Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            --------->TOE2(3)                                                                                        --------->ARR14(2)                                                                                        <---------ARR14(2)                                                                                        <---------ARR11(3)                                                                                        --------->ARR11(3)                                                                                        <-----------ARR10                                                                                        <---------ARR11(1)                                                                                       <---------GLK1(1)                                                                                       --------->GLK1(1)                                                                                   --------->ANAC58                                                                                   --------->ANAC58       --------->AHL20(2)                                                          --------->ANAC46       <---------AHL20(2)                                                        <---------ALFIN1      --------->AHL20(2)   <------ZmHOX2a(1)                                --------->ANAC58 -----TOE2(3)    ----------->GT1                                            --------->ANAC58     ---- ----DOF5.7(2) <---------ANAC58                                         --------->YAB1 <---------CCA1(2) ->DOF5.7(2)   <---------ANAC58          ---------->DOF2     --------->TOE2(3) ----------->RAV1(1)   cgaggctatttattttgtcttgttaattaggagcaaaattttaaaaagaagaatataaacaaacctcattccaatgttaagcaacacgcatatcttagag  12955000                                                                     --------->ZAT18                                                                     <---------ZAT18                                                            --------->At4g35610                                        <---------ANAC58    <---------At4g35610                                        <---------ANAC58 <---------At4g35610 ------------>CBF                                     <-------PIF5    <----------DOF2 <---------ZAT14       ---------->DOF2               ------->PIF5   <---------ANAC58 --------->ZAT14   ----------->GT1 ------>DOF2                       ------>ZmHOX2a(1)<---------ANAC58<---------ZAT6   <-----------RAV1(2)   aaagaagcacaaaggctcaaactttggcacttccttcctcgtgcttagcttcttgctttggctgctactagtgtacaaaaacaataaacaggtgattttg  12955100                                            <------------CBF           --------->MYB52(2)             <---------YAB1           <---------MYB46(3)         <----------DOF2                <----------DOF2          <---------TOE1(2)        <---------ARR11(3)             ------->TEIL         <---------MYB52(1)        --------->ARR11(3)            <---------CCA1(2)                  -       <---------ANAC58         ----------->GT1            --------->ATHB12                    <-----       <---------ANAC58    --------->AHL20(2)              <---------ICU4                <---------ANAC58    <----------DOF2        <---------AHL20(2)             <---------YAB1                 <---------ANAC58   ttttgtctttcgtttgttctctctatcgtttaaatggtatctttcttattgttcttgttcatcatttgaatctttatgctctgttcttctagcttagctt  12955200                                                        <---------YAB1                                                      <----------DOF2           ------------>CBF                                           <---------ANAC58                    <-----------GT1                                           --------->ANAC55(2)             --------->ARR11(3)                                           <---------ANAC58                --------->ARR14(3)                                           <---------ANAC55(1)             <---------ARR14(2)                                           <---------ANAC46         <------------CBF                                  --------->ATHB12   <---------ANAC46      <---------ARR11(3)                                 <---------ATHB12    <---------ANAC58      <---------ARR14(3)         <-----------GT1       --------->WOX13(1)    <---------ANAC58      <---------GLK1(2)        < -------->ANAC55(2)   ----------->GT1      <---------ANAC55(2) <---------------AGL15          ------- -----DOF2 ------------>CBF  ------------>CBF<---------ZAT6    --------------->AGL15  <----------DOF2   tcacgtttttttgaccaatttgatcagtaaaatcaatgaatggtttcgtgttatggctttgattactaaaaattgaagattttgcaatcttttagggatt  12955300                           <---------MYB46(3)                       <-----------RAV1(1)                                       <------ZmHOX2a(2)                 <----------DOF2                                       ----------->GT1              ------->TEIL <------MYB83                <---------WRKY12<---------MYB46(3)          --------------->AtSPL8       <---------TOE2(3)             <-------GAMYB          <---------------AtSPL8       <---------TOE1(3)            <---------ANAC46   <-------TEIL          <---------------AtSPL3--------->MYB59        <---------WRKY38(1)      --------->ARR11(3)         <------------CBF  <------MYB46(1)     <<<<<<<<<TBF1 ------------>CBF   <---------ARR11(3) -- ----------DOF2 <---------DAG2  <---------TOE1(3)     ------------>CBF<---------MYB52(1)           <- -->ARR14(2) <-----------GT1    <---------TOE2(3)     --------->WRKY18(1)   ---------->DOF2        --   ttctttaacaagattgtacctttttttgttggtttaggtttagggtttcttcttcagtcaatggacaatgccgttgttaaaagatcaagtccatcttcga  12955400                                                                                                  ---                                                                                              <------                                                                                        ------>ZmHOX2a(2)                                                      --------->ALFIN1                 <------ZmHOX2a(2)                                                    <---------ANAC58                  <---------ARR14(2)                                                    <---------ANAC46                  --------->AGP1                                                    <---------ANAC58                  --------->ARR14(2)                                              --------->ATHB12                        <---------ARR11(3)                                             <-------TEIL                             --------->ARR11(3) ------->AHL20(1)         ---------->DOF2   <------ZmHOX2a(2)----------->HVH21        <---------ARR14(3) --------ARR11(3)    <---------ZAT18        >>>>>>>>>>>>>>>>>LFY   ---------->DOF2    --------->ARR14(3) ------->ARR11(3)    --------->ZAT18       --------->AGP1  ----------->RAV1(2)      ----------->ARR10   atatatcagaagttatctccaagttcgctaaagtctgcaaatttagatccattggtgtgttccctgaccaaaagtccaattcgaatgagatcttggtgga  12955500                                                                                            <--------                                                                                            <--------       ---------->DOF2                                      <----------DOF2               --------->HSFC1(2)  --------->DAG2                                   <--------ATHB1                  --------->GLK1(1) ---------->DOF2                 <---------ATHB12  --------->ATHB12               --------->ARR11(3) ------>YAB1                   --------->WOX13(1) --------->ICU4                  <---------ARR11(3) ---MYB46(3)     ----------->ARR10--------->YAB1  <---------ATHB12      --------->ICU4    <---------HSFC1(2)   tgataaagcaaaagaaactgagatttgtgatttcaatcacaaaccctcttcaatgattcaaacttttagttgggatgatggtgagatatcgaagcttttc  12955600                         <-----------ARR10                         <---------ARR11(1)                            --------->ATHB12                         --------->ARR14(2)                           <------ZmHOX2a(2)                         --------->ARR11(3)                          --------->ARR11(3)                         <---------ARR14(2)                     <<<<<<<GRF7---------->DOF2                         --------->GLK1(2)                    ------>ZmHOX2a(1)                         ------->TEIL                         ===============HOX2a_HOX2a                        <---------ARR14(1)                  ------>ZmHOX2a(2)               <--------                        <---------CCA1(2)                 <---------ARR11(3)  <---------At4g35610                      <---------ANAC58                    --------->ARR11(3)  --------->At4g35610 -DAG2                <---------ANAC46                  <---------YAB1<---------YAB1        <-------- --DOF2               <---------ANAC58              <---------DAG2   <---------ARR11(3)   <----------   gacattgtttcatcgcttaagctagcgtatcttgagtttcaacaagctcatttgccttatgatcctgacaagatcattgaagcagacaacctcgtcgtgt  12955700                                                          ---------->DOF2                                                        ------->GAMYB                                                       --------->ANAC58 --------->ZAT2                                        --------->ANAC58 <---------ZAT2                                        --------->ANAC46                             < --------->At4g35610                                ---------->CDC5                          <------MYB46(1) <---------At4g35610                             <---------At4g35610                        <-------- -ANAC58                                         --------->At4g35610           <----------DOF2      - -ANAC58            --------->GLK1(2)         ---------->DOF2                <---------At4g35610  --- -HVH21   <----------DOF2          --------->TOE2(3)<---------WRKY38(1)   <---------At4g35610<------MYB83   ctcagctcgaggctttacgaagaatcaagcgtctctatctcaaaacgatacagctcaacgcaaagaagaccgagattgctgcttcttgtttggataggtt  12955800                                                             <------ZmHOX2a(1)                                                <---------TGA1a         <-------TEIL                                                =========================================bZIP_DOF --------->CCA1(2)     --------->ANAC58         --------->TGA1a        --------->CCA1(2) ---------ARR11(3)     --------->ANAC58 ==================bZIP_DOF    XXXXXXXXXXXXXXXXXXXX>MIR1886.2 -AtMYB61             XXXXXXXXXXXXXXXXXXXX>MIR395B/C/F     <---------TOE2(3) -------->ARR11(3)    XXXXXXXXXXXXXXXXXXXX>MIR395A/D/E <---------At4g35610            <---------TOE2(3) -------->ARR10    --------->YAB1       ---------->DOF2--------->At4g35610    <----------DOF2     ---   gagatatgagattgaagtgaatgagaagcatttggagaaacttaaagcacaagtgagagctaaggagagtgagatacactctttgattaagaaacaagaa  12955900  Previous    Next  AGI:  At2g30380.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G45260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21323.1); contains InterPro domain Protein of unknown function DUF641, plant (InterPro:IPR006943); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 12955361    to: 12957650    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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