Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <---------AtMYB61                                                        <---------DEAR3(1)                                                        --------->ALFIN1                                                      <---------MYB46(3)                                                     <---------DEAR3(1)                                                     --------->ALFIN1     <---------ALFIN1                                                     <---------AtMYB61   <---------MYB55(2)                                                  <---------AtMYB61     --------->ANAC58             --------->MYB46(3)          --------->ARR11(3)             --------->ANAC58           --------->WOX13(1)           <---------CCA1(2)    <------MYB46(1) --------->MYB46(3)     <----------DOF2                   <---------ARR11(3)    <------MYB83--------->MYB46(3)  <---------ARR11(1)    --------->TOE2(3)<---------ARR11(3) <---------MYB46(3)     <---------YAB1 <---------MYB52(1)  <---------GLK1(2) --------->AHL20(1)  <---------ANAC46 <---------ALFIN1 ------At5g28300--------->AtLEC2       --------->ARR11(3)--------->MYB55(2)------>MYB46(1) ----->HVH21 <---------ATHB12          <---------AHL20(1)<---------MYB46(3)------>MYB83   accgtttctttgtcaaccattcaaattcttaaccagagaaatatatcttcttgaggtggtggtgggtttgtctcacccactcaccatcatcgaccatttt  12982700                                                            --------->YAB1                                                           <---------ATHB12                                                   <---------MYB52(1)                                                  <-------GAMYB             <----------DOF2                     <---------ANAC58             <---------DAG2                      <---------ANAC58<---------At4g35610       --------->ZAT14      --------->ALFIN1    <---------At4g35610    --------->ANAC55(2)                 --------->ZAT6    <---------ANAC58      --------->At4g35610    <---------ANAC55(2)         <-----------GT1      ---    <---------ANAC58      <---------GLK1(1) --------->HSFB2a(1)  --------->At4g35610 <---------ALFIN1   gtattggagtggctacttttacaaatggagatgcctagcgaatcaaatgttccgttatgcaatcgtgagcttctcattttaactcgaacactctccacta  12982800                                                                     ---------->DOF2                                                               --------->WOX13(1)                                                             <---------YAB1                       ---           <---------AtLEC2                       ----------->GT1 --------->YAB1                  --- ------>ZAT6------->TEIL             <---------YAB1       <---------YAB1                          <--   aaactagtccaatgcatgttaagttagtagaccgtggtttttatagccgagatgcttaatatgattaatcaaaaagaagaaagtttttaggcagacaaaa  12982900                                                                                          --------->AtMYB61                                                                                         --------->MYB46(3)                                                                                         <---------MYB55(2)                                                                                         <---------ATHB12                                                                                        ------>MYB46(1)                                                         <---------At4g35610            ------>MYB83            ----------->HVH21                       <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           <---------WOX13(1)                      <-------TEIL                         --------->ANAC58        --------->AHL20(1)                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)     ------>MYB46(1)        <---------AHL20(2)         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                ------>MYB83        --------->AHL20(2)         <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           <---------MYB59       --------->AHL20(2)          <xxxxxxxxxxxxxxxxxxsmallRNA(fl3)                  --------->MYB46(3)    --------->AHL20(2)             <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)          --------->ANAC58    <---------AHL20(2)       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                   --------->ANAC58< ------>TOE2(3)           ---------->DOF2  --------->ALFIN1          <---------At4g35610--------->ANAC58 ------>TOE1(3)    <------ZmHOX2a(1)       <---------REM1(1)         --------->At4g35610-------->P  < --------DOF2     ----------->GT1 --------->At4g35610    --------->At4g35610       ------->TEIL   <xx   ctttaaaaaattaattgacgaggaaaaaaaaagaagagctcagaggtgtggcatacatcaactgatagttcagaagaatgcaatggacccaaccaatgct  12983000                                                                                <xxxxxxxxxxxxxxxsmallRNA(si3)                                                                                <xxxxxxxxxxxxxxxsmallRNA(le3)                                                                               <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                               <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                               <xxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                               <xxxxxxxxxxxxxxxxsmallRNA(le3)                                                                              <xxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                             <xxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                            <xxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                            <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                            <xxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                                            <xxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                            <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                            <xxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                           <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                           --------->ZAT6                                                                          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                                          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                        <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                        <xxxxxxxxxxxxxxxxsmallRNA(le3)                                                                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                        <xxxxxxxxxxxxxxxxsmallRNA(si3)                                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                       <xxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                       <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                                       <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                       <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                       <xxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                     <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                     <xxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                     <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                     <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                     <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                    <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                    <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                    <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                    <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                    <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                    <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                    <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                                    <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                    <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                    <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                    <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                   <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                   <xxxxxxxxxxxxxxxsmallRNA(fl3)                                                                   <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                   <xxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                   <xxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                                   <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                   <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                   <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                   <xxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                   <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                  <xxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                  <xxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                  <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                  <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                  <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                  <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                  <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                  <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                  <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                  <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                  <xxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                  <xxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                                  <xxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                  <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                  <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                  <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                  <xxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                  <xxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                  <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                 <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                 <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                          <xxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                        <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                        <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                        <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                      <xxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                      <xxxxxxxxxxxxxxxxxsmallRNA(se3)                                                      <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                      <xxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                      <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                      <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                      <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                      <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                      <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                      <---------ANAC58 <xxxxxxxxxxxxxxxxxsmallRNA(se3)                                                      <xxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                      <---------ANAC58 <xxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                      <xxxxxxxxxxxxxxxxxsmallRNA(si3)                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                     <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                     <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                     <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                    <xxxxxxxxxxxxxxxxsmallRNA(le3)                                                    ------->TEIL <xxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                    <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                    <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                    <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                   <xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxxxxxxxxxxxxsmallRNA(si3)                                                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                   <xxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                  <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                  <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                  <xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxxxxxxxxxxxxxsmallRNA(se3)                                                  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                  <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                  <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                  <---------ZAT14<xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                 <xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                 <---------DEAR3(2)<xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                 <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                <xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                               <xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                               <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <-----------RAV1(1)                                              <---------ARR14(2) <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                          <---------LBD16 <xxxxxxxxxxxxxxxxxxsmallRNA(se3)                                          <xxxxxxxxxxxxxxxxsmallRNA(i)<xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<xxxxxxxxxxxxxxxxxxsmallRNA(le3)                                          <xxxxxxxxxxxxxxxxsmallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                         <xxxxxxxxxxxxxxxxsmallRNA(i)<xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                         xxxxxxxxxxxxxxxx>smallRNA(s)<xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                         <xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                 <xxxxxxxxxxxxxxxxsmallRNA(i)    <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                 <xxxxxxxxxxxxxxxxsmallRNA(s)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                <------NtERF2 --------->ARR14(2) <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                <xxxxxxxxxxxxxxxxsmallRNA(s)     <xxxxxxxxxxxxxxxxxxsmallRNA(si3)                               <xxxxxxxxxxxxxxxxsmallRNA(s) xxxxxxxxxxxxxxxx>smallRNA(i)                               --------->LBD16<xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                              <---------LBD16 <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)<xxxxxxxxxxxxxxxxsmallRNA(se3)                             <---------LBD16  <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<xxxxxxxxxxxxxxxsmallRNA(fl3)                             <xxxxxxxxxxxxxxxxsmallRNA(i)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                             <xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxxxxxxxxxxxxxxsmallRNA(si3)                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)<xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                            <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)<xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                            --------->ZAT2<xxxxxxxxxxxxxxxxxsmallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                            <xxxxxxxxxxxxxxxxsmallRNA(i)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                            <xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                            <---------ZAT2xxxxxxxxxxxxxxxx>smallRNA(s)<xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                            ------>MYB46(1)  <xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                            ------>MYB83 <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)  <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                           --------->MYB55(1)<xxxxxxxxxxxxxxxxxsmallRNA(fl3)<xxxxxxxxxxxxxxxxxsmallRNA(se3)                           <xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                           <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)<xxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                          <xxxxxxxxxxxxxxxxsmallRNA(s)<---------ANAC46<xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                          <xxxxxxxxxxxxxxxxsmallRNA(i)<xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                          <---------MYB55(2)<xxxxxxxxxxxxxxxxxxsmallRNA(si3)<xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2) <---------ZAT18<xxxxxxxxxxxxxxxxxsmallRNA(le3)                          <-----------RAV1(2)<xxxxxxxxxxxxxxxxxsmallRNA(si3)<xxxxxxxxxxxxxxxxxxsmallRNA(se3)                          <---------ALFIN1<xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                          --------->MYB46(3)--------->LBD16 <xxxxxxxxxxxxxxxxsmallRNA(si3)  <--------                          <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)<xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)<------NtERF2<xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                         <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                         <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)<xxxxxxxxxxxxxxxxxxsmallRNA(se3)   <---                         <---------At4g35610<xxxxxxxxxxxxxxxxxsmallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           --------->YAB1<xxxxxxxxxxxxxxxxsmallRNA(i)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   <--------           <---------ICU4<xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) *TSS          <---------YAB1 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)<-----------RAV1(2)<xxxxxxxxxxxxxxxxxsmallRNA(fl3)        --------->YAB1   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)--------------->AtSPL8--------->AtMYB61       <xxxxxxxxxxxxxxxxsmallRNA(fl3)    <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)      <---------ARR11(3)------->TEIL<xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<xxxxxxxxxxxxxxxxxxsmallRNA(se3)     <---------CCA1(2)<---------ZAT18    xxxxxxxxxxxxxxxx>smallRNA(se3)<xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   <xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   gaagcctatatcatcatagctcaatgcaccagccgggaatcgaacccgggtctgtaccgtggcagggtactattctaccactagaccactggtgcttttt  12983100                                --------->YAB1                               <---------YAB1                             <---------CCA1(1)                      <---------YAB1                     --------->AHL20(2)                     <---------AHL20(2)                   --------->AHL20(2)                <---------AHL20(2)                --------->ARR11(3)                --------->AHL20(1)                <---------ARR11(3)                --------->AHL20(2)                                             ------>MYB83                <---------AHL20(1)          <---------ANAC55(2)        <---------------AtSPL8 --------->AHL20(2)<---------AHL20(2)       ----------->GT1            --------------->AtSPL8  ------ --DOF2--------->ANAC58     --------->ARR11(3)             --------->GLK1(2)   ------>MYB46(1)------- ------YAB1    --------->AHL20(2)  ---------->DOF2      ------------>CBF     <---------MYB111(1)   <- -DAG2 --------->ANAC58     <---------ARR11(3)       ----------->RAV1(1)  <-----------GT1----------->GT1   tgattaaacacgactaaatatattaatatagatattataaagtatcatgtaaaaacaacacaatcttttgtagtttgtaccaactacgaagtagtaaaaa  12983200                                                                                                  ---                                                                                                 ----                                                                                           <---------TOE1(2)                                                                                           --------->ARR14(2)                                        --------->DAG2                                  <---------ANAC58                   <---------ANAC46    ---------->DOF2                                  <---------ANAC58    <---------HSFB2a(2)        <---------TOE1(2)                               <---------DAG2    ---- --->DAG2     <-----------RAV1(1)     <---------AHL20(2)      ---------->DOF2  <----------DOF2<------ --->DOF2     <---------ICU4   <---------TOE2(2)       --------->AtLEC2     <-----------GT1<---------ARR14(2) --------ICU4--------->ICU4    <---------TOE2(3)  <-----------GT1  ----------->GT1      <---------ANAC46   gtcattacagaagtaattgttgctcatatttcttaggtatataaagtagaataaaccatgctacaaaagtagtaaaattcacttttgttttcgtattttc  12983300                                                    ----------->GT1                                            ----------------->AGL3                                            <-----------------AGL2                                            <-----------------AG                                            ----------------->AG                                            ----------------->AGL1                                            ----------------->AGL2                                          --------->ANAC58                                     ------           --------->ANAC46               --------->ANAC58                        --------->DAG2           --------->ANAC58               <----------ID1                         ---------->DOF2   --------->YAB1           --------->CCA1(2)<---------------AGL15        =========================== --->ZmHOX2a(1)         --------->HSFB2a(2) <-----------------AGL3        =========================== ----->TOE1(3)          <---------HSFB2a(2) ========================================================= ----->TOE2(3)---------->DOF2           ---------->DOF2       ------->TEIL<------ZmHOX2a(2) ------>ZmHOX2a(1) -----GT1  --------->ANAC58--------->ARR14(2)--------------->AGL15        =========================HOX2a_HOX2a   cttaatcgtagccacgaaaaggccttctggatacaaacctataaaagccaaaattggtaatatgtatatgaaatggatcaacaaaaagctgttcctcctc  12983400                                    --------->GLK1(2)                                   <---------GLK1(2)                                   --------->ARR14(2)                                 ----------->ARR10                            --------->At4g35610                     --------->ANAC58         <---------ALFIN1   <---------At4g35610                     --------->ANAC58   ------>ZmHOX2a(1)---------->DOF2<---------ARR14(2)   ---------->DOF2          <---------GLK1(1) >ZmHOX2a(1)    --------------->AGL15               --------->GLK1(1)      --------->TOE2(2)        - =========HOX2a_HOX2a      --------->GLK1(2)       <---------ARR11(3)      --------->TOE1(2)        < =HOX2a_HOX2a   <----------DOF2 <---------------------WRI1        --------->MYB52(1)          ------- ===============================MADS_MADS          --------->ARR11(3)   --------->GLK1(1)    --------   taatcctctccccccttcctttgaaagggaagctgtagattctctctaagagagatatcaaagttgacaaacggaaacctatgaaatctgatactacaac  12983500                                                                        --------->ANAC58                    <-----------ARR10                                   --------->ANAC46                    --------->AGP1                                      --------->ANAC58                   <---------ZAT2                                    <---------ZAT18                   --------->ZAT2                                <----------DOF2                   <---------At4g35610                        ------>ZmHOX2a(1)             <---------ZAT2                                 ------>ZmHOX2a(2)             <---------At4g35610                           <------ZmHOX2a(2)       --------->GLK1(1)                                  <---------ARR14(3)      --------->ARR11(3)                                  --------->ARR11(3)      <---------ARR14(2)          --------->GLK1(2)       --------->ARR14(3)                  <------ -------->GLK1(1)  --------->At4g35610                    <---------ARR11(3)                  ------- ---------GLK1(1)<---------ALFIN1 <-----------ARR10       <---------ARR14(2)              --------->ARR14(2) ---->RAV1(1)--------->At4g35610  <---------ARR11(3)      --------->ARR14(2)             --------->WOX13(1) ->REM1(1)   --------->ZAT2       --------->ARR11(3)     <------ZmHOX2a(1)           --------->GLK1(1)   agatttcagatatcgagctccagctctacgcttgaaaatctttgtttgaattccatacaggatcctgcttttgcactccattgtctgatatcaatccgct  12983600  Previous    Next  AGI:  At2g30450.1    Description:  pre-tRNA. tRNA-Gly (anticodon: GCC) Range:  from: 12983025    to: 12983095    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g30460.1    Description:  similar to transporter-related [Arabidopsis thaliana] (TAIR:AT1G06890.2); similar to transporter-related [Arabidopsis thaliana] (TAIR:AT1G06890.1); similar to hypothetical protein OsI_017924 [Oryza sativa (indica cultivar-group)] (GB:EAY96691.1); contains InterPro domain Protein of unknown function DUF250 (InterPro:IPR004853) Range:  from: 12983526    to: 12985566    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version