Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                               --------->ALFIN1                                                                       --------->ANAC58                                                                       --------->ANAC58                   <---------------AGL15                             --------->MYB52(1)                   --------------->AGL15                            ----------->HVH21 -------->WOX13(1)----------------->AGL1                            --------->At1g77200 -------ATHB12    ----------------->AGL2                            --------->DEAR3(1) ---->WOX13(1)    ----------------->AGL3                           --------->DEAR3(2) ->ARR14(2)       <-----------------AGL3       --------->At4g35610 --------->MYB46(3)        -------- --ARR14(2)  --------->LBD16---------->DOF2    --------->LBD16<---------At4g35610            <------- -CCA1(2)  ----------->RAV1(2)             --------->ARR14(2) --------->At4g35610        <---------At4g35610   atcaatctaacatccctgagaccaaaattagaaagcgaattgaagaaaccgcagaagtagaagaagctcaccgacggaagtgatgctcttgagccgattc  13030900                                                          ------>NtERF2                                                       ------>ZmHOX2a(1)                                                       --------->At4g35610                                                   --------->ARR14(2)                                                   <---------ARR14(2)                     <----------                                                   --------->GLK1(2)                      --------->ARR14(2)                                                  <---------GLK1(2)                    <---------ANAC58                                               --------->YAB1                          --------->ANAC46         --------->MYB52(1)                   ================HOX2a_HOX2a              <---------ANAC58 --------->ANAC58                             <------ZmHOX2a(2)             <-------TEIL  <---------ARR14(2) --------->ANAC58                            <---------ARR14(2)      ------->TEIL      --------->ANAC55(2) ->ARR14(2)    <---------At4g35610           --------->ARR14(2) ------->GAMYB  <---------YAB1 --ARR14(2)    --------->At4g35610          <------ZmHOX2a(1)  --------->MYB46(3)     <-------TEIL   gaaacgaaaacaatcggagctaaaacagataacaatagcagcgagaggatcagaatcctctgccaacgacgaacttgattcatcaatgtgcgtaacttct  13031000                                                                                                -----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                              -------                                                                                              -------                                                                                             --------                                                                                         <---------LBD16                                                                                       <------ZmHOX2a(2)                                                                                       --------->GLK1(1)                                                                                       <---------GLK1(1)                                                                                      <---------AGP1                                                                                      --------->AGP1                                                                                      --------->ARR11(3)                          <---------MYB52(1)                                          <---------ARR11(3)                         <-------GAMYB                               --------->HSFB2a(2) <---------HSFB2a(2)                 <---------AHL20(2)                             --------->KAN4(2)     --------->ARR14(2)             <---------AHL20(2)                        >>>>>>>>>TBF1 <---------HSFB2a(2)------>ZmHOX2a(2)            <---------AHL20(1)  <----------DOF2     >>>>>>>>>TBF1   <---------LBD16   <---------ARR14(2) -ARR10    <---------CCA1(2) <---------ANAC46  --------->ANAC46<----------TaMYB80    <---------CCA1(2)   cagagaacgcttcatatattttatctccgttgcgctttaatcgttctccacgaagaagaagaagcacattcccagagggaagaacacagatctcggagat  13031100       --------------->AGL15       <---------------AGL15  <---------At4g35610 ---->GLK1(2)                                        <---------ARR14(2) ----GLK1(2)                                         --------->ARR14(2) --->ARR14(2)                                        <---------GLK1(2) ----ARR14(2) --------->ANAC58             <---------TOE2(3)         <---------ARR14(2) -->HSFB2a(1) --------->ANAC58             <---------TOE1(3)         --------->ARR14(2) -->GLK1(1)   --------->ANAC46     --------->At4g35610              <------ZmHOX2a(1)          <----- --->ARR10  --------->MYB46(3)     <---------At4g35610--------->GLK1(2)               --------->GLK1(2)   tctctgcttcttcaacaagcaattgaagaaaacgatgagcagattagggttttcagattcttctgcaataggattcgataaatgcgagagtctgtttcta  13031200                <-------TEIL                                                               --------->YAB1               --------->GLK1(2)                                                        <---------ICU4        <---------LBD16                                                              *TSS<-----------TBP      <---------ARR14(2)                                         ---------->ID1    --------->AHL20(2)      --------->ARR14(2)     <-------PIF5                   <---------AHL20(2)     <---------AHL20(2)      --------->ARR11(3)     ------->PIF5              <---------AHL20(2)      <---------RVE1(1) <---     <---------CCA1(2)     ------>ZmHOX2a(1)         <----------DOF2          <---------GLK1(2)------ ------GT1    <---------ARR14(2)<---------AtLEC2 <---------At4g35610          --------->ARR11(3) ----   cgatttcatatctggagattcagagcttcctcgtgcatgtttagagacttctgctcttttattttttttcgcttaactcagattttttaatatttataaa  13031300                                                                 <---------ZAT18                                                                <---------ANAC46                                                              <---------ANAC46                                                             <------NtERF2                                                             <---------DEAR3(1)                                                           <---------ANAC46                                                           --------->DEAR3(1)                                                          ------>NtERF2                                                          --------->ATERF1(1)                                                          <------NtERF2                                                         <---------ORA47(2)                                                         <---------DEAR4(2)                                                         <---------ATERF1(1)                                                         <---------RAP2.3(1)                                                        <---------RRTF1(3)                                                        <---------RAP2.6(2)                                                        <---------RRTF1(2)                                                        <---------DEAR3(1)                                                        <---------RAP2.3(2)                      --------->ANAC46                 --------->ZAT18           <---------AHL20(2)                          <---------LBD16 <-------MYC2       <---------AHL20(2)                        --------->CCA1(2)     ------->MYC4       --------->AHL20(2)    <------ZmHOX2a(1)  <---------ARR14(2)     ------->MYC2        <---------ZAT14    ------->TEIL     <---------LBD16            --------->ARR11(3)     ------->MYC3        --------->ZAT14 ------ATHB12    <---------YAB1             <-------TEIL<---------RAP2.3(3) --------->ANAC58     <--- --->WOX13(1)   --------->AHL20(2)         --------->CCA1(2)------>NtERF2   --------->ANAC58     ---- -------->CBF   <-----------TBP   <---------TOE2(3)    <---------ZAT14 <-------MYC3 <-----------GT1 -   tcaatgtatttatttgatttttatacggagaggattaatgttgagatacagatatagtgcggcgcggtgtacatgtgctagcaaaattactagtttacta  13031400                                                                      <---------------AtSPL8                                                                      <---------------AtSPL3             --------->ATHB12                   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->YAB1            <---------YAB1                ------>NtERF2      <-------MYC3          <--------ATHB1         <----------DOF2                  ----------->RAV1(1)------->MYC3         <---------ATHB12   <-----------GT1      <---------ZAT6   --------->RAP2.6(2)<---------O2          --------->ICU4 ------TOE2(3)     <---------ANAC58   --------->ANAC58     <<<<<<<<<<BZIP12  <-----------HVH21      - ------->ARR10 <---------WOX13(1)     --------->ANAC46     <<<<<<<<<<ABI5   <---------ZAT6      ----- -------->CCA1(2)  <---------ANAC58   --------->ANAC58 ----------->HVH21<---------ZAT14        ------   agatttgacttcttttgattggcttagtggaaattctcccaagccaccatagatgttttgacacgttgatagaatgtactgtcaatgattttcaagagtg  13031500          <----------DOF2        <---------ZAT2        --------->ZAT2                                  <---------ARR14(2)     <---------At5g28300                    --------->ATHB12                     <---------LBD16    <-----------GT1                        --------->ICU4                       ----------->RAV1(2) -------->GLK1(1)                          <---------HSFB2a(1)              <-----------GT1        -- ------>GT1                    <------ZmHOX2a(1) <---------TOE2(3)     --------->ICU4             <-- --->ALFIN1      <----------DOF2  --------->MYB46(3)    --------->ARR14(2) <-----------GT1    <------   ggaaattcacagctttgtactttggagtttggaggaacaactggaatgtttgaggtcgaatttgggaattgaaatttttaacccctggatgagtttatat  13031600                     --------->ALFIN1      ------>ZmHOX2a(2)                                                              ---------->ID1    <---------ARR11(3)                                                 <---------AHL20(1)    --------->ARR11(3)<-------GAMYB                                    --------->AHL20(2)        <--- <---------WOX13(1)<---------ANAC58                                    <---------AHL20(2)       <---- ------->ATHB12    <---------ANAC46                       <----------DOF2   <-----------GT1    <----- -------AHL20(2)   <---------ANAC58         --------->AHL20(2)         --------->AHL20(1)     <------ ---YAB1     <---------YAB1        <-----------GT1 <---------YAB1     --------->AHL20(2)<---------MYB52(1)   ttgattgatctctctattatggggtgttgaatgttatttacaaaaaaaaaatagtcattgttttatggacgaataaattatctacttgtcgtttttttac  13031700                                                                       --------->ANAC55(1)                                                                       --------->ANAC58                                                        ----------->ARR10                                                        --------->MYB52(2)          --------->MYB52(1)                                                      <---------MYB52(1)          <---------MYB52(2)                                                 --------->MYB52(1)    --------->ANAC55(2)                                                 ------------>MYB.PH3(1)        --------->YAB1                                         --------->AHL20(1)            <---------ANAC55(2)                                         --------->AHL20(2)            --------->ANAC58  --------->MYB52(1)                  --------->YAB1  <--------P       --------->ANAC46            <- ------MYB59             ----------->GT1 <---------AHL20(2)           <-------TEIL--------->MYB46(3) -------------AGL1      <---------ANAC55(2)  --------->AHL20(2)     --------->TOE1(2)    ------->TEIL ----At5g28300    <-------TEIL     ------>ZmHOX2a(1) --------->At5g28300    <---------YAB1  --------- -----GT1--------->AHL20(2)       --------->TOE2(3) ----------->GT1 --------->TOE2(2)--------------->AtSPL3   cgaataacgcataaattagattcaatacggataattcctaaaataaaataaaaacggttagttcttctaacatacgttactataacaaacgtacttgacg  13031800  Previous    Next  AGI:  At2g30575.1    Description:  GAUT5/LGT5 (Galacturonosyltransferase 5); polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups. similar to GAUT6 (Galacturonosyltransferase 6), polygalacturonate 4-alpha-galacturonosyltransferase/ transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G06780.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22646.1); contains InterPro domain Glycosyl transferase, family 8; (InterPro:IPR002495) Range:  from: 13027474    to: 13031285    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version