Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   <---------YAB1                                     <----------DOF2       <---------YAB1        <-----------GT1            ------>MYB83 --------->ARR11(3)        --------->YAB1             ------>MYB46(1)      --------->ZAT18                       -------   --------->TOE2(3)             <---------MYB59<---------ARR11(3)                           <------- -------->YAB1             <-------TEIL        --------->YAB1                               <-------- ----->YAB1            <---------TOE2(3) <---------ZAT6 <---------ZAT18              <---------ICU4 - ---->GT1 <---------YAB1  --------->CCA1(2)   <---------YAB1--------->ATHB12        <---------ATHB12<   tataatcttataacaattgtgttttaagatacaaacctactttgtgttatgatatttgttcactattggttttggtatatatccaaatcatttttcaggg  13388600                                                              --------->ANAC58                                                              --------->ANAC46                                                              --------->ANAC58         <---------TOE2(3)                                                   --------->ICU4          ------->GAMYB -->LBD16                                          <---------YAB1         <---------MYB55(2) --LBD16   <----------DOF2          --------->ANAC58       --------->ZAT18<---------MYB52(2) -LBD16    <---------DAG2           --------->ANAC58       <---------ZAT18--------->MYB46(3)--------- -------->AHL20(2)        ---------->DOF2    <---------ARR11(3)           <------------MYB.PH3(2) ---------AHL20(2)    ---------->DOF2 --------->ZAT18      --------->ZAT14<---------MYB111(2)       -   aattaaatactgactttattctctaaaagaaagaaggaaggccacaagatgtcaagattagtccacacaaatgccaacaaacttgtattgatgttaaaga  13388700                                                                                                 ----                                                                                                 ----                                                  --------->ANAC58                         <---------ALFIN1                                                  --------->ANAC58                        --------->ZAT14                                                ------>NtERF2                        <---------RAP2.6(2)                                               ----------->HVH21                    <---------LBD16                                               --------->DEAR3(1)                   <---------At5g28300                                               ------->GAMYB                    <---------------AtSPL3                              --------->ANAC58--------->MYB46(3)               <---------ARR11(3)<---                              ----------->GT1--------->At4g35610               --------->ARR11(3)<--- <---------AHL20(2)           --------->ANAC58--------->DEAR3(2)        --------->ZAT18   <---------REM1(2) ->DOF2    ------>ZmHOX2a(1)  --------->RAP2.6(2)<------NtERF2          <---------ZAT18   <---------ZAT14 -------->AHL20(2)----------->GT1            <---------At4g35610----------->RAV1(1)<-----------GT1   aaattaatgtctcctccaatgtgtaatacagaccgcaaaaacatttcagccgacgaaattgttgtgcaacattgtccacaagattttacggctacactgt  13388800                                                          --------->YAB1                                                     <----------DOF2        --------->ANAC46                             <---------DAG2        --------->ANAC58                          ------>ZmHOX2a(2)        --------->ANAC58                         <------ZmHOX2a(2)        --------->DAG2 ----->ZAT14                                    --------->ARR11(3)       ---------->DOF2 ----->ETT(2)           --------->YAB1    --------->HSFB2a(2)--------->YAB1----------->GT1 ------ETT(2)        --------->TOE2(3)    <---------HSFB2a(2)--------->AHL20(2) ------ZAT14---------->DOF2    <----------DOF2  <---------ARR11(3)--------->YAB1 ---------->DOF2 ----   atacagactcacgaaaaagaaaacattaatagtcttttcagtttccataagatcgctttacaataatatcaaaataaaagtgaaaaagacagagaagaag  13388900              <-----------RAV1(2)        --------->ANAC46              <------NtERF2              --------->ANAC58             --------->LBD16             --------->ANAC58             --------->At4g35610      ------>MYB83            --------->DEAR3(1)        -------->P                      --------->ARR14(2)<---------ARR14(2)            --------->RAP2.3(2)       ------>MYB46(1)    --------->ANAC58    <---------YAB1        --           --------->RAP2.3(1)      <---------MYB59      --------->ANAC58 <----------DOF2          <-          --------->At4g35610--------->ICU4      <---------TOE2(3)    <---------ARR14(2)--------->ARR14(2)   --------->MYB52(1)      --------->CCA1(2) <------------CBF       <---------MYB46(3)  <---------ARR11(3) ------->GT1----------->RAV1(1)  <------ZmHOX2a(1)<---------REM1(1)--------->ALFIN1    *TSS ------>ZmHOX2a(1)   agaaacaacgagagccgcagaagttgaagaaatgaggacctacaaggcattgatgtaagaagcaaggatgtggttccttttgattcccaaaatcctctta  13389000       --------->DAG2                                                       --------->ANAC58      ---      ---------->DOF2                            --------->ANAC46           --------->ANAC58   ------ ------->ARR11(3)                  ------>ZmHOX2a(1)                 ---------->ID1          -------- --------ARR11(3)<---------CCA1(2)--------->ANAC46              <----------DOF2      ---------->ID1   aaatctcataaagcccttcttatcttcttctcttctcctcaacttgaatacacagaaacaaaactgcttttgtctctcaagtcatttgtcttataaaaag  13389100                            --------->DAG2                                          <------ZmHOX2a(1)                          ---------->DOF2                             --------->GLK1(2)                     <----------ID1                      <---------At4g35610     <---------LBD16                   --------->ANAC58                      ------>ZmHOX2a(1)<-----------GT1 ------>GLK1(2)    --------->ANAC58                 <---------GLK1(2)<---------GLK1(2)       -------- --->DAG2          ----------->GT1             <---------ANAC46      --------->ARR14(2)   --------->TOE1(3) -->DOF2         ---------->DOF2          ------>ZmHOX2a(1)          <---------ARR14(2)   --------->TOE2(3)   gttctgttcttgaacaagggaaagaaacaaaaggctgataactcctgttttgtagattcctctgatattcagattcttacttctcaggaaaaccctaaag  13389200                                          --------->ALFIN1     --------->ANAC58          --------->At4g35610                                          <---------ANAC58     --------->ANAC58       <---------At4g35610                                          <---------ANAC58   <---------ALFIN1         --------->At4g35610                                          <---------ANAC46------>NtERF2               <---------ZAT2                                        <---------ANAC46  --------->LBD16            ------->TEIL                                        <---------bZIP60(2)------>NtERF2          <---------REM1(1)                               <-------TEIL               --------->ANAC46     --------->ICU4                              --------->CCA1(2)          --------->DEAR3(1)  <---------At4g35610-----       <---------MYB52(1)    <---------ARR14(2)         <---------LBD16      --------->At4g35610<---- -->DOF2                     --------->ARR14(2)   ---------->DOF2      <-----------RAV1(1)      <----   aaaatttctgtttttttttgagaaatatgaagatacaatgtgatgtgtgtgagaaagctccggccacgcttatatgttgtgctgatgaagctgctctctg  13389300                                                             <---------ANAC58                                                             <---------ANAC58                                                   ------>MYB83                                                   ------>MYB46(1)                                                 --------->AtMYB61         <---------bZIP60(2)                     --------->DEAR3(1)                               <--         <---------ANAC46               --------->ANAC58<---------DAG2                            ---      ----------->HVH21                 --------->ANAC58<----------DOF2                         -----      ----------->TGA1   <---------At4g35610 --------->MYB46(3)                               ------- ---->ZAT14       <-------TEIL       --------->STY1(2) <---------DAG2                        -------- -----ZAT18   <---------TOE2(3)     --------->ANAC58--------->ANAC58                     ----------->RAV1(2) -----ZAT14   <---------TOE1(3)     --------->ANAC58--------->ANAC58                     ============   cgctaaatgtgacgttgaggttcatgctgctaataaactcgctagcaaacaccaacgcctttttcttgactctctctcaactaaattccctccctgcgac  13389400                                                            <---------AHL20(2)                                                          <----------DOF2                                                        <------ZmHOX2a(2)                                                        <---------RVE1(1)                                                       --------->ARR11(3)                                                       <---------ARR11(3)                                                       --------->AGP1                                                      <---------GLK1(1)                  --------->At4g35610                                                      --------->GLK1(1)              <---------WOX13(1)                                                     ----------->ARR10             --------->ATHB12   <---------ANAC58                              <---------ZAT14                  <---------YAB1   <---------ANAC58                              --------->ZAT14               <----------DOF2   <---------ANAC46                          <---------ARR11(1)             <---------ARR11(3) -------At4g35610                            --------->ARR14(2)             --------->ARR14(2) ------>At4g35610                            <---------ARR14(2)             <---------ARR14(2) ---->REM1(1)                                ------->TEIL------>ZmHOX2a(2)  --------->ARR11(3) ---->RAV1(1)                     ---------->ID1 --------->At4g35610       --------->GLK1(1) --->HVH21                   <----------DOF2<---------ARR14(1)             <---------GLK1(1)        < =====RAV           ------>ZmHOX2a(1)       <---------CCA1(2)          <---------ANAC46  <---------At4g35610   atctgccttgtaagaatacctcctcttctctcttttgtctctattcgtatctgcagagatctttatttgttttgagggtatcttttgattgagctgttct  13389500  Previous    Next  AGI:  At2g31370.1    Description:  bZIP transcription factor (POSF21). Identical to Probable transcription factor PosF21 (POSF21) [Arabidopsis Thaliana] (GB:Q04088); similar to bZIP transcription factor, putative (bZIP69) [Arabidopsis thaliana] (TAIR:AT1G06070.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16940.1); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827); contains InterPro domain Basic leucine zipper; (InterPro:IPR011700) Range:  from: 13386110    to: 13388600    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g31380.1    Description:  STH (salt tolerance homologue); transcription factor/ zinc ion binding. Identical to Salt tolerance-like protein (STH) [Arabidopsis Thaliana] (GB:Q9SID1;GB:Q9C558); similar to STO (SALT TOLERANCE), transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G06040.1); similar to salt tolerance protein [Brassica rapa] (GB:ABV89657.1); contains InterPro domain Zinc finger, B-box; (InterPro:IPR000315); contains InterPro domain Zinc finger, CONSTANS-type; (InterPro:IPR002926) Range:  from: 13388987    to: 13390547    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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