Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                 ------>ZmHOX2a(1)                --------->ZAT14                                        <---------DAG2    --------->LBD16--------->WOX13(1)   -------       <---------ICU4                <-----------GT1     <---------HSFB2a(2)    <---------ZAT14  ---- -------ZAT18             <----------DOF2    ----------->RAV1(2)   ---------->DOF2          ---------   ggctcttcaacattactgggtcttccttctttatcaacttcaccttctcctgcttcgttccccaagttacaaagtcattcactatagtttggagaatcat  13300700                                                                                         --------->TOE1(3)                                                                                         --------->TOE2(3)                                                                                       ------->TEIL                                            --------->ANAC58                           --------->SPL7                                            --------->ANAC58                     <---------ARR14(2)                                   --------->GLK1(1)                             --------->ARR14(2)                                   <---------GLK1(1)                           <---------At4g35610                              ----------->GT1                                  --------->At4g35610       --------->AHL20(2)   <---------GLK1(2)        ------->TEIL             --------->MYB59       < -->YAB1                  <---------YAB1    --------->ANAC46                 <-----------RAV1(2)    < ----->AHL20(2)           --------->ICU4------>ZmHOX2a(1)                   <---------MYB52(1)      - >GLK1(2)               ---------->DOF2--------->TOE1(2)                   <-----------HVH21      <--   aaaatgagattaaaaatacaatagaataaagattgtgaaatcctacaagaaactgcatctctgagacacgatggcacagtcaggttccgaacgttaagag  13300800                                                                                 <---------bZIP60(1)                                                                                 <---------O2                                                                                 --------->O2             <---------ZAT14                                                     --------->bZIP60(1)          <---------ANAC46                                            --------->YAB1   <------NtERF2                                                      --------->TOE2(3)  --------->LBD16      ----------->RAV1(1)                            --------->TOE1(3) --------->DEAR3(1) <---------ALFIN1      <---------ANAC46 ---------->DOF2     ------->GAMYB ---------LBD16  --------->AtMYB61        --------->RAP2.3(3)        <---------YAB1 ------NtERF2--------->ZAT18              --------->DEAR3(1)        <---------ARR11(3)            <-- -------->ATERF1(1) --------->AtMYB61     --------->RAP2.3(2)       --------->ARR11(3)     ---------- -------DEAR3(1)--------->MYB46(3)     *TSS<---------RAP2.6(3)   <---------GLK1(2)    <---------MYB52(1)   tcgccggagttggagtgaaccaccacaacagtaatcgcctagagccgtctaaaaacaaaatcaaagagattatcttaacaacgacgtcgtttcttcgttc  13300900                                                                                 ------>NtERF2                                                                               ------>NtERF2                                                                               <------NtERF2                                                                               --------->ATERF1(1)                                                                               --------->RAP2.3(1)                                                                             <---------DEAR3(1)                                                                            <---------LBD16                                                                           --------->ANAC46                                                                          <-------TEIL                                                                         --------->ARR14(1)                                                                         --------->CCA1(2)                                                                        --------->ARR11(1)                                                                        <---------ARR14(2)                                                                        <---------GLK1(2)                       <---------YAB1                             <---------YAB1--------->DEAR3(1)       ----------->RAV1(2)      <---------YAB1                  --------->YAB1<---------ATERF1(1) --------DOF2       <---------ATHB12                  ---------->DOF2   --------->ARR14(2)        --- ----->AtSPL8------>NtERF2    <-----------GT1        <---------ICU4  <---------WOX13(1)         -----   cttttctacttctgaggcccaaatgatttttgttactattcactaatgggcttaattaaggcccaatattgatagatacgcggcgactagttaaggggca  13301000                                                                 --------->ZAT6                                                                 <---------ALFIN1                                                               ------>MYB46(1)                                                               *TSS                                                               ------>MYB83                                                             <---------MYB59                                                           ------>MYB83                                                           ------>MYB46(1)                                                          --------->ORA47(1)                                                          --------->MYB55(1)                                                         <---------MYB111(2)                                                         ----------->HVH21                                                         --------->DEAR4(1)                                                         ------->GAMYB                                                         --------->DREB2C(2)                                                         --------->DEAR3(1)                                                         <---------MYB46(2)                                                         <---------MYB55(2)                                                         --------->MYB46(3)                                                        <------NtERF2                                                        --------->DEAR3(2)                                                        --------->MYB46(3)                                                       ------>NtERF2                              ---                             <----------DOF2           <---------ATERF1(1)                       ----         <---------ALFIN1    <---------DAG2           <---------ALFIN1                          -----        <---------ZAT18  --------->ANAC58             --------->DEAR3(1)                       ------      --------->PCF2     --------->ANAC58           <-----------TGA1                      ----------- <---------ARR14(2)      --------->ANAC46          --------->ANAC46                       <---------- ------>MYB46(3)     --------->CCA1(2)             --------->ANAC58                  <---------ATHB12 ------>RAV1(1) ---------->DOF2                    --------->ANAC58    <----------DOF2   ------------   acaaatatggcccacttaaaaagaaacacgacttttcttatcgcgttgttctaacgccaccgaccgaacacttctttttcttctgcaataaaccaaaaaa  13301100                                       --------->ANAC58                                       --------->ANAC58                                       --------->ANAC46                                    --------->ZAT14                                    <---------ZAT14                                    --------->ZAT18 -------->GT1                 --------->DAG2                     <---------AHL20(2)             <---- ------->GT1                 ---------->DOF2             --------->ARR14(2)             <---------ANAC46 ---->DAG2               --------->ANAC58                ------->TEIL                   <---------ANAC58 ---->DOF2               --------->ANAC58      ---------->DOF2   --------->AHL20(2)     <---------ANAC58 ---->AGL15         <-----------GT1 <---------ZAT18      <---------ARR14(2)        <---------ANAC58 -----AGL15     --------->AHL20(2)<---------ZAT18     --------->ANAC58             <---------ANAC58 ----->AGL3   --------->TOE2(3)   --------->ZAT18     --------->ANAC58            <-------TEIL  -----   agttaaaaattcaaaaacttaattactaagcaaaagtgtgcacgaagaacaaagcgacgcatccgattttatttgtttgataagttcgtgtcgtcttcgt  13301200                                                                    --------->At5g28300                                                               --------->ZAT2                                                               <---------ZAT2                                                         <------ZmHOX2a(1)                              --------->At4g35610       <---------ZAT18                  <---------ANAC46                    --------->At4g35610               <---------AtMYB61                      <---------At4g35610 -----CCA1(2)<-----------RAV1(1)                  <-----------HVH21----------->GT1 ----->ID1--------->GLK1(2)---------->DOF2       <----------DOF2  ----------->GT1       <----------DOF2   ctctctaacccaattctgtggtgtctgaagaaagcagaatcaaatccatgtctttcagaggacttagcagggtaaaattacaaaaaaaaacttttctctt  13301300                                             --------->TOE2(3)                                            ----------->GT1               ------->TEIL        --------->YAB1 <---------ANAC58                --------->ANAC58 <---------ANAC46                --------->ANAC58 <---------ANAC58         <-----------RAV1(1)--------->YAB1   cttgcttaaaatcgatgtactcttgtctatgtcgcaagcatcttcaatgttaaaaatttgatttttatgaagtcgatgttaaaaaaaactaaacccatct  13301400                                                                                 <---------AtMYB61                                                                         <----------DOF2                                                                      <---------ARR11(1)                                                                      --------->GLK1(2)                                                                      --------->ARR14(2)                                                                      <---------ARR14(2)         <---------YAB1   <------ZmHOX2a(2)                           ------->TEIL    <-----------GT1      <---------ARR11(3)                          <---------CCA1(2) <---------ICU4          --------->ARR11(3)        ------->TEIL      <---------ARR14(1)            <-   ccatttttactcttattgagggtttaagatcactagatgaagtcaattcgatgaattttggattaaaaatcgaatcttttggtatggttttgatatgtgt  13301500                                        <-------GAMYB                                       =================RAV                                       <-----------RAV1(1)                                       --------->ALFIN1                                     <---------ANAC58                                     <---------ANAC58                              <---------HSFB2a(2)                               ----------->GT1                              --------->HSFB2a(2)                            ---------->DOF2                             <---------LBD16<-----------RAV1(2)        <---------ARR11(3)                           --------->ARR11(3)                       --------->HSFC1(1)                           <---------ARR14(2)                       --------->HSFB2a(2)       <---------CCA1(2)   --------->ARR14(2) --------->At4g35610   <---------HSFC1(1) --------AtMYB61           <---------ARR11(3) <---------At4g35610   <---------HSFB2a(2)          <---   tttggttttatatctgtagccaaatgcaatatctggaatgggtgttgcagatgagagcaaaaccacatttctagagcttcaaaggaaaaaaactcatcgc  13301600  Previous    Next  AGI:  At2g31190.1    Description:  similar to EMB1879 (EMBRYO DEFECTIVE 1879) [Arabidopsis thaliana] (TAIR:AT5G49820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40639.1); contains InterPro domain Protein of unknown function DUF647 (InterPro:IPR006968) Range:  from: 13298303    to: 13300839    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g31200.1    Description:  ADF6 (ACTIN DEPOLYMERIZING FACTOR 6); actin binding. Identical to Actin-depolymerizing factor 6 (ADF6) [Arabidopsis Thaliana] (GB:Q9ZSK2;GB:Q8LCM6;GB:Q93VZ4;GB:Q9SJX6); similar to ADF1 (ACTIN DEPOLYMERIZING FACTOR 1) [Arabidopsis thaliana] (TAIR:AT3G46010.2); similar to unknown [Populus trichocarpa] (GB:ABK93374.1); contains InterPro domain Actin-binding, cofilin/tropomyosin type; (InterPro:IPR002108) Range:  from: 13301063    to: 13302487    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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