Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                    <-------TEIL                ------->PIF4                ------->MYC3                <-------MYC3                <-------PIF4                <-------MYC2                <-------MYC4                ------->MYC2                     >>>>>>>>>SUP                ------->MYC4                 ------>NtERF2<---------AtMYB61                ------->PIF5                 <---------RAP2.6(3)               ===================================bZIP_DOF--------->ALFIN1 -------ARR11(3)<-------PIF5                 ----------->RAV1(1) ---O2         <---------ANAC46             <---------ATERF1(2) ---bZIP60(2)  --------->ANAC55(2)          ----------->HVH21                      --------->SPL7 ---ANAC46     <---------ANAC58             --------->ATERF1(2)            --------->SPL7 >REM1(2)      --------->TGA1a              --------->ETT(2)               <---------ZAT18        <-- ->TGA1        <---------TGA1a              <---------ETT(1) --------->PCF5--------->ZAT14     ------ ->HVH21       <---------ANAC55(2)     ------>ZmHOX2a(1) --------->ZAT14 <---------SPL7       <------ -HVH21        <---------ANAC58        <----------DOF2  <-----------RAV1(1)<---------ZAT14 ----------   ggtctcatctatatatcacgtgcatcattttgttttatgtcctttgccgacagtgtctgtgtggtccgtcttagtcgtacactcgtacagagacctgtac  13200900                                                                            <---------ALFIN1                                                                       <-----------GT1                                                                     <---------YAB1                                                                   <---------ICU4                             --------->GLK1(2)                     --------->YAB1         <-----------GT1    <---------GLK1(2)                     --------->ICU4                ----- --------DOF2       <---------YAB1                                <---------YAB1         --------->YAB1 ->TEIL<-----------GT1   <---------TOE2(3)                      --------->YAB1   --------->ARR11(3) ---CCA1(2) <----------DOF2<------ZmHOX2a(1)                    <--------HAHB4   <---------ARR11(3) ----->AtSPL8     <---------AHL20(2)     ------>ZmHOX2a(1)     <---------YAB1   <---------CCA1(2)   ctttcattttttcactttgtttatttttaggaatctctaactcctactactactactcttatactattattattatccacacatatctatttcataactg  13201000                                                                                 <---------AHL20(2)                     <----------DOF2                                            --------->AHL20(2)                    ------>ZmHOX2a(2)                                           --------->AHL20(1)                   <---------RVE1(1)                                            <---------AHL20(2)                   <------ZmHOX2a(2)                                            <---------AHL20(1)                  <---------AGP1                                                --------->ARR11(3)                  <---------ARR11(3)                                            <---------ARR11(3)                  --------->ARR11(3)                                       --------->AHL20(2)                  --------->AGP1                            <---------YAB1 <---------AHL20(2)                 <---------CCA1(2)                          <---------ANAC55(2)--------->AHL20(2)           <---------AHL20(1)                          --------->YAB1  --------->ICU4           --------->AHL20(2)                          <---------ICU4--------->YAB1          <---------AHL20(2)                   ----------->GT1  --------->AHL20(2)   <---------AHL20(2)     --------->TOE2(3)     <-----------GT1    <---------------AtSPL8--------->AHL20(2) ---------->DOF2 ------>GT1--------->AHL20(1)              ---------->DOF2  <---------ANAC46<---------AHL20(2)   gtaataacataaatattttagatcttttttttcgatttcactaagaaaagagtacaaacattatgtataaataaaaattaaatatatttaaaagaaacta  13201100                                                                                          --------->At4g35610                                                                                          <---------At4g35610                                                                                          -----------                                                                                          <---------ZAT2                                                                                          --------->ZAT2                                                                              ------->GAMYB                                                                              =======================               --------->DAG2                                                <---------MYB55(2)              ---------->DOF2                                                --------->MYB46(3)     -         --------->AHL20(2)                                                 =========================  --------->TOE1(2)                                                        =========================RAV  --------->TOE2(2)                                                        ========================== --------->ANAC55(2)                                                       --------->MYB52(1)       < <---------ANAC58                           <---------ANAC46               ----------->RAV1(1)  <---- <---------ANAC46                        --------->WRKY12                  <---------ALFIN1     ----- <---------ANAC55(1)              --------->ATERF1(1)          <---------At4g35610       ------>NtERF2 <---------ANAC55(2)              <------ZmHOX2a(1)            <-------GAMYB---------->DOF2    ------ <---------ANAC58              <------ZmHOX2a(1)               --------->At4g35610      <-----------RAV1(2)   gtaacgtatgaataaataaagtagggtccaataggaggagccattgacttggaagcatatgagacagttgagaggcccaacagcccatcgccagctggat  13201200              ----------->HVH21            <---------bZIP60(1)            --------->ANAC58            <---------TGA1a            --------->TGA1a            <---------O2            --------->O2            ==============================bZIP_DOF               ------>MYB83            --------->bZIP60(1)                                <---------MYB59            --------->ANAC55(2)                               *TSS  ------>ZmHOX2a(1)            <---------ANAC55(2)                            ----------->HVH21            --------->bZIP60(2)                           <-------PIF5            <---------bZIP60(2)                           ------->MYC3            <---------ANAC58                              <-------MYC3            --------->ANAC58                              ------->PIF5            <---------ANAC58                              ------->MYC2            --------->ANAC46                              <-------MYC2            <---------ANAC46                             --------->ANAC58           <-----------------------TaNAC69(2)            <---------TGA1a          <-------------DYT1                             --------->ANAC58        <-----------HVH21                                --------->ANAC46       --------->ANAC46                                  <---------ANAC55(2)     ---------->DOF2                                     --------->ANAC55(2) >RAV1(2) ------------->DYT1                             --------->O2 =====================MYC_MYB                            --------->bZIP60(2) -------------->AGL15                                    --------->TGA1a                          <<< =====================bZIP_DOF                           <---------O2                           <xxxx =RAV=================bZIP_DOF                         <------------OsbHLH66                 <xxxxxxx ---------------AGL15                                  <---------ALFIN1                     <<<<<<<<<TBF1 -----GLK1(1)------->MYC3      ====================================bZIP_DOF  <-----------HVH21 <<<<<< ---->GLK1(1)<-----------HVH21 <----------DOF2 ------>ZmHOX2a(1) ------>MYB46(1)        ------>ZmHOX2a(1) --->ARR14(2)<-------MYC3  <---------ALFIN1 ----------------------->TaNAC69(2)       ---------->ID1   ttcccctaaaagtcacgtgacctctctccccatctttcttcactatctccttccttcccacgtgaccttcctctctctctgtccctcgtccttcttcttc  13201300                                                                                     --------->YAB1       <<<<<<<<<TBF1  ------>ZmHOX2a(1)                                              <--------HAHB4    <<<<<<<<<TBF1    <---------ALFIN1                                                <---------ICU4 <<<<<<<<<TBF1     ------>ZmHOX2a(1)                                                 --------->ATHB12 <<<<<<TBF1  <<<<<<<<<TBF1   ------>ZmHOX2a(1)                              --------->ANAC46        - xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                              <---------YAB1--------->LBD16      --- xxxxxxxxxxxxxxxxsmallRNA(se3)                                 ------>ZmHOX2a(1)    <---------ATHB12< <<<TBF1  <<<<<<<<<TBF1  ------>ZmHOX2a(1)                 <---------ZAT18 <---------LBD16       ----   ttcttcttcttcttcttcttcctcctccttcctcgatagagccttctccgattatgctctgtgtcctcattgttatctccggtacaatcatttctcttcc  13201400                                                                                     <---------ANAC46                                                                                    <---------LBD16                                                                                  ----------->HVH21                                                                                 ------>ZmHOX2a(2)                                                                                --------->At4g35610                                                                                <---------At4g35610                                                                                <------ZmHOX2a(2)                                                                                <---------GLK1(1)                                                                                --------->GLK1(1)                                                                               <---------AGP1                                                                               --------->ARR14(2)                                                                               ------->TEIL                                                                               <-----------ARR10                                                                               --------->ARR11(3)                                                                               <---------ARR14(2)                                                                            --------->ANAC55(1)                --------->ANAC46                                            --------->ANAC58                --------->ANAC58                                            --------->ANAC58    ------>ZmHOX2a(1)                                                       --------->ANAC55(2)    <----------DOF2                                                         <---------ANAC55(2)    <- <------ZmHOX2a(2)           <----------DOF2                                --------->ANAC46      <-- -------->ARR14(2)     <-----------GT1                  <-----------GT1    <---------LBD16       <--- ------>LBD16   --------->ANAC58                      <---------AHL20(2)--------->YAB1--------->LBD16 ---------ARR14(2) ------->TEIL               <----------DOF2          <---------ATHB12          <--- ----->LBD16   --------->LBD16            ------>ZmHOX2a(2)          --------->WOX13(1)<------NtERF2   ccgatccttttctattccacgaatttcacatctttcgcatttgatcgtctttatattttatcttgttgattcaatcatacggatctgccggagtaaatgc  13201500                                                                          --------->ZAT18         --------->WRKY18(1)                                              <---------ZAT18        <-----------HVH21               <---------AHL20(2)   <---------TOE2(3)        <---------TOE1(3) --------MYB52(1)              <-----------RAV1(1)      <---------YAB1    --------->ZAT14 -----GAMYB            --------->ARR11(3)         <---------AtMYB61 --------->TOE2(3) <---------TOE2(3) ------ANAC58          <---------ARR11(3)--------->ATHB12<---------ICU4   <---------ZAT14     <------ ------ANAC58         <---------GLK1(1) <---------YAB1  --------->ICU4<---------ICU4 ---------->DOF2   cgttgctctcggtcattgaatttgatatctgtaatgtgggtttttattggttttggtgattatgaggtttcattagtgctctcttgttaaagtttgcatt  13201600                                                                        <---------DAG2        <------                                                                  --------------->AtSPL8   <---------TOE2(3)                                           <---------DAG2     <---------YAB1       --------->ARR14(2)                                           <----------DOF2  --------->YAB1         <---------ARR14(2)                  <----------DOF2 <-------TEIL             --------->ICU4<----------DOF2   <---------TOE1(3)    --------->CCA1(2)             ------->TEIL            <---------WOX13(1)   <---------LBD16-------   <---------ARR14(2)         <---------------AtSPL8<---------MYB46(3)------->TEIL <---------GLK1(2) ----DOF2     ---------->ID1  <---------KAN4(2)  <-----------RAV1(1) <-----------GT1<---------RVE1(1)   ttggagatttgagtttggctctttgatgtgagaatgtacattgaactttttgtgttgttgaatgatgaattgtaccttttgtgcggattttttgaggtta  13201700                          <---------ATHB12                         <---------MYB52(2)                     <---------PCF2                    ----------->TCP11(1)                  --------->ALFIN1                <-----------RAV1(1)          <---------AHL20(2)          --------->AHL20(2)                                          <---------ZAT14         --------->AHL20(2)--------->MYB52(1)         <-----------GT1 --------->ZAT14 ---ARR14(2)    <---------ANAC46            --------->DAG2--------->ZAT14                          -- -->ARR14(2) --------->GLK1(2)             ---------->DOF2<---------ZAT14 <---------GLK1(2)      <---   ctctcttgatattaaattctgtgggccaataacgaattgatgacataaagttgtttttactacagagaacagaacagagtcttcttattttgctcatttt  13201800  Previous    Next  AGI:  At2g31005.1    Description:  Encodes a Cysteine-rich peptide (CRP) family protein Range:  from: 13200581    to: 13200874    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g31010.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G58640.1); similar to ATP binding / protein kinase/ protein serine/threonine kinase/ protein-tyrosine kinase [Arabidopsis thaliana] (TAIR:AT2G42640.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT3G58640.2); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ71369.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69880.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ69776.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR00 Range:  from: 13201262    to: 13207205    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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