Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    --------->GLK1(1)                                                                  <---------GLK1(1)                                                               ------->GAMYB                                                             --------->At4g35610                                                            --------->MYB52(1)                                                            ------>MYB46(1)                                                            ------>MYB83        <-------GAMYB          <---------MYB52(1)         --------->MYB46(3)       <---------MYB46(3)     <---------RAP2.6(3)     ----------->HVH21     <------ZmHOX2a(1)        <-------GAMYB         <---------AtLEC2              <------ZmHOX2a(1) --------->ICU4       <-------TEIL                  <---------ANAC58  <---------------AGL15     ----- ----ZmHOX2a(1)    <---------PCF2                   <---------ANAC58 --------->TOE2(3)        <------ ---->ANAC58       <---------ANAC46      --------->DAG2   <---------MYB59     <------ZmHOX2a(1) <---- ---->ANAC58    --------->ALFIN1        ---------->DOF2<---------WRKY18(1)  --------->MYB59  <-------   ggaattaggaggttgcaagtggggtccattgccgttgtggccaaaagcgagattgcatgacccaactgaaatctcaattaggaaggagattgcattattt  13302800                --------->ARR11(3)                          ------->TEIL             --------->YAB1                                 <---------ARR14(2)          <-----------GT1                                   --------->ARR14(2)      <---------AHL20(2)                                 --------->ANAC55(2) ---->AHL20(2)  <---------ARR11(3)                       <---------ANAC55(2) ---YAB1  --------->YAB1       <-------TEIL         --------->YAB1 -----AHL20(2) <---------CCA1(2)                   <---------YAB1 --AHL20(1) <---------YAB1 <---------TOE2(3)     --------->YAB1           ----------->HVH21       ---   ttatatgtttatttatcatatctcatattaaggtccatttccttcagtctattatcatcatgtatccactatttgtttgacattggggaacattttagaa  13302900                        <---------CCA1(2)                       <---------AHL20(1)                       <---------ARR11(3)                                                           <                       --------->ARR11(3)                                                          <-               ----------->GT1                          <---------AHL20(2)                      -----       <---------ARR14(2)--------->ARR11(3)     --------->TOE2(3)                               -----       --------->ARR14(2)<---------ARR11(3)   <---------AHL20(2)<---------ANAC58                -----    --------->ALFIN1   --------->AHL20(1)<---------ARR11(3)     <---------ANAC58               <----- ------>YAB1 ---------->DOF2          ----------->RAV1(1)     <-----------GT1           <---------YAB1   taagaagtggaactggaaagtaaaatatatctattagttccaacatatttcattagttttaatttttcttgctccaaactctagtagtttataaatacac  13303000         --------------->AGL15         <---------------AGL15        <---------ANAC46        <---------ANAC55(1)        <---------ANAC58        <---------ANAC55(2)        <---------YAB1                 --------->YAB1        <---------ANAC58               -------->HAHB4       <-----------------------TaNAC69(2) ----------DOF2                        <---------ICU4 --------ANAC46                        <--------ATHB1 ---->ANAC58                          <---------ATHB51 ---->ANAC46           <-----------GT1--------->ICU4                              <----------DOF2   < ---->ANAC58      --------->AHL20(2)  <---------ATHB12                       ---------->DOF2        - ----LBD16    ---------->DOF2       --------->YAB1                   ---------->DOF2       <---------   ggcttgaattacgtttaaaagaaaataactaaactttctaataattctccaaatattagaacatgtcttagtaaagaattaaagctttgtttgtgtcaga  13303100        <------MYB46(1)      <--------P                                       ----------->GT1   <---------TOE2(3)                     ------------------------>ANAC81   <---------TOE1(3)                     ----------->GT1     <------------CBF ---------->DOF2                ---------->DOF2      ---------->DOF2                           ------ ---------AHL20(2)          --------->YAB1      ---------->DOF2                                <----- -------->AHL20(2)     <---------YAB1   ------------------------>ANAC81    <---------ANAC46    <----- --HVH21<------MYB83---------->ID1   <---------------------WRI1       ------>ZmHOX2a(1)        ------   aattaaaggttggaaccattttgttctcattcataaaagggagaagaaaaaaaagaaaagaaaaattgtttcctctgtcttgaagtatttagtagagagc  13303200                                                                              <---------ALFIN1                    *TSS  <-----------GT1                                 --------->ANAC58     ------------>CBF   ---------->DOF2             ------------------------>ANAC81 --->ZAT2        --------->ANAC46               ---------->DOF2           --------->ANAC46 ----ZAT2        --------->ANAC58             --------->ANAC58            --------->ANAC58        --- ----At4g35610   --------->ANAC58             --------->ANAC58        --------->ANAC46           ---- --->At4g35610 <---------ALFIN1     ------>ZmHOX2a(1)    ---------->DOF2<---------ALFIN1   ----------   tgtccaaaacaatacaaacacgtccaaaaaaccctctcctatgggaacaagaaagacccaaaagacacaaacacacacccaaactccatcaaacagaaat  13303300                                                                        ----------->HVH21                                                                    --------->ATHB12                                                                 <----------DOF2                              ------>ZmHOX2a(1)                 ------>ZmHOX2a(2)                <--- ------>DAG2          <----------DOF2                          <---------YAB1                  <----- ------>DOF2  <---------GLK1(2) --------->REM1(1)             --------->ARR11(3)    <---------At4g35610 ->GT1    ---------->DOF2  <-----------GT1                    <---------ARR11(3)    --------->At4g35610   aaagcaaaccaaaaaagcttctctcttttttcctacatttgatttaagctctaaatgttgaaatgatctttgatttgacattgtgaagctgaaatatagc  13303400           ---------->DOF2          --------->YAB1       --------->TOE2(3)          --------->ARR11(3)       --------->TOE1(3)          <---------ARR11(3) <---------MYB46(3)       <----------ID1 ------MYB46(3)     ---------->DOF2<------ZmHOX2a(2)  ----------->GT1             ---------->DOF2   < ----At4g35610  <----------ID1---------->DOF2     <----------DOF2                <XXXXXXXXXXXXXXXXXXX   tggtggtaaccttcaaagacgacaaagaaggaaaaagatcatcatcttctaacttttggtaattagataatttcattctctaaacaaagtctgatttttg  13303500                                                                   >>>>>>>>>RAP2.2<----------DOF2                                                          <----------DOF2        <---------ANAC58                                                       <-----------GT1           <---------ANAC58                                                   <---------ARR14(2)           <-------TEIL                                --------->YAB1     --------->ARR11(3)       --------->DAG2          ---------->DOF2 --------->ANAC58         --------->ARR14(2)     ---------->DOF2 ---------ICU4            --------->ANAC58         <---------ARR11(3) ---------->DOF2              <- XMIR866-5P--------->DAG2 --------->GLK1(2)       <------ZmHOX2a(1)--------->TOE2(3)--------->MYB52(1)   aatcaatactaaaaaagtgatagaagagaagctatcaaaacacaaaaacagaggatttttcttttccaatctaaaagaaaggtgcttaagggaattagtt  13303600                                                                                   <---------TOE2(3)                                                                                   <---------TOE1(3)                                                                                   <---------YAB1                                                                                 <---------ICU4                                                                                 --------->YAB1                                                                         --------->ICU4     ---------           <-----------GT1                                             ---------->DOF2 ----------->GT1     <------MYB83                        <---------TOE2(3)    <----------DOF2   <---------ATHB51     <------MYB46(1)                   <---------AHL20(2)    <---------ANAC58   --------->ICU4    <---------TOE2(3)            <----------DOF2             <---------ANAC58--------->AHL20(2)    --------->MYB59          <----------DOF2    --------->AHL20(2) ---------->ID1-------->HAHB4 --------TOE2(3)      <-----------GT1 --------->AHL20(2) <---------WOX13(1)  <---------AHL20(2)   tgagattaggttttaactgagtttatacaaactttctttatttaatgaaattaacttagattggcttttgtcttaaagattaattatggttgtgaaaatt  13303700  Previous    Next  AGI:  At2g31210.1    Description:  basic helix-loop-helix (bHLH) family protein. similar to basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana] (TAIR:AT2G31220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65796.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 13303220    to: 13305354    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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