Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      ------->MYC2                                                                                    <-------MYC2                      ----------->GT1                                               ------->MYC3                 --------->YAB1                                                   ---------->TaMYB80                --------->ICU4                                                 --------->ANAC46                <---------YAB1                                          --------->YAB1       --------->ATHB51                                                 <---------ICU4       -------->ATHB1--------->DAG2                                     <--------HAHB4       --------->ATHB12                                                --------->ICU4      <---------YAB1---------->DOF2    <---------HSFB2a(2)             <---------YAB1    <---------------AGL15           <----------DOF2                  --------->YAB1 <-------MYC3 -----YAB1 --------->YAB1 <-------TEIL --------->HSFB2a(2)       <-------TEIL  --------->ANAC58 --->ARR11(3) --------->YAB1     <---------TOE1(3)     --------->ARR14(2)      --------->ANAC58 ----ARR11(3)<---------YAB1     <-----------GT1        <---------ARR14(2) <---------YAB1      <------   catatactattattgataataataaagttacatttaagcttttagaagctatatgcatatacttgcatacatcatcattatacgcatatgcttcactaat  13051600                                                           <---------ANAC55(2)                      <----------DOF2             <----------DOF2                    <----------DOF2     --------->AHL20(2)   <---------YAB1      --------->ICU4               --------->ANAC58   ------- ---ICU4         <---------AHL20(2)     <---------ARR11(3) ----------->GT1 --------->ANAC58  <-------   tccacattttaaaacaaatttaaactttgtgattcaattcaagatgtaatgactttcaaatatgtaaaatggttccaacgcattactctttggttatctt  13051700                                                        --------->ANAC58                                                        --------->ANAC58                                                        --------->ANAC46                                                      <---------ALFIN1                                                     --------->ZAT14                                                    <---------ALFIN1                                --------->ANAC58    --------->AtMYB61                                --------->ANAC46   <------NtERF2                                --------->AtLEC2   --------->ANAC58                                --------->ANAC58   --------->ANAC58                               ------->MYC3       ------>NtERF2                           -----------                               <-------MYC2 <-----------RAV1(1)                    --------->ARR14(2)   <------ZmHOX2a(1)           <-------MYC3 <---------ANAC58                       <---------ARR14(2) --------->MYB59       --------->bZIP60(2)  <---------ANAC46                    --------->ETT(1) -->TOE2(3)            --------->ANAC46     --------->ALFIN1                <---------AtMYB61      <- --YAB1     ---------->DOF2    ------->MYC2 <---------ANAC58            <---------YAB1   --------->MYB46(3)   agttaggactctcttaaagagagacacatcacacatgcaacaagttgtgtggcaccacacacaagaagatggtcatctttggtcggattcaacaacacaa  13051800                                           --------->ZAT6                         --------->AHL20(2)     --------->TOE1(3)                     <---------ALFIN1              --------->YAB1     --------->TOE2(3)                 <-------GAMYB                    ------->TEIL              ---  <---------ALFIN1                    --------->MYB52(2)              ------->GAMYB--------->AHL20(2) >RAV1(1)                      --------->YAB1--------->ANAC46        --------->MYB46(3)           --- ----------GT1                <---------ATHB12     --------->ATHB12  <---------MYB52(2)       -------   ttttccaccttaaactcatccgatttcatcaaatcatagttcgttacactccttgattagtctagttttcaacgaacataaccattaaaaaaaaaaccat  13051900                                                                   ------------>CBF                                                                 <---------ANAC58                                                           -------->P                                   --------->YAB1          ------>MYB83                             --------->ZAT6                ------>MYB46(1)                        --------->ANAC55(2)               XXXXXXXXXXXXXXXXXXXX>MIR839                        ----------->GT1                  <---------MYB59 ------>ANAC58          <---------ANAC55(2)              --------->AtMYB61 ------>ANAC58          --------->TOE2(3)             <-----------GT1                       --------- -->TOE1(3)           --------->MYB52(1)     --------->TOE2(3)   <---------ANAC58       ------>ZmHOX2a(1)   aagcattctccaaaaaaccaaaaataccgtaatactatcaaaacaaaccatagttttgaccaaccttgcttcaatccccattttctcatcctacacaaaa  13052000                 --------->ANAC46            --------->ANAC46                ----------->GT1                 --------->ANAC58       <-----------GT1                     --------->DAG2       ----           --------->AHL20(2)  --------->MYB52(1)  --------->YAB1          ---------->DOF2    -------      <---------ATHB12       --------->TOE1(3)    ----------->GT1--------->YAB1        --------->DAG2  ------------>CBF           --------->TOE2(3)   ------------------------>ANAC81      ---------->DOF2 >ANAC46*TSS     --------->ANAC58--------->HSFB2a(2)    <----------ID1  --------->TOE2(3)    <-------   ccatttcaatcgattaaacactcaaacaaaaccttacagaattatctacacaatgaaaaaaacaaaatcaaaatccataaagtaaacaaaaagttatgat  13052100                                              ------>MYB46(1)                 <-------TEIL                    --------->ANAC58          <---------ARR14(2)        ------>ZmHOX2a(1)                    --------->ANAC46          --------->ARR14(2)       --------->TOE2(3)      --------->YAB1--------->ANAC58          ------>MYB83       --------->ANAC46     <---------ATHB12                  --------->ANAC58         <---------LBD16             ---------   --------->WOX13(1)                  --------->ANAC58       --------->TOE2(2)             --------- ----->AHL20(2)    --------->ZAT18   ---------->DOF2         --------->MYB46(3)--------->YAB1   <---- -->YAB1      ---------->DOF2      --------->ANAC46     XXXXXXXXXXXXXXXXXXXX>MIR162A/B ------>ZmHOX2a(1) --YAB1---------->DOF2 --------->AtMYB61  ------->TEIL<-------TEIL--------->LBD16     --------->TOE2(3)   aaaatcaatcaaagctaaaagcacaccaatacaatacacaaaagcacctatccacatccattaacctccgcatccttacattcgtaatcctaaattataa  13052200                                                                  <---------ICU4                                                                 <---------YAB1                                                               --------->YAB1  --------->YAB1                                                          --------->ZAT14     <---------ATHB12  <---------ETT(2)                                      --------->LBD16      ------>MYB46(1)  --------->ETT(2)   <---------MYB46(3)             <---------ARR14(2)       ------>MYB83 >YAB1            --------->MYB52(1)                --------->ARR14(2)      --------->WOX13(1) >AHL20(2) --------->AHL20(2)       --------->TOE2(2)<------ZmHOX2a(2)    --------->MYB46(3) -------GT1<---------AHL20(2)      ----------->RAV1(2)------>ZmHOX2a(2) <-----------GT1   accgtcgatagatttaaatccaacggttgaaattcaaacctgagttgatacaccgatccgagtactcatcattttaaccaatcagagaagagattacaaa  13052300                                                                             --------->ANAC58                                <---------ICU4                            ----------->HVH21                               <---------YAB1              <---------ICU4 --------->DEAR3(1)                             --------->YAB1               ------>ZmHOX2a(1)------>NtERF2                         <---------AHL20(2)         ------>ZmHOX2a(1)     --------->ANAC46               <---------At4g35610             <XXXXXXXXXXXXXXXXXXXXMIR854A-E--------->ANAC58    <---               --------->At4g35610         --------->ARR11(3)       <---------GLK1(2)            <---   ctctgtctcataaacacatctgactatataaacatcattcccatagttcttctccttctcctcatcacaaaattctccgacgcattacattttcttccga  13052400                                                                              <---------ZAT2                                                                              --------->ZAT2                                                                              <---------At4g35610                                                                              --------->At4g35610                                                                             --------->ARR14(2)                                                                    --------->WRKY12        ---------                                                                    --------->WRKY38(1)  --------->MYB52(1)                                                                  <-------GAMYB      --------->ARR14(2)                                                             --------->MYB46(3)  ------>NtERF2                                                             <---------MYB55(2)--------->ATERF1(1)           <------ZmHOX2a(2)                              --------->TOE1(2)  <---------ARR14(2)         <---------GLK1(1)                   <------ZmHOX2a(1)   <---------MYB46(3)  <---------ARR14(2) ---ZmHOX2a(2)                   --------->ARR11(3)  --------->HSFB2a(1)    <------ZmHOX2a(1)-------- ------ATHB12   --------->GLK1(2)<---------ARR11(3)  <---------HSFB2a(1) <-----------RAV1(2)------->GAMYB   tcaatacagagagatcagtttctgagagagaagaagatgtctatagaggaagaaaacgttccaacgactgttgactcaggagctgccgatacaacggtga  13052500  Previous    Next  AGI:  At2g30620.1    Description:  histone H1.2. Identical to Histone H1.2 [Arabidopsis Thaliana] (GB:P26569); similar to histone H1, putative [Arabidopsis thaliana] (TAIR:AT1G06760.1); similar to histone 1 [Malus x domestica] (GB:BAD00018.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Histone H1/H5; (InterPro:IPR005818); contains InterPro domain Linker histone, N-terminal; (InterPro:IPR003216); contains InterPro domain Histone H5; (InterPro:IPR005819) Range:  from: 13052008    to: 13053588    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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