Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            --------------->AtSPL8                                    --------------->AGL15                          --------->ARR11(3)                          <---------ARR11(3)           <----------DOF2                     <XXXXXXXXXXXXXXXXXXXXXMIR447C  --------->GLK1(2)                            ----                  <-----------GT1   <---------------AGL15                              --------->ATHB12            <---------TOE2(3)      ----------------->AGL2                  ----------->GT1  <--------       <------ZmHOX2a(1)  <---------GLK1(2)        <---------GLK1(2)<---------REM1(1) <-------TEIL  - ------------>AGL15 --------->ZAT6 ----------------->AGL3  <-----------RAV1(1)<-----------GT1--------   caaataagaggattaagttttaacaatagattttgaccccaattttagtactagattctttttgttgttgttgtagattgttactagattcattgtggat  13015600                                                                                        --------->ANAC46                                                                                        ------->GAMYB                                                                                        --------->DEAR3(1)                                                                                        --------->RAP2.6(2)                                                                                       --------->MYB46(3)                                                                                       --------->DEAR3(2)                                                                                     --------->MYB52(1)                                                                                     ------>MYB46(1)                                                                <---------MYB52(1)   ------>MYB83                                                               <-----------HVH21   --------->AtMYB61  --------->YAB1                 <---------AHL20(2)        ------>MYB83            <---------MYB59 ----->AHL20(2)                 --------->AHL20(2)         --------->MYB52(1)     --------->MYB46(3) -ANAC46              --------->At4g35610                  ------>MYB46(1)      ------>MYB46(1) -------->ARR11(3)    <---------At4g35610                --------->AtMYB61      ------>MYB83 --->GT1         ----------->HVH21                       <---------MYB59      <---------MYB59   aaaatcatgttttttgtatttgacagctaaaccattaatttgtatgccagacaacatgaccaaaccgtctggtctacaaaccgaaccaaaccgccaagtc  13015700                                                ----------->RAV1(1)                                               <---------ALFIN1                                    <----------TaMYB80                                    <---------KAN4(1)                         <---------ATHB12      --------->AtMYB61                       --------->WOX13(1)     --------->MYB46(3)                     <---------ATHB12--------->KAN4(2)            <---------ALFIN1                    ------>MYB83    --------->KAN4(1) --------->ANAC46                    ------>MYB46(1) --------->HSFB2a(1)         <---------ALFIN1                -----               ------>MYB83         <---------HSFB2a(1)        <---------ZAT18                 <-----               ------>MYB46(1)     ---------->TaMYB80 --------->ANAC58                        -------             <---------MYB59       <---------KAN4(2)  --------->ANAC58                        <------             --------->AtMYB61   <------ZmHOX2a(1)--------->AtMYB61                <---------ZAT6   tacaaaatatcaaaaccaaacctatcaatcaaacaggaatattcttccaccaccataggccatagcccacatcccctactaactagtgagaatgtagatc  13015800                               --------->HSFC1(2)                               <---------KAN4(1)                               --------->KAN4(1)                               <----------TaMYB80                               <---------HSFB2a(1)                               <---------HSFC1(2)                               --------->HSFB2a(1)                                      <---------YAB1                              <---------KAN4(2)      <---------ALFIN1       <----------DOF2                         <---------LBD16----------->RAV1(1)                ------>ZmHOX2a(2)                        --------->MYB52(1)   ---------->DOF2              <------ZmHOX2a(2)                       --------->MYB52(1) ----------->RAV1(1)            --------->ARR11(3)                   --------->ANAC58    --------->DEAR3(1)                --------->ARR14(2)                   --------->AtLEC2    --------->AtMYB61                 <---------AGP1 --------->ICU4           <---------ARR11(1) ---------->TaMYB80   <---------ALFIN1      <---------ARR14(2) ---->YAB1<---------CCA1(2)--------->LBD16<---------ALFIN1               <---------ARR11(3)      ---- -ZmHOX2a(2)       --------->ANAC58    <---------ALFIN1        --------->HSFB2a(2) <---------bZIP60(1) -->ARR11(3)      --------->WOX13(1)  --------->MYB46(3)       <---------HSFB2a(2) --------->bZIP60(1) ---ARR11(3)  --------->WOX13(1)--------->KAN4(2) <---------ZAT18       <---------CCA1(2)     <------   ataacaaaacccaaatctatcaagcaaaccggaatattccaccaccacatagcccacatcccctactagaatgtagatctttatgaggtcatgtttgaat  13015900                                                                           <---------ARR14(2)                                                                           --------->ARR14(2)                                                                          <---------GLK1(2)                                                                        --------->LBD16                                                             --------->WOX13(1)                                                           ------------>CBF--------->GLK1(2)                                  <-----------GT1      <---------ATHB12--------->ANAC46             -                             --------->LBD16        --------->TOE1(2) <---------LBD16             <--       <---------GLK1(1)   <---------LBD16          --------->TOE2(2)--------->MYB52(1)           <--  --------->YAB1        --------->GLK1(1)         >>>>>>>>>MYB2    --------->MYB46(3)        *TSS <-- ------->GT1            <---------GLK1(1)   --------->HSFB2a(2)<---------ATHB12          --------->At4g35610 ---AtLEC2          <------ZmHOX2a(1)       <---------HSFB2a(2)------------>CBF          ----------->RAV1(2)   ggtataatgaaatctcatagtaggagaaacccggtttaacacatttgtagaaaaccaaggattcaatcaataaccggaatcttgagatagcacctgtcta  13016000                                                                            <----------DOF2        ------>NtERF2                                                     --------------->AGL15    --------->bZIP60(1)                                                   <---------------AGL15    <---------bZIP60(1)                                                  ============================    --------->ANAC46                                                     <-----------------AG  <---------DOF5.7(2)                                          <---------HSFB2a(2) --------->WRKY38(1)                                <-------TEIL         <-----------------AGL1 ----------->HVH21                                 =========================HOX2a_HOX2a --------->WRKY45                                  <------ZmHOX2a(2)     <-----------------AGL2 --------->WRKY12                                 --------->AGP1 ---------->DOF2                   <- -------->DOF5.7(2)                               --------->ARR11(3)  --------->ARR14(2)           -- -------ANAC46                                    <---------ARR11(3)  <---------ARR14(2)   ---------- -------ANAC58                --------->ATHB12   --------->GLK1(1)    <---------GLK1(2) --------->TOE1(3) -------ANAC58  ----------->GT1                  <---------GLK1(1)   <------ZmHOX2a(1)  --------->TOE2(3)   gcgttgacgacaccaaaattgaaaatttggcatcatttgcgaaacagagagagatccattcaattccaaaaggattctcttttgggaaaaccctaaatcg  13016100                                                                                      ===============                                                                                      ------>ZmHOX2a(2)                                                                                     ================                                                                                     --------->GLK1(1)                                                                                    <---------ARR14(3)                                                                                    <---------ARR11(3)                                                                                    --------->ARR11(3)                                                                                    --------->ARR14(3)                                                                                    --------->GLK1(2)      --------->ARR14(2)                                                            <---------AGP1     ------>MYB83                                                                   --------->ARR14(2)     ------>MYB46(1)                                                                <---------ARR14(2)   --------------->AGL15                                                           <------ZmHOX2a(1)   <---------------AGL15                                                      <-------TEIL  <-----------------AGL3                                                     --------->CCA1(2)  ----------------->AGL3                                                    <---------ARR14(2)  <-----------------AGL1                                                    <---------GLK1(2) ------>MYB46(1)                                                      <---------GLK1(1)--------->HSFB2a(2) ------>MYB83        <---------WOX13(1)                               --------->GLK1(1)<---------HSFB2a(2) ==================MADS_MADS                                        <------ZmHOX2a(1)<------ZmHOX2a(2) --------MYB55(2)  --------->ATHB12                                 ========================HOX2a_HOX2a ------->MYB46(3) <---------YAB1   <-----------RAV1(2)    --------->ANAC46  --------->ARR14(2) >DOF2<---------ARR14(2)         <-----------HVH21---------->DOF2   =========================HOX2a_HOX2a   acccaccaaatttggagactgtgattgagcatgagcgtcagaagttgatgaacaaagtcgacgaaatcgaggatttcagattcgaggatctcgaaatgga  13016200                                 ------>NtERF2                                --------->DEAR3(1)                               --------->ATERF1(1)                              <---------ATERF1(1)                            --------->ATERF1(1)                            <------NtERF2                            --------->RAP2.3(1)                            --------->ORA47(2)                                                 <-----                           <---------ATERF1(1)                                                 <-----                           ------>NtERF2                                                   <---------ZAT2                        <---------TGA2(2)                                                  <---------At4g35610                       ----------->TGA1                                                    --------->At4g35610                  <------ZmHOX2a(1)       <---------ARR11(3)                               --------->ZAT2              ---------->DOF2--------->DEAR3(1)                                            ----------             <------ZmHOX2a(1)------>NtERF2                                               <----------           <---------TOE2(3)--------->DEAR3(2)               --------->ATERF1(1)        <---------At4g35610         --------->CCA1(2) <---------RAP2.3(1)              <---------ATERF1(1)         ----------->RAV1(2) ===================HOX2a_HOX2a--------->SPL7             ---------->ID1                --------->At4g35610 ===================HOX2a_HOX2a<------NtERF2 --------------------->WRI1            --------->REM1(1)-   gacggagaaagataaggaaaggatgatgacgccgacgacgagaatgtcttattcatcttcgtcgtctccgtctccatcttcggcttcatcatctgctgcg  13016300                                                                                              -------      <---------At4g35610                                                                     <------ ----ANAC58                                                 --------->At4g35610       ------>ZmHOX2a(1) ----ANAC58  --------->ANAC58                               <---------At4g35610     ----------->RAV1(2) ->RAV1(2)   --------->ANAC58               <-----------ARR10                    <---------At4g35610 -RAV1(1)------>NtERF2           <---------LBD16         <---------At4g35610  <---------At4g35610 --- ----->ZmHOX2a(1)             --------->At4g35610   <----------DOF2       ------>ZmHOX2a(1) <--------   tcctctctcgctgccaaggcaattcgagcatcttctgcgcatagagactcttctctttcttctgcttactcgtctccttcttctgctcctgttcccactc  13016400                                                            --------->ATHB12                                                           <-------TEIL                                                        --------->ATHB12                                                        -------->HAHB4                                         <----------DOF2<--------ATHB1                                      <---------ANAC46 --------->ICU4                                     <------NtERF2   --------->YAB1 -->ANAC46                         <---------REM1(1) <---------ICU4 ---ALFIN1                         <-----------RAV1(1) <---------YAB1 --->ZmHOX2a(1)   ---------->ID1<-----------RAV1(1) --------->ICU4                           <------- -ALFIN1     <----------DOF2<----------DOF2       --------->YAB1                             --------   ctcccaaggtttcatcttttgttcttctctctttctggtgtcgcttaattgttcataatgattcatgggtttactctgtttttgcttcaattgaaatgtt  13016500  Previous    Next  AGI:  At2g30530.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G01970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21287.1) Range:  from: 13015993    to: 13018140    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version