Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        ---------->DOF2                      --------->O2   <------ZmHOX2a(2)                     ----------->RAV1(1) -----PIF5 <---------ANAC58              <---------------AGL15               --------->ZAT2 ---->PIF5 <---------ANAC46              ============================================================ -->ZAT2   <---------ANAC58         <---------ICU4                           <---------At4g35610 ---ZAT2--------->DAG2              ---------->DOF2                         ------>NtERF2--------->MYB111(1) -->At4g35610                    --------->TOE2(3)          <-----------HVH21<---------ZAT2    <----- ---At4g35610                    --------->YAB1    --------->ZAT18 ---------->DOF2  ---------->DOF2   cgtggatcaaaaggcttgtgctcaaaaaacttcatccataatgccacatgaagtgaacaaaatgtcaccaaaagatgccagcttgtcaaagtagttgctg  12985200                     --------->ATHB12                     <---------ICU4                     -------->HAHB4                     --------->YAB1                    --------->ICU4                    <---------ATHB12                                          --------->ZAT14                 <---------AHL20(2)                                           <---------ZAT14                 --------->AHL20(2)                                           --------->ZAT18                --------->ICU4                                                <---------ZAT18           ----------->GT1                                                  <---------GLK1(1)         ---------->DOF2                                          --------->YAB1    <---------------AGL15                                        --------->ICU4    --------------->AGL15                            --------->YAB1  --------->ATHB12 ===================MADS_MADS                      --------->AtLEC2 <---------YAB1                  - -----DOF2--------->DAG2    --------->ANAC46  --------->GLK1(2)  <---------YAB1          ---------->DOF2   taagttcaatataaagtaataaatgattacacacagatagactatgagattccatgcataaactgttatcatgaatggagttcacccatggtaaagaaga  12985300                                                     --------->ANAC58                         --------->ANAC58            --------->ANAC46       --------->ANAC58                    ---------->DOF2    ------>ZmHOX2a(1)                    --------->ANAC58             --------->WOX13(1)       --------->TOE2(3)        --------->DAG2           <-------TEIL  --------->ANAC58     <---------HSFB2a(2)           --------->ANAC46          --------->GLK1(2)   ---------->DOF2 --------->HSFB2a(2)   <---------YAB1 <---------TOE2(3) <---------ATHB12<-----------GT1   --------->ANAC58     ---------->DOF2 --------->DOF2<---------ATHB12--------->DAG2<---------LBD16  ---------->DOF2   actaaagtagagattcaatcaataaagaagcaaaaagtttccttatttctgggacacacaaacaaaaagtatgattcaaagccactagatacctcgaata  12985400                                            ------>MYB83                                            ------>MYB46(1)                               <------ZmHOX2a(2)                <---------------AGL15    ----------------->AGL1                           ===========                ===========================================MADS_MADS                   <---------YAB1                --------------->AGL15    <-----------------AGL3                     =================               ----------------->AGL2    ----------------->AG                       <------ZmHOX2a(2)   ------>ZmHOX2a(1)                   <-----------GT1                  <-----------------------TaNAC69(2) <---------ANAC46                  <---------ARR11(3)              <---------ICU4  --------->ARR11(3) <---------ANAC58              --------->ANAC55(2)         --------->ZAT18        <---------At4g35610 <---------ANAC58              <---------ANAC55(2)     --------->MYB52(1)     <-----------GT1   gtttcctgtggaatcaaaccagaattagtagacacataatcttaccaaatgtgaaaccaagggtgctaataagggccttgttacagatcacgatcgaaac  12985500                                           --------->ARR14(2)                                     ---                               --------->KAN4(2)                                                  ===                              <---------KAN4(1)                                                 -----         ----------->GT1      --------->HSFB2a(1)              <---------ARR14(2)      <------ZmHOX2a(2)      --------->MYB52(1)      <---------MYB46(3)               --------->ARR14(2)     --------->ARR14(2)  --------->ZAT18           <---------MYB52(1)   <---------HSFB2a(2)                  <---------ARR11(3) <------ZmHOX2a(1)        --------->DEAR3(1)     --------->HSFB2a(2)<---------ANAC58  --------->ARR11(3) =======HOX2a_HOX2a      <------NtERF2--------->ZAT2           <---------ICU4     --------->YAB1<---- =======HOX2a_HOX2a---------->DOF2    <---------ZAT2   <------NtERF2<---------ANAC58  <---------ARR14(2)   agaggacacaacggataaactcaaagcgccgattgttccaagctggaacttctgggcatcgctcatatttgctcgcttcttctatcacgatctacgatga  12985600            <---------ICU4          ------>MYB83          ------>MYB46(1)                            ------------>CBF          ------------>CBF             --------->bZIP60(1)             --------->MYB52(1)         ----------->RAV1(1)           ======================================bZIP_DOF       --------->MYB46(3)              --------->TGA1a             --------->DAG2                 --- --->ZmHOX2a(2)            <------ZmHOX2a(1) ------->MYC3         ---------->DOF2            -------- =================================HOX2a_HOX2a<-------MYC3<---------ATHB12                <------NtERF2 ---->ARR11(3)  <---------At5g28300    <---------bZIP60(1)--------->YAB1                --------->LBD16 -----ARR11(3) --------->YAB1          --------->ANAC46--------->WOX13(1)             <---------LBD16   tctaataaaaccaacaattacagtatggaggaatcaaactcacatcacatgcttagccaatcaaaaccaaaagtaactgtaagagcaacgcggagaagaa  12985700                                                                               <-----------HVH21                                                                              <---------O2                                                                              --------->O2                                                                              --------->bZIP60(2)                                                                              --------->TGA1a                                                                              --------->ANAC58                                                       ----------->RAV1(1)    --------->ANAC46                                                     --------->ZAT18          --------->ANAC58                                                     <---------ZAT18          <---------ANAC55(2)                                                     --------->ZAT14          --------->ANAC55(1)                                             <---------At4g35610              =======================                                             --------->At4g35610       <-----------GT1      --------->TOE2(3)                     --------->GLK1(2)     --------->ARR11(3)   --------->ARR14(2)                   <------ZmHOX2a(1)         <---------ARR11(3)      --------->ANAC58   <---------ARR14(2)                ==============================RAV --------->YAB1     --------->ANAC58 ------->DOF2     ---------->DOF2    <-----------RAV1(2)------------>CBF    <---------ALFIN1--------- --->GT1      --------->ANAC46   ---------->DOF2     <---------ZAT14--------->YAB1        --------->ANAC46   aaaaggaacctcatttacgaaaatgcgagagaattcaaagcaggagaagctgaactgcaccaatggaagataataacaacacgtcaaattacaagcagaa  12985800                                  <-----------GT1                                <---------ATHB12                           --------->ANAC58                           --------->ANAC58                                        <------ZmHOX2a(1)                        ===========================HOX2a_HOX2a                    --------->LBD16                        ==========================HOX2a_HOX2a                  <-------TEIL                    --------->GLK1(2)                 ----------->GT1         -----------------------                  --------->HSFC1(2)       <------ZmHOX2a(2)                  --------->GLK1(2)         ---------->DOF2------>ZmHOX2a(1) <---------ARR11(3)                  --------->CCA1(2)      <---------ZAT6--------->ARR14(2)    --------->AGP1                     <---------ARR14(2)    ----------->GT1 <---------ARR14(2)    <---------AGP1                    --------->GLK1(1) --------->YAB1   --------->HSFB2a(1)     --------->ARR11(3)             ------->GAMYB ===================bZIP_DOF------------>CBF------>ZmHOX2a(2)         --------->MYB52(1)  ---------->DOF2 >YAB1----------->GT1 ----------->RAV1(2)<---------CCA1(2)       ----------->GT1<-----------RAV1(2)   caaggatagtgtaaagtcgaagaatcctgaagcaataaaccctagatctatcgatgaagataaaaaatagtttaacggagattcaggagaagaaaaggag  12985900                                                          ----------->GT1                                                       --------->ARR14(2)                                                       --------->GLK1(2)                         --------->GLK1(2)             <---------ARR14(2)              <---------ARR11(3)              <------ZmHOX2a(1) ->ANAC81     --------->ARR11(3)   <---------ARR11(3) <---------GLK1(2) >>>>>>>>>TBF1 ----------->GT1   agaaaatggagagagagaccttgagagaatcagacaagttctaatggaggagaagagaatctgtgaatttggaagaagaagcctatttttgtaaattcca  12986000                                              --------->MYB52(1)                                              <-----------GT1                                           --------->YAB1                                          <---------YAB1                      <---------ANAC58   --------->AHL20(2)                      <---------ANAC58 <---------YAB1                                            <---            --------->TOE2(3)          <---------TOE2(3)                                      <------           --------->ANAC58          <---------AHL20(2)                                       -------           --------->ANAC46          --------->AHL20(2)                                       -------           --------->ANAC58      <---------AHL20(2)                                         <--------          --------->SPL7   ------>ZmHOX2a(1)<---------AHL20(2)                      <---------AHL20(2)    <-----------GT1  --------->MYB59--------->ICU4                               ------->TEIL<-------   <-------TEIL --------->ICU4 --------->ANAC55(2)        ----------->GT1    ------->TEIL   =========   agagattcaccatacgtcaaaattgggtcctatatgtaattaatattataacggggctaaatgtaaatttgaaaacatggatgtatttcatttctcaggt  12986100  Previous    Next  AGI:  At2g30460.1    Description:  similar to transporter-related [Arabidopsis thaliana] (TAIR:AT1G06890.2); similar to transporter-related [Arabidopsis thaliana] (TAIR:AT1G06890.1); similar to hypothetical protein OsI_017924 [Oryza sativa (indica cultivar-group)] (GB:EAY96691.1); contains InterPro domain Protein of unknown function DUF250 (InterPro:IPR004853) Range:  from: 12983526    to: 12985566    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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