Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                             ------>MYB83                                                                                             ------>MYB46(1)                                                                                           --------->AtMYB61                                                                                           <---------ALFIN1                                                                                           ------->GAMYB                                                                                          --------->MYB46(3)                                                                                         ------>MYB83                                                                                         ------>MYB46(1)                                                                                       <---------MYB55(2)                                                                                       <---------MYB46(2)                                                                                       --------->AtMYB61                                                                                       --------->DEAR3(1)                                                                                       <---------MYB111(2)                                                                                       <---------MYB111(1)                                                                                       --------->MYB46(3)                                                                         --------->STY1(2)<---------MYB111(2)            <----------DOF2                                              <---------STY1(2)<---------MYB55(2)            <---------DAG2                                           --------->At4g35610 -------->P     <------ZmHOX2a(1)                                               <---------At4g35610--------->MYB55(1)    ----------->GT1                                      --------->TOE2(3)          --------->ANAC46   <---------TOE2(3)                                     --------->TOE1(3)          --------->ANAC58 ------->At4g35610       --------->ANAC55(2)           -------->P    --------->ZAT2 <---------ALFIN1 --------At4g35610       --------->ANAC58     <---------ARR11(3)  <-------TEIL <-----------GT1 ------ ------->ZAT2            <---------ANAC55(2)  --------->ARR11(3)  --------->SPL7    --------->ANAC58 --------ZAT2            --------->ANAC58    <---------GLK1(1)--------------->AtSPL3--------->REM1(1)   tagctgaggaaaaactttttgagactcacgtactgtctgagttttggagttcttggcaacctcaaacgtacagctagctatttgccacaccaaccaccca  12974900                                                  <---------ANAC55(2)                                       --------->ARR11(3)                                       <---------ARR11(3)                                   ---------->DOF2--------->ANAC55(2)          <---------SPL7                                <---------ANAC55(2) ----------->HVH21         <---------ANAC58                                <---------ANAC46  --------->ANAC46            <---------ANAC46                            <---------ARR14(3)   <---------LBD16              <---------ANAC58                            <---------ARR11(3)<----------DOF2           <----------DOF2      ---------->DOF2       --------->ARR11(3)<---------WOX13(1)   <---------ARR11(3)             --- ---->LBD16          <---------AtLEC2--------->ICU4--------->LBD16 --------->ARR11(3)         <------ --->HSFB2a(2)      <-------TEIL----------->GT1 <-----------GT1   --------->RVE1(1)         <--------   gaaacaatgaaagaaccgaaggtgcatgaaggtctcgtaaagatgttgatttacgggacaagttgagaatatctctttcggcgtatggttactgccactc  12975000          <---------At4g35610          <------NtERF2                 <---------WRKY12         ------>NtERF2                  <---------WRKY38(1)                    <---------YAB1        --------->ATERF1(2)    --------->GLK1(2)                    <------------CBF --->NtERF2                   <---------ARR14(2)                  --------->AHL20(2) ---ALFIN1<---------ZAT2      --------->ARR14(2)           ----------->GT1 <---------GLK1(1) -ALFIN1<---------ATERF1(2)   <---------GLK1(2)      <------NtERF2<---------AHL20(2)           ------   tgccagtctgccagcagttaatgtccctctccgattctctggccaacgttgagtcgccagagagtgattttattgagagttctgaatatttagagaataa  12975100                                                                --------->LBD16                                                          <----------DOF2                                                     <---------MYB52(2) <---------ANAC58                                                  <---------ZAT18       <---------ANAC46                    ------------>CBF        <---------AHL20(2) --------->ANAC46                     -                --------->ANAC46          <-----------TBP <---------DAG2<---------ANAC58         <---             --------->ARR14(2)  --------->ICU4   --------->ZAT18     <---------AHL20(2)<---------YAB1 --->YAB1    <---------ARR14(2)--------->YAB1---------->DOF2  <---------LBD16        <---------YAB1 <   tacaactaaatgtcgaatacggcccaatttcagtcatgttttatatttaaagcccactaacttttccgcaaattacttggacctattactattagtacta  12975200           <---------ARR11(3)           --------->AHL20(1)           <---------AHL20(1)      ------------>CBF  --------->KAN4(2) <---------KAN4(1) --------->KAN4(1)                                                                               ---- <---------HSFC1(2)                                                                             ----- <---------HSFB2a(1)                                                                  --------->At4g35610 --------->HSFC1(2)                         --------->MYB59                           <---------At4g35610 --------->HSFB2a(1)                ----------->GT1                              ----------->HVH21 -- ------>TEIL                        <---------ANAC58                    --------->ANAC58      <------ZmHOX2a(2) ------YAB1--------->ARR11(3)       <---------ANAC46                    --------->ANAC46     <------- ---------KAN4(2)---------->ID1     <---------ANAC58 ------->TEIL       --------->ANAC58     --------   cgaatgttcccaatattttggctctatagaaaatggtggagtgattttggtaatgcatcttctcaacatactgaacgacacatttgacagcatccgatcc  12975300         <---------YAB1       --------->YAB1      --------->MYB46(3)                                                                     --------    --------->ARR14(2)                                                                  <------NtERF2    <---------ARR14(2)                                                                  ----------->HVH21  ------->GAMYB                                                                 <---------WRKY12 --------->ANAC58                              ------>ZmHOX2a(2)                <---------WRKY38(1) --------->ANAC46                            <---------ARR11(3)                --------->WRKY18(1) --------->ANAC58                            <---------AGP1                   <-----------HVH21   --- -->ZmHOX2a(1)                           <---------ANAC58                 ------->MYC3 <-----------HVH21 ---->TOE2(3)                            <---------ANAC58                 <-------MYC3<---------bZIP60(1) ------->MYB52(1)                   --------->O2                    <---------ARR14(2)--------->bZIP60(1) --ARR14(2)                         --------->ANAC46                --------->ARR14(2)<---------ANAC58 ->ARR14(2)                         <---------O2                    --------->GLK1(2) <---------ANAC58   tcaacggaaccatcatcgataattctctgtcttattccacgaggcttgatctgtgctactgatggaagagaatccacatgggtcaagggcgtcacaagta  12975400                                                                        <-----------------AGL3                         <-------TEIL                                   <-----------------AG                         --------------->AtSPL8                         ------>ZmHOX2a(2)                         --------------->AtSPL3                         <-----------------AGL2             --------->ATHB12                             --------->ANAC58  --------->ZAT14   ----------->RAV1(1)--------->ANAC58   --------->ANAC58 ->ANAC46------>ZmHOX2a(1)             --------->ANAC58   --------->ANAC46                    <------ ------>ZAT6<---------YAB1   <---------TOE1(2)          ---------->DOF2<------ZmHOX2a(2)      <------   gcactacggtccttctcattggccacattcgtacatttttcaaggaaaaacttcacattcaagccaaattccgatctcattttggatagaacccttgcat  12975500                                                                                                  ---                                                                                                 <---                                                                                               ------                                                                                       <-----------ARR10                                                                                       <---------ARR11(1)                                                                                       <---------ARR14(2)                                                                                       --------->ARR14(2)                                                                       --------->YAB1  ------->TEIL                                                                      --------->ICU4  <---------ARR14(1)                                                                    --------->YAB1    <---------CCA1(2)                                                                   <---------YAB1   <---------ANAC55(2)     <-------TEIL                                                ----------->GT1    --------->TOE1(1) ---ANAC58               --------->TOE2(3)            <----------DOF2 <---------YAB1--------->ANAC55(2) ---ANAC58     <-----------GT1         --------->AHL20(2)   --------->AtLEC2------->TEIL     <-------   accacggttcatgtttttgacattctaccttcatattcccattaactagttgaattcttttcatgcattgttataatgaacttatctcgtatctaatcaa  12975600                                                                                     <---------ANAC46                  <---------ANAC58                                                   <---------ANAC58                  <---------ANAC58                                                   <---------ANAC58               <--------P                                                            <---------ANAC55(2)              <-------GAMYB                                                          --------->ANAC55(2)   <---------LBD16<---------ANAC46                                          ----------->GT1 --------->ARR14(2)         <-----------GT1          <---------TOE2(3) ---------->DOF2--------->LBD16 <---------ARR14(2)   <---------YAB1            --------->YAB1        --------->YAB1<---------LBD16 ------>YAB1  <---------ANAC58                 <---------YAB1         --------->AHL20(2) ------ATHB12 <---------ANAC58               --------->YAB1        --------->WOX13(1)<---------ANAC55(1) --->WOX13(1)<---------MYB46(3)------->GAMYB<---------YAB1        --------------->AGL15       ------- --ATHB12 <----------DOF2<----------DOF2<---------ANAC46          <---------------AGL15----------->HVH21   tcatattcgggtctttggttgcttatgctttaaccgaatgtgtcttataatcatagaggttttttctgccaattaaagtggtaatttccgtgaccataac  12975700                 --------->ANAC58                 --------->ANAC58               <---------ARR14(2)               --------->ARR14(2)      --------->ATHB12                                                        -----------------------      <---------ICU4                                                         <------ZmHOX2a(1)      -------->HAHB4                                                       <---------TOE2(3)      --------->YAB1                                                  <---------AHL20(2)     <---------ATHB12                             <---------ZAT18    --------->AHL20(2)     --------->ICU4                               --------->ZAT18 <---------AHL20(2)    <---------TOE2(3)                        <---------ANAC58     --------->AHL20(2)                -  <---------AHL20(2)  --------->ANAC46       <---------ANAC58    --------->ICU4                     < --------->AHL20(2) <---------ALFIN1     <----------DOF2         <---------AHL20(2)    ----------->GT1 -->MYB52(1)<------ZmHOX2a(1)       ---------->DOF2      --------->YAB1   --------->YAB1           --   agatttaatgatgaggagaaccccactcgacaacttaataaagcttttcttgtccacaatcacagaaattatttaatgaggatgagaaatagaaaaacag  12975800  Previous    Next  AGI:  At2g30430.1    Description:  unknown protein Range:  from: 12975253    to: 12975489    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g30432.1    Description:  TCL1 (TRICHOMELESS1); DNA binding. similar to DNA binding [Arabidopsis thaliana] (TAIR:AT2G30424.1); similar to Myb-related TRIPTYCHON-like protein [Vitis vinifera] (GB:ABW34395.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 12975692    to: 12977286    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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