Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      <---------ANAC46                                                    <---------CCA1(1)         <---------AHL20(2)                                                    <---------RVE1(1)         --------->AHL20(2)                                                   --------->ARR11(3)        <---------AHL20(1)                                                   <---------ARR11(3)--------->REM1(2)                                                  --------->YAB1  ------->GAMYB                                               --------->YAB1    --------->MYB46(3)                                               <---------ICU4   ------>MYB83 --------->AHL20(1)                                              <---------ATHB51  -------->P   --------->AHL20(2)                                              <---------ATHB12  ------>MYB46(1)              --------                                              --------->ICU4   --------->MYB52(1)          <---------ARR11(3)                                            --------->YAB1    --------->AtMYB61            --------->ARR11(3)                                           --------->ZAT6    --------->MYB46(3)      <------ZmHOX2a(1)                                          <---------TOE2(3) >>>>>>>>>>MYB80  <---------AHL20(2)                                 <-----------GT1 <---------YAB1--------->MYB55(1)  <---------TOE2(3)      <----------ID1<---------ATHB12     --------->YAB1    <-----------GT1  --------->AHL20(2)      -   tagataaaaaaacaaaaaacaaatcaaaccatatgttacacattaacaataatgatattttaaaccaaccgcgtagaaattaatttaggataagataata  13157200                                                                  --------->HSFB2a(2)                                                              <<<<<<<<<GATA-2                                                              <<<<<<<<<GATA-4                                                              <<<<<<<<<GATA-3                                                              <------ZmHOX2a(2)                                                              <<<<<<<<<GATA-1                                                             --------->ARR11(3)                                                       ------>ZmHOX2a(2)                                                      <------ZmHOX2a(2)                                                      --------->GLK1(1)                  --------->AHL20(2)                 --------->ARR11(3)                  <---------ARR11(3)                 <---------AGP1     --------->CCA1(2)                               <---------ARR11(3)--------->AtMYB61    --------->ARR11(3)      ----------->GT1 --------->YAB1   <---------ARR11(3)    <---------ARR11(3)  <---------YAB1      --------->ANAC46 <---------AGP1                   ------- ->AHL20(2)       --------->AHL20(1)        --------->ANAC55(1)------>ZmHOX2a(2)       --------->TOE2(3) --------->DOF2  <---------CCA1(2)        <---------ALFIN1  <---------CCA1(2)         ----------->GT1   tacaaagatataaacttccatatattagtattgaaaaaacttccacacataataagatctctagatctctagaccaaaactgactccaacgtaaaatgga  13157300                                                                     --------------->AGL15                                                                     <---------------AGL15                                                                    ----------------->AGL3                                                                <---------ARR11(3)                    --------->YAB1                              --------->ARR11(3)                 --------->YAB1                                --------->RVE1(1)            ------>ZmHOX2a(1)                              --------->AHL20(2)                      --       <----------DOF2   --------->GLK1(2)--------->ANAC55(2)  --------->CCA1(1)    --------->ARR14(2)   <---------CCA1(2)---------->DOF2     <-----------GT1  ----------->GT1 <---------AHL20(2)      <--- ---->GT1  --------->TOE2(3)      <-------TEIL         ---------->DOF2   --------->AHL20(2)   -------   aacttatctctttcctcattaataaagattccaacattcattttacctattaagacagaaagaaaatatctctaatttaagaaacaaatctacatgtatt  13157400                                                                                                 ----                                                                                           <---------AHL20(2)                                                                                      <---------AHL20(2)                                                                                      --------->AHL20(2)                                                                                     --------->AHL20(1)                                                                                     --------->AHL20(2)                                                                                --------->AHL20(2)---                                                                              --------->ANAC58   ----                                                                   --------->MYB52(1)<---------AHL20(2)                                                           ----------->TBP--------->ANAC58--------->AHL20(2) ------->TOE2(3)       ----------->TBP               <---------RAP2.6(3)  --------->ANAC58<---------AHL20(2) ------AHL20(2)      <-----------TBP         ----------->TBP       ---------->DOF2   <---------AHL20(1) >TEIL     ------------>CBF           --------->ANAC46     <---------AHL20(2) --------->ANAC58   ----   ttcttaaaccagagccaatagacatatatatcacacaaacacatcatatatatgccgatatataaaaaccaaaggcacacaagaaaataaaattaaatca  13157500                                                                              --------->LBD16                                                                            <---------LBD16                              --------->WRKY38(1)                          --------->MYB52(1)                             --------->DOF5.7(2)                     <---------At4g35610                  ------>MYB46(1)                                 --------->At4g35610                  ------>MYB83--------->WRKY12                    <---------At4g35610                  --------->ANAC46                               --------->ALFIN1         <<<<<<<<<TBF1 <---------MYB52(2)              <---------ATHB12   <---------ALFIN1      <<<<<<<<<TBF1  --------->TOE2(3)                 --------->ICU4--------->At4g35610 ----->ANAC46   <---------MYB46(2)                 ------------>CBF  --------->ZAT2 --------->CBF  --------->AtMYB61       <---------ANAC58  <---------YAB1 <---------MYB55(2) ----->ANAC58   --------->MYB46(3)      <---------ANAC46<---------ICU4   --------->MYB46(3)--------->WRKY18(1) ----->ANAC58  --------->ANAC46         <---------ANAC58--------->YAB1 --------->PCF2     <----------   cacaattcttcttcttcaccaaaccacaaacgttgacaacttgtgtgagtttttgcaatgatgagaggtgctgctcccaccggagtagtatcggtcatgg  13157600            <-----------RAV1(1)                                   <---------ALFIN1        <---------ANAC58                                 <---------ICU4      <---------YAB1                                  <--------HAHB4                  <---------ICU4    -------->HAHB4                                    <---------ICU4     ---------->DOF2      <------    --------->YAB1                                    --------->ATHB12--------->HSFB2a(2)     -------   <---------YAB1                                    <---------YAB1   <---------HSFB2a(2)     -------  <---------TOE2(3)                                  --------->ICU4  --------------------->WRI1 --------->YAB1----------->GT1                    <-------TEIL   --------->MYB46(3)  --------->ICU4 -HVH21 <---------ANAC58                       ----------->GT1  -------->P      ----------->GT1   ttttaatgatacttgtgttgttaaaacaaatagagagtgctagtgcgaatggttcatcattagggctaccacctagaaagttttgtaatatttatcaagg  13157700         ----------->HVH21   <------MYB46(1)                                                                          <<<<<<<GRF7   <---------ANAC46                                                                         ---------   <------MYB83                                                                            <---------  --------->MYB59  <-----------GT1                                                        ----------- ---TOE2(3)    <-----------ARR10                     XXXXXXXXXXXXXXXXXXXX>MIR2111B*    <------NtERF2 -->ANAC58     <---------ARR11(3)       <---------ICU4        ----------->GT1    <---------ATHB12 -->ANAC58--------->YAB1      <---------YAB1    <----------DOF2    <-----------GT1   --------->ETT(2)   aagttgggtctatgacaaatcttaccctctctatgattccaagaattgccctttcatcgagagacagtttaactgcaagtccaatggtcgccctgacagc  13157800                             <--------P                            <-------GAMYB                            <---------MYB52(1)                           --------->LBD16                                                     ------                         <---------LBD16                                                      <------ZmHOX2a(2)                        --------->MYB52(1)                                                   --------                        ------>MYB46(1)                                                      --------                        ------>MYB83                                                         <-------                      --------->AtMYB61                                                      --------   --------->TOE2(3) --------->HSFC1(2)    <---------At4g35610            <-----------GT1    <------- ->DOF2              --------->HSFB2a(1)   <---------ZAT2       <---------TOE2(3)<-----------GT1    < --HVH21             <---------HSFC1(2)  <-----------RAV1(2)<----------DOF2<---------TOE2(3) <------- >HVH21              <---------HSFB2a(1)--------->LBD16<----------DOF2 --------->YAB1       <--------   gagtacctcaagtatcgatggcaaccttccggttgcaatctccccaggtgattccatcttttctttatggtatttataacgtttttcgatatgtagatct  13157900          <----------DOF2      <-----------GT1    <----------DOF2 <---------ANAC58 <---------ANAC58 >ZmHOX2a(2)           <-----------GT1 ->AGP1 <-----------------AGL1 ->ARR14(2)         --------->ANAC58 --AGP1<-----------GT1 ------->TEIL ->ARR11(3)         ----------->GT1                      <---------ZAT14 --ARR11(3)         --------->ANAC58                     --------->ZAT14 ---------ZAT18<---------TOE1(3)               --------------->AtSPL8 --ARR14(2)    <---------TOE2(3)              <---------YAB1      <------ZmHOX2a(1) -CCA1(2)<---------------AGL15    ----------->GT1    --------->ZAT6                            ------   agtgcgttttaacttttaaggcatgtaactagtcataggtgaattgctatgagtaccactatacttcaggacgacttgggcatcaactagcattgtatcg  13158000                                                                    --------->ATHB51                                                                   <---------YAB1                                                                --------->AHL20(2)                                                                --------->ICU4                <------                                                             <------ZmHOX2a(1)             <---------                                                          --------->YAB1              <----------DOF2                               <---------ANAC58       <---------AHL20(2)        --------->ARR14(2)                               <---------ANAC58       --------->AHL20(2)        <---------ARR14(2) ----->GT1           <----------DOF2    <XXXXXXXXXXXXXXXXXXXXXMIR402--------->ATHB12 <---------DAG2   gaaaatttcattttcaaaaacgtctttagtatttcttgagggggattaataggtttttaattaggatttattattggattcaaatccccttttatgtcgc  13158100  Previous    Next  AGI:  At2g30900.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G42570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69941.1); contains InterPro domain Protein of unknown function DUF231, plant (InterPro:IPR004253) Range:  from: 13157561    to: 13159494    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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