Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   --------->At4g35610                 --------->At4g35610                              <------ZmHOX2a(1)     <---------------------WRI1--------->ANAC58               <---------At4g35610      --------->ICU4            <---------ZAT2   <---------ATHB12               --------->At4g35610      ----------->GT1           <---------At4g35610 ------->TEIL             <---------bZIP60(1)<XXXXXXXXXXXXXXXXXXXXMIR1886.3 ---------->DOF2--------->ANAC58   --------->At4g35610      <---------TOE2(3)   <---------------AtSPL8     ---------->DOF2 ------ZmHOX2a(1)      --------->MYB52(1)    ---------->DOF2 --------->MYB46(3)    --------->ICU4----   gaggaagatgaaatggcatcagagataactgaggaagatgaaatgtttaaagggttcgaagtaaccaaagctgctctcaaaggcaatgaatgtttcccaa  12960800                                                                           ----------->GT1                                                                 ------>ZmHOX2a(2)                                                               <---------ARR14(2)                                                               --------->ARR14(2)                                                               <---------ARR11(3)                                                <---------ANAC46<------ZmHOX2a(2)                                              --------->ZAT18  <-----------ARR10                                   ----------->GT1             --------->ARR11(3)                               ---------->DOF2--------->ZAT14  --------->AGP1                            <---------------AGL15         ----------->RAV1(1)   <---------DEAR3(2)       --------------->AGL15  <---------ZAT18<----------DOF2 ------>DOF2     --------->At4g35610          <---------ZAT14  <---------AGP1<---------MYB52(1)   gaagccggtttgatgaagtagcagcaaatgcttcaaagggtaatcttgtgcagtgcataacaacagatctttgtgaatcgttactcaattgtggcaagag  12960900                                                                 --------->YAB1                                                                 <---------ICU4               -------                                                                --------->ICU4                -------                                                              --------->YAB1                <------ZmHOX2a(1)                                                  --------->MYB52(1)                       <---------                                  --------->At4g35610        <---------YAB1              <------ZmHOX2a(1)                         --------->ZAT6          ----------->HVH21                     --------->ALFIN1                        <---------ZAT14        --------->At4g35610              <---------LBD16                        --------->ZAT18    --------->ALFIN1--------->YAB1      --------->MYB52(1)            --------->YAB1     <---------ATHB12<---------At4g35610 <---------YAB1     <------ZmHOX2a(1)   tctgcatataacaacaataaacagagaacactaatcagttgcaatgtggagctaacagagattataatcatcatccaaaacttacggaggaggaggacga  12961000                                                                                                 ----                                                                                              -------                                                                                           --------->ANAC58                                              <---------ANAC58                             --------->ANAC46    <---------ANAC46     >>>>>>>>>TBF1        <---------ANAC58                             --------->ANAC58 -->ANAC58           <------ZmHOX2a(1) <---------RAP2.6(3)                               ---------->DOF2 -->ANAC58   >>>>>>>>>TBF1             <-----------HVH21        ---------->DOF2       --------->TOE1(3) -ID1    <------ZmHOX2a(1)     <------ZmHOX2a(1)        --------->ATHB12              --------->TOE2(3)   aacgttgagtaggaagaagaagaggaagaagaaggagaagcagtcatggctgggcaattcattgcaaaaagattgaaacttgaagaaaccttaacgcaac  12961100                  --------->STY1(2)                  <---------STY1(2)                                 --------->YAB1              --------->ZAT2       --------->YAB1                   --------->WOX13(1)    --------->ARR14(2)     <---------ARR11(3)                      *TSS--------->YAB1       ---------    <---------ARR14(2)     --------->ARR11(3)                    --------->TOE2(3)      ----------->GT1 ----->ATHB12 --------->At4g35610  --------->AHL20(2)       <---------AHL20(2)      <---------ZAT2--- -->MYB52(1)<------ZmHOX2a(1)      <---------AHL20(2)  <---------AHL20(2)           --------->ZAT2===   gatttggatttggaggagctagctacaaaaatctcatttatatttcttcgaatttgttttattttttcattaatcagaccagacacagttgggataaaat  12961200                                        <---------ALFIN1                                        --------->ANAC46                                       <---------REM1(2)                                     --------->ZAT18                                 <-------MYC4                                 <-------MYC3                                 -------->ABF1                                 <-------MYC2                                 ------->MYC2                                 ------->MYC4                                 ------->MYC3                                --------->ANAC55(2)                                <---------ANAC55(2)                                <---------O2                                --------->ANAC46                        <---------AHL20(2)                                <---------TGA1a                        --------->AHL20(2)                                --------->O2                           <---------AHL20(2)         ---                                --------->TGA1a            <---------AHL20(2)                   -----                  <------ZmHOX2a(1)  <---------ZAT18    <---------AHL20(2)                      -----      ====================================bZIP_DOF      --------->AHL20(2)                      -----      <----------DOF2          ------------>OsbHLH66   --------->AHL20(2)                     <------     <---------ANAC58         <------------OsbHLH66    <---------AHL20(1)                   <------MYB83     <---------ANAC58       --------->AtMYB61          <---------AHL20(2)                   <------MYB46(1)     <---------ANAC46      --------->MYB46(3)      --------->ICU4      --------->YAB1       --------- >AHL20(2) <------ZmHOX2a(1)<---------ALFIN1     --------->YAB1        <---------AHL20(1)  --------->MYB59 ------->DOF2 --------->ALFIN1<---------ALFIN1  <---------YAB1      --------->YAB1         --------->MYB46(2) =========================================bZIP_DOF <---------YAB1 ------------>CBF --------->CCA1(2)<   gaaaggggcttgaggagtgaggacggagaaccacacgtgtccacacagttgtgataatttttttattcaacaataaaattgcaagagacgagtttggtaa  12961300      <-------GAMYB   <---------LBD16 --------->ARR14(2) <---------ARR14(2)          <---------WRKY18(1) ------>AHL20(2)            --------->WRKY38(1) ------>GT1             <---------MYB52(1) ---->ANAC58      ----------->HVH21                                                       --------->TOE1(3) ---->ANAC58     --------->DEAR3(2)                                                       --------->TOE2(3) --P --------->LBD16--------->MYB52(1)                   <---------REM1(2) --------->TOE2(3) -->GT1        <-----------HVH21                 --------->YAB1            <----------DOF2--------->TOE1(2) ---------GLK1(1)--------->SPL7-------->ZAP1  <----------DOF2              --------->TOE1(3)   ------   gtaaatccggttgaaccggtccgaccggtattgaccgaaacatacaatcttttatagtcttcacacattgttcccaactttaaacttagaaaccttagat  12961400                                                                              ------>ZmHOX2a(2)                                                                             <------ZmHOX2a(2)         <--------ATHB1                                                     --------->AGP1         -------->ATHB1                                                     --------->ARR11(3)         <---------ICU4              <-------TEIL                           <---------ARR11(3)         --------->ATHB51           --------->CCA1(2)                       <---------AGP1         --------->YAB1            --------->ARR14(2)                       --------->ARR14(2)        <---------ATHB51     ----------->HVH21                              <---------ARR14(2)        --------->ICU4  --------->ANAC58                              <-----------GT1    --------->At4g35610        <---------ATHB12--------->ANAC58                             --------->AHL20(2)  ----------->RAV1(2) --->ARR11(3)<-----------HVH21     <---------ARR14(2)               --------->AHL20(2)   <---------At4g35610   gttgtattcaataattgtcaaaccacaagtactgacagatacagatttaaaacatttttgttttgatcaatttaactagatctgttcattcacctgaaaa  12961500                                                                       ------->GAMYB ------>ZmHOX2a(1)                    --------->AHL20(2)                       --------->GLK1(2)   --------->ARR14(2)           --------->GLK1(1)                      <------ZmHOX2a(1) ----------->RAV1(1)        <-----      <---------ZAT14  --------->ARR11(3) --------->YAB1    <---------GLK1(2)    <---------ARR14(2)      --------->ZAT14  <---------ARR11(3)<---------ATHB12 <---------YAB1       ----------->ARR10   caagtctctacagagttctccataaaatcttgagacaagttcaatgaagacaggactcttaagattcttccaacagaagagaagttcctctatgtccatt  12961600                                                             --------->YAB1                                                           --------->ANAC58                                                           --------->ANAC58                                 ------->TEIL              --------->ANAC46                            --------->At4g35610        <---------HSFB2a(2)                       <---                       --------->WOX13(1)              --------->HSFB2a(2)                       <---          <-----------GT1   <---------At4g35610   --------->HSFC1(2)  --------->ANAC46           <---         <-----------GT1  --------->YAB1          <---------HSFC1(2)<---------ALFIN1     ------->TEIL ----MYB52(1)         --------->MYB46(3)       ---------->DOF2 --------->At4g35610      <---------CCA1(2)   aagtcatctattttcccttcttcaacaatcagatgaatcagatagttttcaaagcttctacaagcatcttccacagcattgtcttcaaatgtatctcttg  12961700  Previous    Next  AGI:  At2g30390.1    Description:  ferrochelatase II. Identical to Ferrochelatase-2, chloroplast precursor [Arabidopsis Thaliana] (GB:O04921;GB:O23623;GB:Q7GB39); similar to FC1 (FERROCHELATASE 1), ferrochelatase [Arabidopsis thaliana] (TAIR:AT5G26030.2); similar to FC1 (FERROCHELATASE 1), ferrochelatase [Arabidopsis thaliana] (TAIR:AT5G26030.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO71607.1); similar to ferrochelatase [Nicotiana tabacum] (GB:CAC50871.1); similar to ferrochelatase [Cucumis sativus] (GB:BAB20760.1); contains InterPro domain Ferrochelatase; (InterPro:IPR001015) Range:  from: 12958104    to: 12961167    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g30395.1    Description:  ATOFP17/OFP17 (Arabidopsis thaliana ovate family protein 17). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G06923.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21322.1) Range:  from: 12961251    to: 12962166    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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