Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  --------->GLK1(1)        --------->MYB52(1)    <----------ID1                          <------ZmHOX2a(1)  --------->ANAC58  <---------ANAC58             <----------DOF2   <-----------RAV1(2)         ------  --------->ANAC58  <---------ANAC58       <-----------GT1      --------->YAB1   --------->GLK1(2) ------ID1      <---------ARR14(2)    ----------->GT1          --------->ICU4 <---------YAB1   ------   gacgaagcaaaaacggcgaattccttcccaatagaacaaggggtttatctacttttaacagggaaatgatcaggagcaatacgattctaaattgaaacct  13334100                                  --------->TOE2(3)                                  --------->TOE1(3)                        --------->HSFB2a(2)                                ------>MYB46(1)                     -------->P         <---------At4g35610                                -------->P<---------At5g28300       ------->TEIL     <-----------RAV1(2)                            ------>ZmHOX2a(1)                --------->AHL20(2)     <---------At4g35610          <---------At4g35610   ------>MYB83            --------->YAB1     <---------HSFB2a(2)          --------->At4g35610 <---------MYB111(2)    --------->WOX13(1)<----------DOF2 --------->At4g35610 --->TOE2(3)         --------->YAB1  ---------->DOF2--------->AHL20(2)<---------DAG2--------->At4g35610 --->TOE1(3)   --------->ZAT6 <---------ALFIN1 <---------ZAT18     <-----------GT1 ------->GAMYB  ---   caaaaacccttaagctaacactataatctcctccaaccttaaatcacagtgcgattaatcaaaaaaaatcaacctttctcgataacagcagatgagaaaa  13334200                      --------->ANAC58                      --------->ANAC58                    ---------->DOF2                                  <---------AHL20(2)                  --------->ANAC58                                 --------->CCA1(2)                  --------->ANAC46                            <------ZmHOX2a(1)                  --------->ANAC58                       <---------ZAT2               --------->TOE1(2)              <---------ARR11(3)  --------->ARR11(3)       <---------             --------->PCF2                   --------->ARR11(3)  <---------ARR11(3)  --------->LBD16      -------->P --------->LBD16     ---------->DOF2     --------->ZAT2           <---------ARR14(2)      --------->MYB52(1)          --------->YAB1         --------->At4g35610      --------->ARR14(2) ------>YAB1--------->GLK1(1)  --------->WOX13(1)    --------->ANAC46<---------YAB1  --------->ANAC46   tcaaaacttaccagagacccacgaaaggaacagcaattagaaagcgaaggtctataagcagctaggaagatataattgtcttaatatccgaagctttaga  13334300                                                                                               ------                                   <---------HSFB2a(1)          --------->GLK1(2)          --------->ANAC58                                   --------->HSFC1(2)        --------->ANAC58              --------->ANAC58    <------ZmHOX2a(1)              --------->HSFB2a(1)       --------->ANAC58              ---------- <------ZmHOX2a(1)                 <---------HSFC1(2)   <----------ID1       ------->TEIL --------->DAG2 -DOF2  --------->AHL20(2)     ----------->GT1        ---------->DOF2  ------>ZmHOX2a(2) ---------->DOF2   gaaggaggaatcaaatacagaggctatgggcaatggaaaattcgatgaagaagttgaaaagacaagaatttgatcgacgaatttaggggagaaaagcaaa  13334400                                                 <---------AHL20(1)                                                 --------->AHL20(1)                                 ---------->DOF2 <---------AHL20(2)                         --------->LBD16         --------->ARR11(3)                        <---------ANAC58      --------->AHL20(2)                        <---------AtLEC2   ----------->GT1                        <---------ANAC46  <---------ZAT6   <----------ID1 <---------ANAC58        ----------->GT1 ---->DOF2        <---------ANAC58     <------ZmHOX2a(1)                                <-----------GT1 -------------->ANAC81  <---------ANAC58----------->GT1    <----------DOF2   *TSS ------------>CBF  <   agaagaagacgaagagaattgggtttgcgtggaagaaaagaggagtgataaaatattgatgctttggagtttggagtactagttttcaattttcgatttg  13334500                                                   ---------->DOF2                                                 --------->MYB46(3)                                            <---------ANAC55(2)                         --------->ARR11(3)                                            --------->ANAC55(2)                        --------->YAB1            ------>ZmHOX2a(1)          <---------ICU4                                 <---------YAB1      <<<<<<<<<TBF1                  ----------->RAV1(1)  <---------ANAC55(2)  ------>ZmHOX2a(1)  <-- ----------DOF2                     --------->ANAC46      --------->ANAC55(2)  ======================   ggcttttcttcttcctcttctcttctcttctcttctatacaacattacttaaccaaagaaacgtgatcacgagttctcttcctcttctatgattttggtt  13334600                    ----------->GT1           <---------MYB46(3)           ----------->GT1        <----------DOF2       ------>ZmHOX2a(2)     --------->ARR11(3)                 <---------ANAC58          --------->ANAC58     <---------ARR11(3)                 <---------ANAC58          --------->ANAC46               ---- <----------DOF2   --------->DAG2 <---------AHL20(2)              --------->ANAC58               ---- ---------GT1    ---------->DOF2 --------->AHL20(2)            <---------ZAT18               <------- =============HOX2a_HOX2a      --------->TOE2(3)    ---------->DOF2         ---------->DOF2  --------   ttactttgatctttggttaaaaaggtaatctaacatttattagcttgaatccaaaaaagtctttgcacacacaaaaaaaaaagtcttgaagccaaaaaat  13334700                                                                                 ----------->ARR10                                                                           ------->PIF5                                                                           <-------PIF5                                                                           --------->MYB46(3)                                                                          <---------At4g35610                                                                          --------->ATERF1(1)                                                                          --------->DEAR3(2)                                                                          --------->At4g35610                                                                          --------->DEAR4(2)                                                                          <------NtERF2                                                                         <---------ATERF1(1)                                                                         --------->MYB52(1)                                                                       <---------ABI4(2)                                    <-----------GT1                    --------->ZAT18                                  <---------AHL20(2)                   <---------PCF2                             --------->AHL20(1)                        --------->ATERF1(1)                             <---------AHL20(1)                      --------->ZAT18        <----------DOF2      <---------AHL20(2)                      <---------ZAT18        --------->TOE2(3)   --------->AHL20(2)                      --------->ALFIN1--------->GLK1(2)  --------->ICU4        <---------AHL20(2)                        <---------ANAC46 <---------ARR14(2) ----->YAB1        --------->ARR11(3)                             <---------ANAC58 <---------GLK1(2) ------->GT1       <---------AHL20(1)                             <---------ANAC58 --------->ARR14(2) --AHL20(2)        --------->AHL20(1)      ----------->GT1      <---------YAB1  <-----------RAV1(2) ->AHL20(2) <---------TOE2(3)--------->AHL20(2)          <---------MYB52(1)--------->DEAR3(1)   tgtaatttttctttaatgtgatatattgaattttattttaacaacttgtataatgggccgattgttttgagtgggcaccggcccagattctaaacagacc  13334800                                                                                                    <                                    --------->TOE2(3)                                               <                             <-----------GT1                                                        -                         <---------AHL20(2)                                                     <----                         --------->AHL20(2)                                              --------->ARR11(3)                         --------->AHL20(1)                                              <---------AGP1                         <---------AHL20(1)                             <---------At4g35610    <-----                        --------->AHL20(2)                              --------->At4g35610    <-----                    ------->TEIL    --------->TOE1(3)                   <-------GAMYB    <---------ARR14(2)                    <-------TEIL    <----------DOF2                   <-----------RAV1(2)--------->ARR14(2)                --------------->AtSPL8                      --------->YAB1      --------->AHL20(2)---                <---------------AtSPL8  <---------YAB1     <---------YAB1 ----------->HVH21------>ZmHOX2a(2)   caaaaaaacaatagttaagatgtacattatattactaactttaaaattgagttttgaaaatatgatagtgagtcagttgacataaattttggatctagat  13334900                                                                                      --------->WOX13(1) --------->GLK1(2)                                                                ----------->GT1 ---------ARR14(2)                                                            --------->AHL20(2) ---------GLK1(2)                                                             <---------AHL20(2) -------->ARR14(2)                        <---------YAB1<-------TEIL      --------->AHL20(2) --ZmHOX2a(2)                            <---------AHL20(1)               <---------AHL20(2)   ------ ----ARR11(3)   <------ZmHOX2a(2)        --------->AHL20(2)           --------->AHL20(2)     -------- ----AGP1      <---------ARR11(3)        --------->AHL20(1)           <---------AHL20(2) --------->YAB1 -------->ARR10--------->ARR11(3)        <---------AHL20(2)         <----------DOF2--------->TOE2(3)   cagattcttggtatcaagatcaatatttagtctcagagcataatataatacaaattgatacatctagctcctttaattttttaaatgttaatcaaaaata  13335000  Previous    Next  AGI:  At2g31260.1    Description:  APG9 (AUTOPHAGY 9). similar to unnamed protein product [Vitis vinifera] (GB:CAO70695.1); similar to autophagy protein 9 [Glycine max] (GB:CAJ30206.1); similar to autophagy protein 9 [Saccharum officinarum] (GB:CAJ30211.1); contains InterPro domain Autophagy protein 99 (InterPro:IPR007241) Range:  from: 13329098    to: 13334477    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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