->AHL20(1)           --------->ANAC58 --------->AHL20(2) ->ANAC58                  <---------AHL20(2)      <-----------GT1   --------->AHL20(2) ->ANAC58                 --------->AHL20(2)    <---------ICU4   --------->AHL20(2) -->LBD16           <---------HSFB2a(2)        --------->ICU4   <---------AHL20(2)               ---- --AtSPL8           --------->HSFB2a(2)       --------->TOE2(3)--------->AHL20(2)            <------- --AtSPL3        <----------DOF2      <---------AHL20(2)--------->ANAC58 <---------AHL20(2)  --------   acaataaatccaaagtaatcttttagaaaaaaattgttaataaatctacattattaccaagtcaatttaaaataaataaataaattcagaaaaataaggt  13400300                                                                                        ----------->GT1                                                                                      <---------ICU4                         <---------ZAT18                                              --------->YAB1                         --------->WRKY12                                            --------->ICU4               --------->MYB46(3)                                                   --------->AHL20(1)              -------->P --------->WRKY38(1)                                --------->TOE2(3) ----->ATHB12 ------>MYB46(1)             --------->CCA1(1)                 --------->TOE1(3) --TOE2(3)    ------>MYB83                --------->RVE1(1)            <---------ATHB12 <---------YAB1 ->MYB59   --------->MYB46(3)       ----------->GT1            --------->AHL20(2)  --------->YAB1   cattggacaaacatccaacctctctagttgactcaagggagaaaatatccaatctctctacaaaaaaaaatcaataaaccataaaaaataatgaaaaaca  13400400  Previous    Next  AGI:  At2g31410.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK95063.1) Range:  from: 13399099    to: 13399928    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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