Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <---------ETT(2)               <----------ID1                                                        --------->ETT(2)               ----------->GT1                                                  --------->At4g35610              ----------->GT1                                                   <---------At4g35610         --------->AHL20(2)                 ---------->DOF2                   --------->REM1(1)       ----------->GT1               ---------->DOF2                     <---------ARR11(3) <--------      ----------->GT1               --------->AHL20(2)           ----------->GT1----------->RAV1(2)  --------->YAB1<------ZmHOX2a(1)--------->YAB1           ---------->DOF2--------->ARR11(3) --------- -------->AHL20(2)        <---------ZAT6  --------->CCA1(2) --------->DAG2 --------->TOE2(3)---------   aaaataataagttaaataggaaaaaatagtcttaaaaataaaagataaaagagaaatttgaaaaggctagtgaaataccttcatctgtctccagtattct  13118700                                                                    --------->ANAC58                                                                    --------->ANAC58                                                                 <---------SPL7                                                                <---------DEAR3(2)                                                                --------->MYB55(2)                 <-----------HVH21                              <---------MYB46(3)      --------->At4g35610                                  <---------LBD16      --------->ARR11(3)      <---------At4g35610                              --------->ARR11(3)      --------->YAB1 -ARR14(2)   --------->ANAC46                ------->TEIL------>ZmHOX2a(2) <---------AHL20(2) >ARR14(2) --------->YAB1                   --------->MYB52(1) <---------DEAR3(1) >ZAT14    --------->ANAC46     --------->YAB1    <----------DOF2<-------GAMYB<---------YAB1   ccatagggagcaaacacaacatcacgtccaccattcataagcccatgaacggcttttgatctcgggcggttcgcaaatttatgatcatgtgttttcaata  13118800                                                                         ----------->RAV1(2)                --------->LBD16                                         ------->TEIL              <---------LBD16                                         <---------SPL7          <----------DOF2                                            <---------ANAC58          <-----------HVH21              --------->ANAC58            <---------ANAC58 <---------PCF5        --------->At4g35610     <---------ARR14(2)              --------->ALFIN1      --------->TCP20     --------->At4g35610        <---------ZAT14              --------->ATHB12        ----------->HVH21     <---------At4g35610        --------->ARR14(2)     <------ZmHOX2a(1)--------->SPL7<---------PCF2     <---------ZAT2 <------ZmHOX2a(1)    --------->ANAC58   <---------YAB1--------->TOE1(2)     -----   cctcttgagctgcttcaccggaggagactacgagtatagggacacggccaaaatgaaggagcatgagtggtccgtacctgagactgagggaccggaggga  13118900                                            <---------ATERF1(1)                               -------                                            <---------HSFB2a(1)                      --------->MYB52(2)                                            <---------HSFC1(2)          <----------DOF2       <------                            --------->GLK1(1)                    <------MYB83       <-------TEIL                            <---------GLK1(1)                    <------MYB46(1)   <---------ARR14(2)                           --------->HSFC1(2)                   <---------TOE1(2)<---------DEAR3(2)                           <---------HSFC1(2)                   --------->MYB111(1)<---------MYB52(1)                   <---------MYB46(3)       --------->HSFC1(2)  --------->MYB59 <---------ANAC58                 <---------ZAT2             --------->HSFB2a(1) --------->MYB46(2)<-------GAMYB                 ----------->RAV1(2)       --------->ANAC58    <--------P<---------ZAT14     <------ZmHOX2a(1)                 --------->ZAT2    <------ZmHOX2a(2)           <---------MYB55(1)<---------MYB46(3)                 <---------At4g35610    --------->LBD16      <---------MYB46(3) <---------DEAR3(1)       --------->ALFIN1  <---------AtMYB61 --------->ANAC58  --------->MYB55(2) <---------ANAC46     <------ZmHOX2a(1)--------->ALFIN1<---------LBD16       <---------AtMYB61   <---------RAP2.6(2)     =====================================HOX2a_HOX2a    <---------AtMYB61    ------------>AtMYB77 --------->ALFIN1--------->At4g35610 --------->MYB52(1)  --------->ALFIN1--------->ZAT14   <---------TOE2(3) ---->MYB52(1) <-----------RAV1(2)<-----------HVH21--------->AtLEC2 <-------TEIL<---------ANAC58   acggtgaggatggaggctcagctggtggaggtttccgatcaccggaagcctccatggagatggtggtaggttcactttagtggcggttcgtttgaggaat  13119000                                                           --------------->AGL15                                                           <---------------AGL15                                          --------->ARR14(2)                                          --------->ARR11(3)                                          <---------ARR11(3)                                      ---                                          <---------ARR14(2)    <---------ANAC58                  <--                            <---------MYB52(1)      <---------YAB1                                <--                           <-------GAMYB  <---------GLK1(2)==========================================                          <---------MYB46(3) --------->ANAC58   <---------ANAC58                <----                         <---------------------WRI1--------->ARR11(3)                          <----- -->ARR14(2)       <---------YAB1   ---------->DOF2<---------ARR11(3)                   *TSS  ------- ---ARR14(2)  ----------->GT1---------->DOF2 --------->ANAC58   <---------ANAC46     ---------->DOF2   cgcctcagcaagagaagggttatgagggtcgttaagcacaaagagatactcaatatcatttccatttcttgaatattgctcatgtaagaaagtgtttgat  13119100                                   ----------->GT1        <-----------GT1       <---------AHL20(2)                                                    -       <-----------GT1      <-----------TBP                                                         -   --------->ICU4         <---------------AGL15                                                     < -------->GT1             --------------->AGL15                                                    -- ----MYB83               <-----------------AGL2 ----------->GT1                                   <-- ----MYB46(1)          --------->ANAC58 <------------CBF                                      ------- =========================================MADS_MADS                                           <------ -----WOX13(1)         --------->ANAC58--------->ATHB12            <---------HSFB2a(2)        <------ -------CBF          <---------AtLEC2  --------->MYB52(2)          --------->HSFB2a(2)        ------- -->ATHB12     <---------GLK1(2)   <---------ZAT6          ----------->RAV1(1)        ------------>CBF   tggtgatttttaactcatattctgcatgctatttatagggttaattggaagagtttattagcgacagttttggaacccatcgttttctgtcaatagtgca  13119200                                ---------->DOF2                           <----------DOF2        <---------AHL20(2) <---------------AGL15        --------->AHL20(2) --------------->AGL15                         <---------ARR11(3)       --------->AHL20(2)------->TEIL                                    --------->ARR11(3) -------->ANAC58       --------->ZAT14                                  <---------CCA1(2) -------->ANAC58       <---------ZAT18                     --------->MYB52(2) ---------bZIP60(1)    <---------ZAT14                   <--------P    --------->ARR11(3) ------->SPL7          --------->ZAT18        --------->ARR14(2)       <---------AHL20(1) ----ZmHOX2a(1)      <---------------AtSPL8   <---------ARR14(2)--------->HSFB2a(2) -->ZAT14         <---------ANAC46     --------->ICU4    <---------MYB52(1)                        -- ---ZAT18         <---------ANAC58   --------->YAB1    ----------->GT1 --------->AHL20(1)          <- ---ZAT14         <---------ANAC58----------->GT1 ------>ZmHOX2a(1)    <---------ARR11(3)        ---- -->ZAT18      <---------MYB52(1)--------->DAG2<------ZmHOX2a(2)<---------HSFB2a(2)      <----------DOF2   ggacgtcaattttattcgttgtttgtgtactttgaaaagtaataatccgatcctatatggttagttttggaaatatatcttgtttttttttcttttaagt  13119300                                                                                               ------                                                                                               <-----      <---------AHL20(1)                                                                       ------      --------->AHL20(1)                                                                      -------      --------->ARR11(3)                                                                    ---------    <---------AHL20(2)                                                           ------->TEIL--------   --------->AHL20(2)                      <---------CCA1(2)                  --------->ANAC58-------  <---------YAB1                       ----------->GT1                        <---------MYB52(2) ------->ICU4                        --------->ZAT14                          --------->ANAC58------- --------MYB52(1)        --------->AHL20(2)--------->GLK1(1)          <---------ICU4        <-------- ------->GT1    <-----------GT1      <---------ZAT14              --------->AHL20(2)   <---------YAB1   cgttattatatattgatttttcttcataaaaatacacagtatagtatatccaaaaaaaaacacttccattaactatgaccacgaacatcattttagccga  13119400  --------->YAB1                            ----------->GT1     <---------AHL20(2) <---------YAB1                            --------->DAG2   --------->AHL20(2) >NtERF2                                  ---------->DOF2   <---------AHL20(2)          <----------DOF2 ----RAP2.6(3)                       <---------------AGL15 <---------AHL20(1)--------->ANAC58 --->ORA47(1)                        --------------->AGL15 --------->AHL20(1)--------->YAB1 ---->HVH21                      <---------ZAT14           --------->AHL20(2)--------->ANAC46 >At4g35610                      --------->ZAT14           <---------AHL20(2)--------->ANAC58 ->DEAR3(2)                    <---------------AtSPL8 ------>ZmHOX2a(1)      --------->ANAC55(2) -->RAP2.6(2)                 <---------ANAC46       --------->TOE2(3)       --------->ANAC55(1) -->DEAR3(1)       <---------YAB1--------->ZAT18  <---------ARR11(3)     <---------AHL20(2) -At4g35610    <---------AHL20(2)<---------ZAT18  --------->ARR11(3)     --------->AHL20(2)     -----   cctatgatagtagttatatttttgattctattttgtgtactaagaaaagtaatatcctaaatttattttttggaattaaacgtaatctttctttttaaga  13119500                                 <---------AHL20(2)                                 <---------ICU4                                <---------ATHB12                              --------->YAB1                          <---------YAB1                        --------->YAB1                       <---------YAB1                     --------->YAB1                     <---------ICU4                     --------->ATHB51                     <--------ATHB1                     <--------HAHB4                     -------->HAHB4                    --------->ICU4                                          <---------YAB1          <                    --------->AHL20(2)                                    <-----------GT1           -                    <---------ATHB51       --------->YAB1         ----------->GT1            --------                    <---------YAB1         ----------->GT1     ----------->GT1            --------->YAB1 ---->ARR11(3)    --------->YAB1--------->AHL20(2)      ---------->DOF2--------->YAB1<---------YAB1<-   actagaattcaaatattgaataataattatactaataaatatcaatagttatacaagttaaagaagagttgaaaaataactattgatatgaataataaac  13119600  Previous    Next  AGI:  At2g30770.1    Description:  CYP71A13 (CYTOCHROME P450, FAMILY 71, SUBFAMILY A, POLYPEPTIDE 13); indoleacetaldoxime dehydratase/ oxygen binding. Identical to Cytochrome P450 71A13 (CYP71A13) [Arabidopsis Thaliana] (GB:O49342); similar to CYP71A12 (CYTOCHROME P450, FAMILY 71, SUBFAMILY A, POLYPEPTIDE 12), oxygen binding [Arabidopsis thaliana] (TAIR:AT2G30750.1); similar to CYP71A18 (cytochrome P450, family 71, subfamily A, polypeptide 18), oxygen binding [Arabidopsis thaliana] (TAIR:AT1G11610.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67678.1); contains InterPro domain Cytochrome P450, E-class, group I; (InterPro:IPR002401); contains InterPro domain Cyto Range:  from: 13116871    to: 13119088    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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