Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       <---------ARR11(3)                                     --------->ARR11(3)                             --------->ICU4                             <---------YAB1                           <---------ICU4                                      <------MYB46(1)                           --------->YAB1                          <---------ANAC55(2)                           <--------HAHB4            <---------ARR11(3)        <------MYB83                          --------->ICU4             --------->ARR11(3) --------->TOE1(3) ------>TOE2(3)           <---------ATHB12          <---------CCA1(2)   --------->TOE2(3) -----HAHB4             --------->WOX13(1) <---------TOE2(3)       --------->ANAC55(2)    --------->LBD16 ----->YAB1          --------->GLK1(2)--------->CCA1(2)    <----------DOF2 --------->MYB52(2) -----YAB1      ---------->DOF2  --------->YAB1     <---------GLK1(1) ------->TEIL        <----------   cattaacatgacaaaccaaaaagaatccatcattatcaagatatataggttttgatatcttcttttgttaagtaccttagttggtcttcttccccaatct  12979600                                                                                       --------->ANAC46                                                                                       --------->LBD16                                                                                      <---------LBD16                                                                                     <---------LBD16                                                                             ----------->GT1                               <----------DOF2                             ---------->DOF2 -----AGL15     ---------->ID1 <---------DAG2                <----------DOF2--------->DAG2         --   agtttctggttattgtttgtttttttttgtatactttttatgttcaagttatataagaaaaccctttcacaaaaaaaaaaagtatattcagggaaccaga  12979700                                                                                                -----                                                                                              -------                                                                                              -------               <---------AHL20(2)                                                          --------->WRKY18(1)              <---------AHL20(2)                   ---------->DOF2                      --------->SPL7              --------->AHL20(2)            ------>ZmHOX2a(1)                          <---------MYB52(1)          <---------AHL20(2)               --------->TOE2(3)                         <---------ANAC58         <---------MYB52(1)              <---------YAB1  ----------->GT1             <---------ANAC58 ------->ICU4 <---------AHL20(1)        <-----------GT1---------->DOF2          <---------MYB46(3)   aatgtttatcagttaatttttttgtaaaacaatgacatgttttatccttacttaaaagaaagtaatattaaacaaaatatagtggtttcgttcgtcaagc  12979800                                             --------->LBD16                                            --------->RAP2.6(2)                                           <---------LBD16                                          --------->ZAT2                                          --------->At4g35610                       ----------->HVH21--------->MYB46(3)                      <---------WRKY12                   ------>ZmHOX2a(2)   --------->ZAT2                         <-----------HVH21                 <---------ARR11(3)    <---------ZAT2                         <--------ZAP1                 --------->ARR11(3)    <---------At4g35610              <----------DOF2          <---               --------->ICU4          --------->At4g35610              <---------DAG2           ---- ---->YAB1     <---------YAB1        <-----------RAV1(2)      ------>ZmHOX2a(1) <---------WRKY38(1) -->ANAC58--------->ANAC58     ---------->DOF2 <---------ARR14(2)     ----------------->AGL1<-------- -->ANAC58--------->ANAC58     <---------ATHB12--------->ARR14(2) <<<<<<<<<TBF1--------->WRKY18(1)   ataacaaatgaaacgacatgatcgtgtgacccaataagcccagcagccggatttgacttatctccttcttcttccttttcggtcaaatgtttgactttct  12979900                                                        --------->YAB1                            <--                                                       --------->MYB46(3)           <-----------GT1                                                       <---------ATHB12           <---------HSFB2a(1)                                                      ------>MYB83                --------->HSFB2a(1)                                                      ------>MYB46(1)             --------->HSFC1(2)                                  ---------->DOF2     *TSS                        <---------HSFC1(2)-   --------->YAB1          ----------->GT1           --------->WOX13(1)  --------->ANAC46       ----- ------At4g35610         <------------CBF          ------------>CBF      --------->ANAC58      <----- ----->At4g35610       <---------YAB1      <-----------GT1               --------->ANAC58    <------- --DOF2          ------->TEIL----------->GT1     --------->REM1(1)    <---------REM1(2) <----------DOF2   gctaaaaataacaaaaatgaattttaaaattgagaaaaaagagtttcaccttcaccaatcaccatttctctctactcgccaagaagtttcctttcctttg  12980000                          ------>ZmHOX2a(2)       <----------DOF2                         <------ZmHOX2a(2)       ------>ZmHOX2a(2)                        <---------ARR14(3)      <------ZmHOX2a(2)                        <---------ARR14(2)     --------->ARR11(3)                        <---------ARR11(3)     <---------ARR14(2)                        --------->ARR11(3)     --------->AGP1                        <-----------ARR10      <---------AGP1---------->DOF2                   ------      <---------MYB52(2)--------->AGP1         --------->ARR14(2)            <---------LBD16   <----- -------WOX13(1)        --------->ARR14(3)     <-----------ARR10             <---------At5g28300 -------->ZAT18         --------->ARR14(2)     --------->ARR14(3)         <-----------HVH21    ------ ---->ATHB12           --------->RVE1(1)       <---------ARR14(3)        <----------DOF2<---------ANAC58 ----YAB1           ---------->DOF2           <---------CCA1(2)         <---------DAG2  <---------ANAC58 ---DOF2   --------->TOE2(3)    <----------DOF2<---------ARR11(3)    <---------ALFIN1 <-----------GT1   attgcacaactaatctcaaactaaaagatcttctctttaggcatacccagatctttctctctctaaagtctccacctttcacggttttttgcttctcacc  12980100                                              <---------O2                                              --------->O2                                              <---------TGA1a                                         --------->WRKY12                                         --------->WRKY38(1)                                         ----------->HVH21                                        ================MYC_MYB                                        <--------P                             --------->GLK1(2)                                       =================MYC_MYB               <---------ARR14(2)                  <------NtERF2        <-------GAMYB                          <---------GLK1(2)        --------->WOX13(1)            --------->LBD16                         --------->ARR14(2)      <---------ATHB12              <---------LBD16                         <---------TOE1(2)    --------->WOX13(1)     <-----------GT1    ==============================bZIP_DOF  <-----------GT1 ----->RAV1(2)   --------->LBD16------>MYB46(1)<-----------HVH21            <---------TOE2(2) ----At4g35610  --------->DEAR3(1) ------>ZmHOX2a(1)                        ----------->ARR10<------- --->At4g35610 <---------LBD16  ------>MYB83  --------->TGA1a    <----------DOF2  <---------YAB1    -   tgaatccaatcaatctcgccggagtgaattcaccttcctccggttgactcgtcggacttagtccgacctttcaattcgtagattctgtttacaattcact  12980200                                                             <----------DOF2                                                             <---------DAG2                                                            <---------ANAC58                                                            <---------ANAC58                     <---------ANAC55(1)                 ---------->ID1                     <---------ANAC55(2)               <-----------RAV1(1)                     --------->ANAC55(2)               --------->MYB52(2)             <---------ANAC58                     <---------ANAC58                  <---------MYB46(3)             <---------ANAC58                     <---------ANAC46               ------------>MYB.PH3(2)    <---------At5g28300     --------->ATHB12<---------ANAC58        <---------At4g35610               <-----------GT1  ----- ----GT1        ----------->GT1              --------->At4g35610 --------->ANAC46  <---------MYB52(1) ----->ZmHOX2a(2)   --------->MYB52(2)   <----------DOF2<-------GAMYB         <-----------GT1   <----   gatcgtttgattagaaatgggttacttgttcttctaagtctctctttagctgaaagtttgttgctttacgactcttcgatttacccttacttgttcaagt  12980300                                                                                   <------MYB46(1)                                                                                   <------MYB83                                                                               --------->ALFIN1                                                                        ----------->HVH21                                                                        <------NtERF2  <---------LBD16                                                                       --------->HSFB2a(2)                                                               --------->GLK1(2)  <---------AtMYB61                                                              --------->ARR14(2) <--------P ---------                                                           --------->ANAC58   --------->LBD16<-------GAMYB                                                          <---------LBD16    --------->ANAC55(2)                                                         <---------ANAC58    <---------ANAC55(2)                                                         <---------ANAC58 --------->PCF2  <---------MYB52(1)                            <---------ICU4               <---------ANAC46 --------->ARR14(2)<--------             <---------TOE1(2)                <---------ALFIN1<---------GLK1(2)<-----------RAV1(1)         <-------TEIL    --------->YAB1    --------->ANAC46--------->ANAC58<-----------------AGL1 ---->ARR11(3)  <---------ICU4      XXXXXXXXXXXXXXXXXXXXX>MIR472    <-----------HVH21--------->PCF5 -----ARR11(3) --------->ICU4     <----------DOF2   <-----------RAV1(1)<---------DEAR3(2)--------->LBD16   tcttcatcaaattcgtagttatggcgataagaatcactttcacttactccacccatgttgctcggaatctcgtcgggacccgtgttggtcccggtggtta  12980400                                                             --------->ANAC46                                                            --------->LBD16                                                            ------>ZmHOX2a(1)                                                            <---------LBD16                                                       --------->GLK1(1)                                                       <------ZmHOX2a(2)                                                       <---------GLK1(1)                                                      <---------ARR14(2)                                                      --------->ARR14(2)                      <---------TOE1(2)               <---------ARR11(3)               <-------TEIL                           --------->ARR11(3)        --------->ATHB12<---------GLK1(2)       <---------YAB1    --------->DEAR3(2) <----------DOF2     ------>ZmHOX2a(1)  <---------ANAC58    --------->HSFB2a(2) >MYB55(2)  <---------MYB46(3)          <---------ANAC58------>ZmHOX2a(2) -MYB46(3) <---------TOE1(2)            --------->YAB1<---------AGP1   ctgctttgaatccttggttcgtcctagattcttctcccacaagcgtgatttcgatagatctcctcggaatcgacctgcatcgatgtatggtagcatcgcg  12980500  Previous    Next  AGI:  At2g30440.1    Description:  chloroplast thylakoidal processing peptidase. Identical to Thylakoidal processing peptidase 1, chloroplast precursor (TPP1) [Arabidopsis Thaliana] (GB:O04348;GB:Q7DM64); similar to signal peptidase, putative [Arabidopsis thaliana] (TAIR:AT1G06870.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61274.1); contains InterPro domain Peptidase S26A, signal peptidase I; (InterPro:IPR000223); contains InterPro domain Peptidase S24, S26A, S26B and S26C (InterPro:IPR015927); contains InterPro domain Peptidase S26A; (InterPro:IPR014037); contains InterPro domain Peptidase S24, S26A and S26B, C-terminal (InterPro:IPR011056) Range:  from: 12979954    to: 12982574    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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