Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    ------>ZmHOX2a(2)                                                 <------ZmHOX2a(2)                                                <---------ARR14(2)                                                --------->AGP1  <-----------HVH21                                                <---------ARR14(3)                                                --------->ARR14(3)                     >>>>>>>>>>DREB1A           <---------ARR11(3)      --------->YAB1                    <---------ETT(1)            --------->ARR14(2)     <---------ZAT6            --------->ANAC55(2)                 --------->ARR11(3)  --------->ICU4            <---------ANAC55(2)               ----------->ARR10<------MYB83          <-----------GT1                 --------->CCA1(2)    <------MYB46(1)    --------->GLK1(2)>>>>>>>>>>DREB2A <---------HSFB2a(2)     --------->MYB59   gaagagaatttgttacctattaccgacaagtctgtacattcgagagatgagatcttcttcttgttcggtcatactgataaactcccattcgatgctactc  12968800                                                          ----------->TGA1                                                          ----------->HVH21               XXXXXXXXXXX                                                   <---------AHL20(2)              <---------ZAT6                                              --------->ARR11(3)               <---------ZAT14                                              <---------ARR11(3)               --------->REM1(2)               <---------ANAC58             ----------->GT1------>NtERF2       --------->ZAT14               <---------ANAC58    <---------AHL20(2)   <---------At4g35610 <---------ANAC46               <---------ANAC46    --------->AHL20(2)<-----------GT1 <------ZmHOX2a(1)  --------->ICU4     <----------DOF2 <-----------GT1<---------AHL20(2)<---------TOE2(3) <------ZmHOX2a(1)<---------AHL20(2)   acttctgcatttttgtttcgttttatccaaacaaaaattaaatgagaagataatttaacgctgacgagttaggaggatgagtgtagagtaatgaattgaa  12968900                                                                                      --------->TOE2(3)                                                                                   <-----------GT1                                                                             ----------->GT1                                                                             <------MYB46(1)                                                                             <------MYB83                             <---------ZAT14                                --------->MYB46(2)                             --------->ZAT18                                --------->MYB111(2)                             --------->ZAT14                                <---------AtMYB61                             <---------ZAT18                                <---------MYB46(3)                        ------>ZmHOX2a(2)                 ------>NtERF2     --------->MYB111(1)                <---------ARR14(2)                       ----------->HVH21 <--------P --------->TOE1(3)                --------->ARR14(2)                   --------->SPL7        <---------MYB55(1)  <-----  <---------ARR11(3)  --------->ARR14(2)            <---------PCF2        <-------GAMYB  <---------ICU4  --------->ARR11(3)  <---------ARR14(2)            <---------PCF5       <---------MYB46(3)    ------ XXXXXXXXX>MIR159B<---------LBD16                  ----------->HVH21  ------------>AtMYB77   --------   gagagaccttcagagtcatatcgggatcgagtgaacttagtttgcctaagactgggaccgcgacgaagacgaagacggttggtattatccataactactg  12969000                                                                          --------->CCA1(2)                                                                     ---------->DOF2                                                               --------->CCA1(2)                                                              <---------ARR11(3)                                                              --------->ARR11(3)          -----------                                                            --------->ANAC58   ----------->GT1 ----HSFB2a(2)                                              --------->ANAC58--------->ALFIN1        - --->HSFB2a(2)                 --------->GLK1(2)           <---------------AGL15     --------->AHL20(2) ->MYB52(1)       --------->AHL20(2)         <---------ZAT6--------------->AGL15----------->GT1  <---   gaaaatagaagaatattagataaatttacagagaaactgaaaatgtagagtttggagaatgcaagatatagaaaagatgtgagggaaaaaaatagttata  12969100                                 --------->ATHB12                          <---------AHL20(2)                       <---------YAB1                         <---------AHL20(2)                      --------->YAB1                         --------->AHL20(2)                     --------->AHL20(2)                   --------->ANAC55(2)                     ------>ZmHOX2a(1)                   <---------ANAC55(2)                    --------->TOE2(3)                   <------MYB83 <---------YAB1      --------->ARR11(3)                   ----------->GT1                  <---------ARR11(3) >GT1              <------MYB46(1)                 <---------CCA1(2)    <-----------GT1 --------->DOF2  --------->CCA1(2)             <---------ANAC46 <---------AHL20(2)                <-- ------AHL20(2)--------->CCA1(2)<---------AHL20(2)------->TEIL --------->AHL20(2)     --------->AHL20(2)   taaaaagagagagagagagataggtgatttattttttattggaatttctacgtatatattcctaaatttataattcacatttttgtttttatatatcccg  12969200             --------->YAB1      --------->TOE2(3)                                                                  <---------GLK1(2)     --------->ANAC58        --------->TOE1(2)                                           <---------ARR14(2)     <----------ID1  --------->ANAC55(2)                                                 --------->ARR11(3)     <---------ANAC55(2)   <-------TEIL                                     --------->AHL20(1)     --------->ANAC58<---------ANAC58                                       <---------AHL20(1)     --------->ANAC46<---------ANAC55(2)                --------->DAG2      <---------AHL20(2)  <---------ARR14(2) <---------ANAC58                  ---------->DOF2 ------------>CBF----------->ARR10  --------->ARR14(2) <---------ANAC46         <---------YAB1    <---------ICU4    <---------YAB1 ----ZmHOX2a(2) <---------ICU4         *TSS <-----------GT1 <-------TEIL    --------->AHL20(2)     --   atcgaatacgtcaaaacataatttcgtgatacgttcgatttgttttttactattccaaaaagttcataatgctcacaataaattttgatcagattttgtt  12969300                                                                               ----------->GT1                                                                        <---------AHL20(2)          -                                                                  --------->ANAC55(2)               <                       ------->GAMYB                              <---------ANAC55(2)          ------                      --------->ZAT6                <---------AHL20(2)  --------->AHL20(2)     ------                    <-----------GT1  <---------ANAC46             ----------->GT1              ------                   <-----------GT1   <---------ANAC58             <---------ANAC46            <------ --------->HVH21  --------->AHL20(2) <---------ANAC58             <---------ANAC55(1)         -------   tctgacctataacagaacattttaacagtcactaaaatggcgtgctagttttatttttttgcctagtaacgtattaaaatcgagtgaaaaacatcacatg  12969400                            --------->ANAC58                            --------->ANAC58                            --------->ANAC46                            --------->ANAC55(1)                            --------->ANAC55(2)                      <---------YAB1 -------->ARR14(2) <---------YAB1 ---------ARR14(2)--------->AHL20(1)              <---------AHL20(2)                         -------- --->AtLEC2      <---------ICU4                  --------->AHL20(2)                        <---------SPL7 --->ANAC58     --------->ICU4            <---------ARR11(3)     ---------->ID1          <---------LBD16 --->ANAC58   --------->YAB1<---------ANAC55(2)  <---------AHL20(2)<----------DOF2      <-----------GT1 -MYC3       --------->AHL20(2)     ------>ZmHOX2a(1)           <-----------GT1      <---------ICU4 >MYC3       <---------ATHB12      --------->TOE1(2)    <-----------GT1             --------->ICU4   caaatacacttctcaataaatattatgaacacgtaatcctacaagttctaatttaaaatcacagtttttctttttatattttagaaatttttacggacgg  12969500                                   --------->AHL20(2)                                   <---------AHL20(1)                                   --------->AHL20(1)                                   <---------AHL20(2)                               --------->YAB1                                  --------->LBD16                         --------->GLK1(2)                                    --------->ANAC46                      <XXXXXXXXXXXXXXXXXXXXMIR4243                           --------->LBD16                    ------->TEIL  --------->AHL20(2)          ----------->GT1--------->HSFB2a(2)                    <-------TEIL  <---------AHL20(2)          <------MYB46(1)<---------HSFB2a(2)                <---------------AtSPL3                        <---------ANAC55(2)    <-----------GT1                <---------------AtSPL8                 --------->YAB1       --------------------->WRI1                --------------->AtSPL8    <---------At5g28300 <------MYB83  <---------LBD16  <------- ->SPL7         --------------->AtSPL3   <-----------GT1      <---------ANAC46--------->LBD16--------   agatggctgtggaatgtggatgtacataatctataattttattttacagttctccaataacattaggtgaaattttttccccgaaattttcgacttcgtg  12969600                                      <---------ANAC46                                      ----------->GT1                                 <---------ANAC58                                 <---------ANAC58                                 <---------ANAC55(1)               --------->ZAT6                         --------->At5g28300                     --------->YAB1                <-------TEIL     <---------ANAC46         ----------->GT1                         <--   <----------ID1       ----------->GT1                   <---------ANAC46                        <-- --ANAC46   --------->DAG2<---------MYB52(1)          <---------MYB46(3)                 <----------DOF2 --->GT1   ---------->DOF2--------->DOF5.7(2)      <-----------RAV1(1)           ----------->RAV1(1)   aaaattggacaaaaaaagtccataaaccgttaatttcgtgttgtgatatagatttgtgggtcgtaaataatactagcaaaatccaacaaaacttttgttt  12969700  Previous    Next  AGI:  At2g30420.1    Description:  myb family transcription factor. similar to DNA binding [Arabidopsis thaliana] (TAIR:AT2G30424.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77791.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 12967904    to: 12969239    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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