Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <---------AGP1                                                                                   --------->ARR11(3)                                                                                   <---------ARR11(3)                                               <---------ANAC58                    --------->ARR14(2)                                               <---------ANAC46         --------->SPL7                                               <---------ANAC58         <-------TEIL ==============HOX2a_HOX2a                                              <-------TEIL            <---------SPL7 ------>ZmHOX2a(2)                                             <---------ARR14(2)     <---------------AtSPL8   --------                                             --------->ARR14(2)     <---------------AtSPL3 <---------MYB59       <---------O2                         <---------MYB52(1) <---------HSFB2a(2) <---------ARR14(2)       --------->O2                      <---------LBD16       --------->HSFB2a(2)<---------CCA1(2)  --------->ANAC58                     --------->ARR14(2)    --------->AtLEC2   --------->LBD16<-----  --------->ANAC58                     <---------ARR14(2)   ================================HOX2a_HOX2a  --------->ANAC46  <---------ICU4    <---------GLK1(1)     ------>ZmHOX2a(1)   <---------TOE1(2) <-- --->DOF2         <---------TOE2(3)   --------->GLK1(1)    <---------ANAC58    <---------LBD16 ------ >ANAC46   <------ZmHOX2a(1)       <---------ZAT6          <---------ANAC58<-----------HVH21------>ZmHOX2a(1)   gtagaagccacgaggatgttaagaatcaccttcgatagtgatatccggttcgtgttcgagtccttgcagaagggtacggtccctggatctggtcctaacc  13368200                                  --------->ANAC58                           <---------ANAC58                           <---------ANAC58 ->MYB52(1)                --------->MYB52(2) -------AtMYB77---------->DOF2    --------->ANAC58                         --------------->AGL15   <- -------MYB52(1)          <-------TEIL    ------>ZmHOX2a(2)        ------>ZmHOX2a(2)               <- --->MYB46(3) ---------->DOF2    <---------LBD16     ------->TEIL<---------ARR11(3)          --------   gttgctctcacatccccaaaggctcgggttcgtgccacggatgatccctcttgtgaatctcaagcttgatctcaataccaaaatttggactatgggtgga  13368300                                                                     <---------YAB1                                                                   --------->CCA1(2) ---------DOF2                                                ---------->DOF2 --------DAG2    ---------->ID1                         ----------->GT1 ->ALFIN1      <-----------RAV1(1)   <----------DOF2    <---------REM1(1)     <---------ARR14(2)   actttttgtattcatttttgttgtatacgagaaactatgctttacatgttcttgtaagttgtaacaaagctatgagagcaaatttgtttgaaagtataag  13368400                                         --------->LBD16                                        --------->ANAC46                                      --------->MYB52(1)                              <---------YAB1                                  --------->YAB1                                 -------->HAHB4                             --------->ICU4                              ----------->GT1  -----------                       <---------HSFB2a(2)                             --------->CCA1(2)<------------CBF                 <---------------AtSPL8<---------LBD16        <------MYB83       --------->ATHB12    <-----------GT1    --------->HSFB2a(2)    --------->YAB1  <------MYB46(1)   <---------ATHB12<----   tttgtttaacaaatttgtaatagtactggaaatgtttgataaccggaataatagtcttcttatttggtttaagagacgataaatgattcagattgtataa  13368500                                                                           ------>ZmHOX2a(2)                                                                          <------ZmHOX2a(2)                                                                         <---------ARR14(2)                                                                         <---------ARR11(3)                                                                         --------->ARR14(2)                                                                         --------->ARR11(3)                                                                        --------->GLK1(1)                                      <------MYB83                      <---------GLK1(1)                                      <------MYB46(1)              <---------ANAC58          <---------MYB46(3)          <---------MYB46(3)           <---------ANAC58   <-------TEIL   ----------->GT1  <------------CBF               <------NtERF2 >GT1  <------------CBF <-----------GT1                         <---------DEAR3(1) -------GT1     <------------CBF <---------TOE2(3)             <---------MYB52(1)  *TSS     ---------   accggttcatattggttcgattgtataaaccggttgagattggttcgagttgaaatttgttcttcgttggcgagagatccttgaacgcttaaaccctcca  13368600                                       ------>ZmHOX2a(1)                                   <---------ZAT18                        <------ZmHOX2a(1)                          --------->CCA1(2) --------->ANAC46 --------->At4g35610                       ----------->ARR10 ---------->DOF2     <---------At4g35610                     --------->LBD16   ==========================HOX2a_HOX2a             ----------->GT1                   ----------->RAV1(2)--------->TOE2(3)   ------>ZmHOX2a(2)    --------->At4g35610 -- >ANAC46           <---------LBD16 --------->ZAT18        =======================HOX2a_HOX2a     <<<<   tggttttggattgaacatttcccctgagatttgggagtgtccttaaaccccatacactgatcgagctcaagaagaaggagaagcagagaaatggtgaata  13368700                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    <                                                            ------>NtERF2                           <                                                           <---------ALFIN1                         <                           --------->HSFB2a(2)             --------->DEAR3(1)                       <                           <---------HSFB2a(2)          --------->ANAC58                            <                        <----------DOF2     ------->GAMYB------->GAMYB                             <-        --------->ARR11(3) --------->HSFC1(1)           --------->ANAC58                       <-----        <---------ARR11(3) <---------HSFC1(1)-------->P --------->ANAC46                       ------     <---------------------WRI1            <---------MYB55(2)                                 ======= ------->ATHB12 ---------->DOF2            --------->MYB46(3)<------NtERF2          ------>ZmHOX2a(1) <<<<<<<<<<<<<LFY    --------->RAP2.6(2)   <---------MYB111(2)        ------>ZmHOX2a(1)       ------>ZmHOX2a(1)   aacattggaagataattccaaagccgcttctagaaacagttctcaacaaccatgtccaacgccaccgtgttcctcagcctctcatcctccatggtcctcg  13368800     <------NtERF2    <---------DEAR3(2)    ------>NtERF2   <---------DEAR3(1)  --------->ATERF1(1)  <------NtERF2 <---------RAP2.3(1) <---------SPL7 <---------ATERF1(1)              --------->ARR11(3) ---------ANAC46                  --------->ARR14(2) -------->bZIP60(1)               <---------ARR14(2) ---------ANAC58             --------->At5g28300 ---------O2                --------->TOE2(3) ---------ANAC58            ----------->GT1                                                 <-------- ---------DEAR3(1)          ------->GAMYB                                            <----------DOF2 ---------bZIP60(2)         --------->TOE1(3)                                     <---------TOE1(2) < ---------bZIP60(1)    ------>ZmHOX2a(1)                                          ------->TEIL    --- -----NtERF2          --------->TOE2(3)           --------->TOE2(3)             <---------SPL7   ---- ----O2              ========================HOX2a_HOX2a                       ------>ZmHOX2a(2) <--- --->O2              ------>ZmHOX2a(2)------>ZmHOX2a(1)                       --------------->AtSPL8- ===========================HOX2a_HOX2a   <----------DOF2   --------->LBD16<---------ATHB12 <--------   tggcgtcggcaaaaccacattgatcctcaaccgtaaaatcctctctttgaatccctaatttccccaattttgttcaaatgatcgtacctttgattcgttc  13368900                                                                                   ------->GAMYB                                                                                  --------->ANAC58                                                                                <---------DOF5.7(2)               <------MYB46(1)                                                  --------->MYB52(1)  ------>ZmHOX2a(2)                          --------->O2                     --------->DOF5.7(2)<--- <------ZmHOX2a(2)                           --------->REM1(1)             <---------ATHB12     <---- -ANAC58       <------MYB83                  <---------ALFIN1          --------->LBD16        ------- ---------ARR14(2)                           --------->bZIP60(2)       <---------ZAT18      ------>MYB83 ------>LBD16 --------->MYB59              <---------ALFIN1           --------->ANAC46      ------>MYB46(1) ----->HSFB2a(2)                    ---------->DOF2             <---------GLK1(2) --------->ANAC58<-- ------HSFB2a(2)      <---------LBD16      ----------->RAV1(1)  <---------ARR11(3)--------->ANAC55(2) -------->ARR14(2)  <---------REM1(2)--------->MYB52(1)         --------->ARR11(3)<---------ANAC55(2) -ANAC58 <---------YAB1         <----------ID1        ------>NtERF2  <---------LBD16      --------->AtMYB61   ccgatctcgttcttattaggtctactcggagattggaacaaagggccacatctcgctggctatgtagattttgcgcaatcgataacggaacaccatccag  13369000            <---------ARR14(2)                 <---------MYB52(1)            --------->ARR14(2)                <-------GAMYB           <---------CCA1(2)               ------>MYB83         --------->YAB1                    ------>MYB46(1)        <---------ATHB12                  <---------ALFIN1       ------>MYB83                      <---------MYB55(2)       ------>MYB46(1)                   --------->MYB46(3)      --------->WOX13(1)               --------->PCF2     --------->AtMYB61                <---------WRKY18(1)     --------->MYB46(3)              --------->WRKY38(1) --------->MYB46(3)                  --------->WRKY12                     <---------HSFB2a(2) ------ARR11(3)                      --------->WRKY45                     --------->HSFB2a(2) -----At4g35610                    --------->ZAT14                    <---------ZAT2 -->HSFB2a(2)                     <---------ZAT6<---------MYB46(3)    --------->ZAT2    ------->TEIL ----ZmHOX2a(2)     ------->TEIL  --------->ALFIN1                    --------->At4g35610   atcaccaccaatcatatccatggacgtcttggaccagtgttgacccaccgttgttgtccaattgcaaaacccagctcgagaattgtcttgaatctatgag  13369100  Previous    Next  AGI:  At2g31335.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G06137.1) Range:  from: 13367960    to: 13368244    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g31340.1    Description:  EMB1381 (EMBRYO DEFECTIVE 1381). similar to unnamed protein product [Vitis vinifera] (GB:CAO24062.1); contains domain P-loop containing nucleoside triphosphate hydrolases (SSF52540) Range:  from: 13368583    to: 13372277    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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