Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <-----------GT1                                  --------->YAB1                                 <---------AHL20(2)                                --------->AHL20(2)            ----------->GT1                           <---------ANAC58               <-------GAMYB                           <---------ANAC46       <--------ATHB1     --------->ANAC46      <---------ANAC58       --------->ATHB12                        --------->GLK1(2)     --------->O2     <---------ANAC58           <---------YAB1                           <---------ARR11(3) ---->TOE2(3)         <---------ANAC46           --------->ICU4               <---------YAB1 ---->TOE1(3)         <---------ANAC58           <---------ATHB12  <---------YAB1     --------->YAB1   ttattccacgagaggggataactagcgtagcttatataataactttgtacaatgatttggggttaagttatttttggattatgctaaatcaaaatctaat  13159900                             --------->ATHB12                             <--------ATHB1                            <---------ATHB12                            --------->ICU4                  <---------ANAC58                >>>>>>>>>WRKY18                <---------WRKY18(1)               --------->WRKY12               ----------->HVH21                                      ----------->GT1           <----        --------->ANAC58 <---------WRKY38(1)                          --------->YAB1         --------        --------->ANAC46 <---------WRKY12                ----------->GT1                    ---------        --------->ANAC58--------->WRKY18(1)              <----------ID1            <----------DOF2 --------->ALFIN1 <---------ANAC58 ---------->DOF2     --------->MYB52(1)    <---------ICU4----------   atagtggtgcaagccccttgacttgggtcaatgattcaaaagcttatacaaaaaaaaaaacgaaaaaactaatagtaaaacattactttagaaaaaagtt  13160000          --------->AHL20(2)       --------->AHL20(1)   --------->YAB1   <---------ICU4              <---------DAG2  <---------ATHB12             <----------DOF2 -------GT1       <---------ICU4        <-----------GT1              --------->CCA1(2) --->GT1  <---------AHL20(2)   --------------->AGL15       --------->YAB1            <---------AtLEC2 >DAG2 <---------ARR11(3)--------->At4g35610  --------->ZAT14       --------->ARR11(3) >DOF2 <---------AHL20(1)<---------At4g35610  <---------ZAT14       <---------ARR11(3)   actaatcaatatttttttaaaaatttcagattactttataagttactctatactcatagactcatagtgagatatagttctatttttacatggatgaatt  13160100                              <-----------GT1                             <---------AHL20(2)            <-----------GT1  --------->AHL20(2)    <---------ARR14(2)    ------->TEIL    --------->ARR14(2)<---------TOE2(3)            <----------DOF2                   <---------At4g35610 ------>ZmHOX2a(2)--------->TOE2(3)      <---------ARR14(2)       XXXXXXXXXXXXXXXXXXXX>MIR837-3P   ggatcgaatccatttatctacattaatgtatttaactaatgcagaacttaagccttttatcggaaaaaacaaaaacaaaactaatgcagattacagaact  13160200                <---------AHL20(2)       <---------YAB1                <---------ATHB51      <---------YAB1                --------->AHL20(2)  --------->YAB1              --------->YAB1        <---------ICU4            --------->AHL20(2)     --------->ICU4           --------->YAB1          <---------YAB1                    --------->ANAC58      *TSS -----          --------->AHL20(2)    ------>ZmHOX2a(1)           ---------->DOF2            ------>ZmHOX2a(2)        --------->YAB1         --------->TOE2(3)         --------->YAB1          <------------CBF    <---------AHL20(2)       ---------->ID1    <---------ANAC58      --------->ANAC58--------->ARR11(3)    --------->AHL20(2)      <-----------GT1    <---------ANAC58      --------->ANAC46<---------AGP1   atagatttaaaaataaaaataattcgattttttccttattattatgctggtttgcccaaaaataaaggtccaagtaaaactgaaattgatctggtcataa  13160300                                                                                        <---------GLK1(1)                                                                                        --------->GLK1(1)                                                                                        <------ZmHOX2a(2)                                                                                       --------->ARR14(2)                                                                                       <---------AGP1                                                                                       <---------ARR11(3)                                                                                       <---------ARR14(2)                                                                                      <---------ARR14(1)                                                                                     --------->LBD16                                                                                    --------->HSFB2a(2)                                                                                   <---------LBD16                                                                                 --------->DEAR3(1)                                                                                 --------->AtMYB61                   xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                         <---------ALFIN1                  xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                      <---------SPL7------>ZmHOX2a(2)                  xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                     <------NtERF2<---------CCA1(2)                 xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                     --------->ATERF1(1)          ----------->GT1                     <----------DOF2          <---------ANAC46<-----------ARR10       <----------DOF2                --------->At4g35610              --------->bZIP60(1) --------->ALFIN1xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)           <---------RAP2.6(2)<---------ALFIN1 ---->AHL20(2)  xxxxxxxxxxxxxxxxxxx>smallRNA(si3)  --------->ANAC46    <---------bZIP60(1)    <------   aaattggggctttagtaaaaaaaaaaaaaaaaaaaaaaacatctgtctctttcacttcacgtttgcgactgtgtcgtcgtccacctccggatctcatcgg  13160400                                       <-----------------AGL1                                  --------->ANAC58                                  --------->ANAC58                                 --------->SPL7        <---------ICU4          --------->SPL1(1)        <--------HAHB4          <---------SPL1(1) --------->GLK1(2)       <---------YAB1          <---------SPL7    <---------GLK1(2)       --------->ICU4        --------------->AtSPL3     <---------ICU4          <---------------AtSPL3     --------->YAB1          --------------->AtSPL8    <---------YAB1          <---------At5g28300 <------ZmHOX2a(1)  --------->YAB1           ------------------>SPL14                                   <---------ICU4 ---DEAR3(1)<-----------GT1<-----------GT1    <---------TOE2(3)           ---------->DOF2   cgtttcatcataattatctgtccatctattcaccgtacgactccgttttaggaatctgtggatgtcaatttgagagaaaagactgtcttcattacaacac  13160500                              <---------ANAC46                            <---------MYB46(3)                                     ------>ZmHOX2a(2)                           <---------AtMYB61                         <---------ANAC58                   <---------ICU4                                    <---------ANAC58                   --------->YAB1              <---------At4g35610  --------->ATHB12                  <---------ATHB12   <-------TEIL        <---------ATHB12         --------->GLK1(1)              <------ZmHOX2a(2)<---------MYB46(3)      --------->WOX13(1)      ------>ZmHOX2a(1)            --------->YAB1 --------->ALFIN1    --------->At4g35610 <---------YAB1<---------ARR11(3)   atttgggacaacaaggatcactcatggcagtggtggatgttcatcgtttcgctgagtcaatcacttgccatgcttggagtcctgatctctccagtatgtt  13160600                                                                                         <---------MYB52(1)                                                                              <------ZmHOX2a(2)                                                                             <---------AGP1                                                                             <---------ARR14(2)                                                                             --------->ARR11(3)                                                                             <---------ARR11(3)                                                    <---------ANAC58         --------->ARR14(2)                                                    <---------ANAC58         --------->GLK1(2)                                                 <-----------GT1            <------ZmHOX2a(1)                                          <---------MYB52(1)             <------ZmHOX2a(1) --------->MYB52(2)                             <----------DOF2 <---------MYB52(1)          =============HOX2a_HOX2a                   <------------------------ANAC81<-----------GT1<---------YAB1------>ZmHOX2a(2)  <---------ALFIN1<---------YAB1         --------->LBD16       --------->YAB1<-----------ARR10    <--   tctaacacctctctgattttgtgattctcttctttctctcttccgtcgttttttccgttttagaattataaatgaggaggatctatctatagttagtttg  13160700                                                                                                    <                                                                                                   <-                                            <---------YAB1                                         <-                                         <---------YAB1                                            <-                                    <---------ZAT6                                                 --                                 <XXXXXXXXXXXXXXXXXXXXMIR400                                       <-                                <---------ANAC58                                                  <--                                <---------ANAC46             --------->YAB1                     <---- -------ANAC46                  <---------ANAC58  --------->ARR11(3)                          <------   gctgggaagatagatagatgatacaactaaattgacttgtgttattcttatacatcttggtaatcaaatttcttcgagtcaatgttttatatgtctgttt  13160800  Previous    Next  AGI:  At2g30910.1    Description:  ARPC1/ARPC1A (actin-related protein C1a); nucleotide binding. similar to ARPC1b (actin-related protein C1b), nucleotide binding [Arabidopsis thaliana] (TAIR:AT2G31300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69944.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680); contains InterPro domain Actin-related protein 2/3 complex, subunit 1 (InterPro:IPR017383) Range:  from: 13160291    to: 13164184    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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