Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   <---------MYB59                         <---------ARR14(2)    ------>MYB83  --------->AHL20(2)          --------->ANAC58                   <---------MYB111(1)          --------->ANAC58                   <---------MYB59 --------->YAB1                 --------- ----->LBD16             --------->ARR14(2) <---------At4g35610         <----------ID1      <-------- -----ANAC58            <---------CCA1(2)   --------->At4g35610      ---------->DOF2   --------->AHL20(2) -----ANAC46  --------->ANAC58         <---------TOE2(3)    <---------ATHB12     --------->YAB1 -----ANAC58  --------->ANAC58         <---------TOE1(3)  --------->WOX13(1)   <---------ARR11(3) ->ARR14(2)--------->TOE1(2) ------>ZmHOX2a(1) ------>MYB46(1)   ------------------------>ANAC81  <--   gtgaaatttcgaacgtaagacacttcatatcctagatgcttaaggtacctgcctaattcccaatcaaattcaaaagaacaaaatcataaaaaaatcataa  13292300                                                                                <---------ANAC58                                                                                <---------ANAC46                                                                    <---------ANAC58                                                                    <---------bZIP60(2)                                                                    <---------ANAC58     ---------->DOF2                                                <---------ANAC46                <  --------->TOE2(3)                                              ----------->TGA1                  -- >YAB1                 <XXXXXXXXXXXXXXXXXXXXMIR861-5P        ---------->DOF2    <---------ANAC58   <- -ICU4   --------->TOE1(2)                             <-------TEIL<-----------------------TaNAC69(2) --------DOF2        ---------->DOF2          --------->TOE2(3)  ----------->HVH21         ----------   ctttccataaacccaagaagttttaaagcttatttctccaagtcgatacctcaagagtacatcgaaagtgacgtagactcgtgcgtgtccaatgtgactg  13292400                                                                                                 <---                                                                                                 <---                                                                                                 ----             <---------ALFIN1                                                                    ----             --------->bZIP60(1)                                                               <-----             <---------bZIP60(1)        --------->TOE2(2)                                    --------     --------->ANAC58              <----------DOF2                           ---------->CDC5 <-------     --------->ANAC58     --------->HSFB2a(1)                            ------>NtERF2      --------- ------>ZmHOX2a(2)       <-------TEIL   --------->TOE1(2)                --------->LBD16   ------>NtERF2 ------ZmHOX2a(2)        ------->TEIL<-----------GT1                   <---------LBD16  <---------At4g35610 ------->ARR11(3)    --------------->AtSPL3                       ------>ZmHOX2a(1)     --------->ZAT14 --------ARR11(3)--------->LBD16   <---------DAG2            <---------At4g35610        <---------ZAT18 ->HVH21  ----------->HVH21--------->KAN4(2)                 --------->At4g35610     <---------ANAC46   agatcgtaagcagtgacaccgcaaacgtacattccaactttaccttcgaccttaggcttaaacagctccttcttccggctcatcgtgttgtgcagccaca  13292500                                      <---------ICU4                                      --------->YAB1                                      -------->HAHB4                                     <---------ATHB12                                     --------->ICU4        <---------LBD16             <---------TOE2(3)       --------->MYB52(1)          <---------DOF5.7(2)      <---------ALFIN1           --------->DOF5.7(2)     --------->MYB46(3)          <---------MYB52(1)  ------>ZmHOX2a(1)             <-------GAMYB                                       <---------ARR14(2) ------At4g35610               <---------MYB46(3)                                   <-----------HVH21 ------ZAT2                   --------->SPL7                  <---------ANAC46      --------->ARR14(2) ----->ZAT2                  <---------MYB52(1)  <---------ANAC58                <---------ANAC58 ----->At4g35610            --------->ORA47(1)   ----------->GT1                 <---------ANAC58 ----ALFIN1                 <---------SPL7       <---------ANAC46           <----------DOF2 --->RAV1(1)                <-----------HVH21    <---------ANAC58        --------->GLK1(2) --ALFIN1               <---------ALFIN1<---------YAB1     --------->DEAR3(1)   <---------LBD16 >MYB46(3)--------->LBD16  --------->DEAR3(1)   <-----------------------TaNAC69(2)--------->LBD16   gctccttcccaccggaaattggtgctccaccgtccgttaatgatgacagagtcgtgaaacagcgacgtagttgagtttcttttccgggtctgaggggaaa  13292600                                             <---------ZAT14                                            ----------->HVH21                                            --------->ALFIN1                                          <---------ANAC46                                     --------->ARR14(2)                             --------->ANAC58               <---------O2          <---------ARR14(2)                             --------->ANAC58 <---------GLK1(2)                <---------ANAC58                       <---------TOE2(3)     ------ <---------ARR14(2)               <---------ANAC58        --------->ATHB12 <------ZmHOX2a(1) <-------   ttggattctgaattgagacttgggaagagaagagaagcgtattggagtgaagggtctacatgatttgaagagattaaggacagaagaagccattggtgtg  13292700                                                     ----------->GT1                                             --------->DAG2                                            ---------->DOF2                                         <------ZmHOX2a(1)                         <---------TOE2(3)                                       ----------->GT1                            <---------At5g28300                                     <---------ARR14(2)      --------->At4g35610 <-----------GT1                                     --------->ARR14(2) --------->ATHB12      <---------ICU4                      *TSS       <---------LBD16   <---------ANAC46          --------->ICU4 --->ALFIN1    --------->LBD16--------->ARR11(3)  <------NtERF2          --------->ZAT14 --ANAC46  ------>ZmHOX2a(1) <---------GLK1(1)  <---------DEAR3(1)       <---------ZAT14   gaacgataagctccttccgaagaagatgatgaaatctcggataggaaaaagcggcgagtgattagctaaaacctctgaactaattacggtttgtgtaaac  13292800                <------MYB46(1)                <------MYB83                           <-------GAMYB                ----------->GT1                       --------->MYB111(2)               --------->MYB59                        --------->MYB55(2)             <---------ARR14(2)                       <---------MYB46(3)             <---------MYB52(1)                     <---------ANAC58             --------->ARR14(2)                     <-------GAMYB --------->AHL20(2)             ----           --------->LBD16                          <---------ANAC58                            <----         <---------LBD16<---------ICU4             <---------MYB46(3)  <---------AHL20(2)       <----        <-----------GT1 --------->YAB1       <---------ALFIN1     <---------AHL20(2)            -----       <-----------GT1 <---------ATHB12<------ZmHOX2a(1)          --------->AHL20(1)         --------   cggttttattttccggttcggtttaatcaagacttgttagaggagcaccatcttggttgttgacgaaattttttaaaatgtctaggtttttcaaataata  13292900                                                                              --------->AHL20(2)                                                             --------->ARR11(3)     <---------AHL20(2)                                                             <---------ARR11(3)     --------->AHL20(2)                                  ----------->GT1           --------->YAB1    <---------AHL20(2)                    --------->MYB52(1)                     <---------YAB1    --------->AHL20(2) ----->CCA1(2)    <---------MYB52(2)                     --------->YAB1  <---------YAB1 -----AHL20(2)  --------------->AGL15                   <---------YAB1  --------->AHL20(2) -----AHL20(1)  <---------------AGL15                   --------->ICU4  <---------AHL20(2) ---->ARR11(3) ----------------->AGL2                <---------ZAT6    --------->YAB1---------->DOF2 ->AHL20(2)    <-----------------AGL2  ---------->DOF2--------->YAB1   --------->AHL20(2)   tatgggattgtctattagccactaatggaatattgaaggaaaaaagaatgttttagtgatgatgatattggaattaaaattaaaatttaaagaaccatat  13293000                          <---------MYB52(1)                          --------->DOF5.7(2)                         --------->TOE1(3)                         --------->TOE2(3)                       --------->ICU4                     <---------ARR14(2)                  --------->ANAC55(2)                  <---------ANAC58                  --------->ANAC46                  <---------ANAC58            <---------ANAC46            <---------ANAC55(2)                                                                    --            <---------ANAC58      --------->YAB1                  <---------YAB1            <--------            --------->ANAC55(2)  <---------YAB1                --------->ICU4           --------->SPL7            <---------ANAC58<---------DOF5.7(2)             ---------->ID1  <---------AHL20(2)    <--            <---------ANAC55(1)--------->YAB1       --------->ANAC55(2)  --------->TOE2(3) --------->MYB52(1)   ttcgatgtgatattacgtatgcgtaatcgttaactataatcgtttaatctactcacgtttttgtcattttgattttcttaaatttttaagtacgaccgga  13293100                           ------>MYB46(1)                        --------->HSFB2a(1)                        <---------HSFC1(2)                        --------->HSFC1(2)                                                  ---------                        --------->MYB46(3)                                                  <--------                        <---------HSFB2a(1)    --------->ARR11(3)                        --------->AHL20(2)                     <------ZmHOX2a(1)         <---------ARR11(3)                       <---------AHL20(2)                   <---------TOE2(2)       ---------->DOF2                    --------->ARR11(3)                   <---------TOE1(2)      --------->AHL20(2)                  --------->AHL20(1)                 --------->TOE1(2)    <---------YAB1 --------------->AGL15    <---------AHL20(1) <---------ZAT6 <---------ANAC58      <---------AHL20(2)                 ------>ZmHOX2a(1) --------->CCA1(1) --------->GT1  <---------ANAC58      --------->AHL20(2)                --------->TOE2(3)--------->YAB1 -LBD16  <---------TOE2(3) ------>MYB83   <---------AHL20(2)----------->GT1   <---------AHL20(2) -------AtMYB61 <---------ANAC46<---------TOE2(2)<---------ETT(2) ---------->DOF2 ----------->GT1   atggtgttattgatgttttcgtaggaaccatccataggttttaattaaaggtctacaaaatatagtttaaaagtccttaatattttgtaaataatatcta  13293200  Previous    Next  AGI:  At2g31170.1    Description:  tRNA synthetase class I (C) family protein. similar to tRNA synthetase class I (C) family protein [Arabidopsis thaliana] (TAIR:AT5G38830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44332.1); similar to hypothetical protein OsI_031279 [Oryza sativa (indica cultivar-group)] (GB:EAZ10047.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO42791.1); contains InterPro domain Cysteinyl-tRNA synthetase, class Ia, N-terminal; (InterPro:IPR015803); contains InterPro domain Aminoacyl-tRNA synthetase, class 1a, anticodon-binding; (InterPro:IPR009080); contains InterPro domain Cysteinyl-tRNA synthetase, class Ia; (InterPro:I Range:  from: 13289432    to: 13292722    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version