Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               <------ZmHOX2a(1)                                                                 <-----           --------->ANAC46                                                                    ------          <---------LBD16                                                                      <-----        -------->P                                                                             <-----     --------->TOE2(3)                           --------->ANAC58                              <-----     <---------DAG2                 <---------MYB59                 --------->YAB1       <---------AHL20(2)     <---------MYB59                --------->TOE1(3)  --------->DAG2  <---------ARR14(2)--------->AHL20(2)    ----------------->AGL1          --------->TOE2(3) ---------->DOF2  --------->ARR14(2)<---------AHL20(1)   <---------ARR11(3)     <----------DOF2        --------->ANAC58  <<<<<<<<<ARR2         --------->AHL20(1) -----WRKY38(1)          --------->TOE2(3)       --------->ANAC46--------->WOX13(1)     --------->AHL20(2)   aacaataccttaccaggaatacttctacctttaagaaacctaaacaaaaacaagcaaaaagtcgagacaatcaaatctgaaaccctgctaataaatttcg  13095900                                                                               <---------WOX13(1)                                                                             --------->ATHB12                                                                          <------MYB83                                                                          <---------At4g35610                                                                          <------MYB46(1)                                                                         <---------AtMYB61                                                                         <---------DEAR3(1)                             ------>ZmHOX2a(2)                         <---------MYB52(1)                            --------->CCA1(2)                         --------->LBD16                            <------ZmHOX2a(2)                        <---------HSFB2a(2)                           <---------AGP1                            <---------LBD16                           --------->AGP1                           <---------LBD16      --------->ANAC46     --------->ARR14(2)                      <------ZmHOX2a(2) ----ANAC58                <---------ARR11(3)                     --------->ARR14(2) --->ANAC55(2)             <---------ARR14(2)                     <---------ARR14(2) ----ANAC55(2)        <-----------GT1       <---------GLK1(1)   --------->ANAC58 ----ANAC58   --------->MYB52(1)     --------->ARR11(3)         --------->ANAC58          <---------YAB1 ----ANAC46--------->YAB1  --------->ARR11(3)      --------->CCA1(2)------>ZmHOX2a(2)<---------ICU4   tgattcacaagtagcataacgaagttacagatctaagaagacattgaaatcagatataagaaatgcacgatccgggaggtgattgactcattacccttgg  13096000                   ------->TEIL               <---------WOX13(1)             --------->ATHB12      <---------ANAC46                 <-----------RAV1(1)                                 <---------GLK1(1)      <---------ANAC58              <----------DOF2                                        --------->GLK1(1)      <---------ANAC58   <---------GLK1(2)                                              <---------YAB1   acgttcttgagtgtttgattgaatctagaatcgtcgcgcttttgttgttcgtcttctctcttctccatggtttctgtttctgtttcagttctgatttccg  13096100                <---------ANAC58                                               <----------DOF2                <---------ANAC58                     --------->CCA1(2)        <---------ANAC58         ------->GAMYB               <---------ARR11(3)           <---------ANAC46      ----------->RAV1(1)            --------->ARR11(3)           <---------ANAC58     --------->ANAC46         ---------->DOF2  <---------WOX13(1) <---------ANAC58   <---------HSFB2a(2)<---------HSFB2a(2)    --------->ATHB12    <---------LBD16   --------->HSFB2a(2)--------->HSFB2a(2)   <---------YAB1   <---------GLK1(2)<---------ANAC58  <----   atgttccacaacagagcttcttgcccagaagtgaaagaagatagttttgattgagaaatgagagaatttcgggttcgattgctttccatcgatttcaagg  13096200                                  --------->AHL20(2)                                  <---------AHL20(2)                             --------->AHL20(2)                           ----------->GT1                          --------->DAG2                      --------->ANAC58                   <----------ID1--------->YAB1                --------->DAG2   <---------AHL20(2)         ----------->GT1 ---------->DOF2    --------->HSFB2a(2)                        ----------->GT1       ---------->DOF2--------->ANAC58    ----------->RAV1(2)                   ------->TEIL        < -----ARR11(3) ---------->DOF2   --------->AHL20(2)                       <---------ATHB12    -------   tctaaactctaaagtaaaaaagcgacgaaaagtaattaaaatccatctggagcaaaatttgattttgtaatcgcaaatgatgcatttaggcgttaatcta  13096300                                      *TSS                                                     ------                                    --------->DAG2                                            <------ -----------GT1                    ---------->DOF2     <----------DOF2                      --------- -->TOE2(3)                  ----------->GT1     --------->ANAC46                       <-----------GT1   aatcactccttgaatttgtattggttctcttcggtaataaagtagttttcaaggcaactttgtttgatatagtttgggcataaaaaatgtttaccagtca  13096400                                                                         --------->ARR14(2)         <                                                                   --------->YAB1                   -                                                               <---------AHL20(2)                   -                                                           <---------AHL20(2)                       -      --------->ANAC46                                  <---------ARR11(3)                         -- --------->ZAT6                                        <------ZmHOX2a(1) <---------ARR14(2)        -- --->YAB1       --------->MYB46(3)             <----------DOF2 --------->AHL20(2)                  <- ---ATHB12    ----------->RAV1(1)         <----------DOF2<---------RVE1(1)                         <- >ANAC46   --------->ANAC46      <---------YAB1<---------------AGL15----------->GT1    ----------->GT1   taaacactactcaacacaacaaatgaacgaagtatatgattactcttttcttttacaggatttttttaattagaaaatactcaaatagcctgaaaaaaca  13096500          <------MYB83          <------MYB46(1)        <--------P                                          <-----------HVH21      <---------ZAT6                                       --------->WOX13(1)      <---------REM1(1)                              <---------MYB52(1)  <---------YAB1                                    --------->TOE2(3) ---------ICU4                                      <-------GAMYB ------->ATHB1                                     ----------->GT1                      ------->TEIL -------->ATHB12                                   ------>ZmHOX2a(2)                    --------->GLK1(2) -------->ATHB51                                  <------ZmHOX2a(2)                     <---------ARR11(1) ------->ICU4                                    <---------ARR11(3)           --------->YAB1 ------->AHL20(2)            <----------DOF2     <---------ARR14(2)          --------->ICU4 --------ATHB51<---------TOE1(3)                 --------->ARR14(2)         <---------KAN4(2)     <-- --------AHL20(2)     >>>>>>>>>EIN3              --------->ARR11(3)    ---------->DOF2 <---------ARR14(1)   aattattagtgtaggttaagctatacattgactttctctcttattgtcgaagatcgttaatctatcacagagggaaagaatgatcaaacgaatctatttt  13096600                                                                             <---------ATHB12                                                                            --------->ANAC58                   --------->AHL20(1)                                       --------->ANAC58                   --------->AHL20(2)                                      --------->WOX13(1)                   <---------AHL20(1)                                    <------NtERF2           <---------YAB1                                               --------->LBD16       <---------ANAC58                                                <---------RAP2.6(2)       <---------ANAC58                                               <---------LBD16 -------AtLEC2    <---------CCA1(2)                             <-----------------AGL1   gcataaatggcttcttattcatatattagtcagactatgttttctcttgtttaccgaaatcaactgttcaaatgcggcaatcaaggcaatgagatgggtc  13096700                                                    <---------ALFIN1                                              <---------HSFB2a(2)                                              --------->HSFB2a(2)                                             <---------ANAC46                                             <---------ANAC58                                             <---------ANAC58                                         <-------GAMYB                         <---------AtLEC2                                        <-----------RAV1(1)      <-----------GT1       <-----------RAV1(2)                              <---------GLK1(2)    --------->MYB46(3)       <----------DOF2  --------                  <------ZmHOX2a(2)<<<<<<<<<TBF1 --------->ARR14(2) --------->WOX13(1)<------NtERF2   tctctgcgtccatgcgctcgatcactcttctagcttcttcttctgttgctggaaccacatttcttattttcaatccatctttcatggcctcaggtctcac  13096800  Previous    Next  AGI:  At2g30710.1    Description:  RabGAP/TBC domain-containing protein. similar to RabGAP/TBC domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G04830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46238.1); contains InterPro domain RabGAP/TBC; (InterPro:IPR000195) Range:  from: 13092963    to: 13096338    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g30720.1    Description:  thioesterase family protein. similar to thioesterase family protein [Arabidopsis thaliana] (TAIR:AT5G48370.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46320.1); contains InterPro domain Thioesterase superfamily (InterPro:IPR006683) Range:  from: 13096446    to: 13098764    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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